RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 TRIM47Q96LD4 638 aa16.14■□□□□ 0.17
HDAC8-217ENST00000478743 RNF208Q9H0X6 261 aa16.14■□□□□ 0.17
HDAC8-217ENST00000478743 ZMYND8Q9ULU4 1186 aaPredicted RBP16.14■□□□□ 0.17
HDAC8-217ENST00000478743 ZNF804BA4D1E1 1349 aa16.14■□□□□ 0.17
HDAC8-217ENST00000478743 MGAMO43451 1857 aa16.14■□□□□ 0.17
HDAC8-217ENST00000478743 OSBPP22059 807 aa16.13■□□□□ 0.17
HDAC8-217ENST00000478743 ATP2B4P23634 1241 aa16.13■□□□□ 0.17
HDAC8-217ENST00000478743 GRK4P32298 578 aa16.13■□□□□ 0.17
HDAC8-217ENST00000478743 ANKRD13DQ6ZTN6 518 aa16.13■□□□□ 0.17
HDAC8-217ENST00000478743 ANKRD13AQ8IZ07 590 aa16.13■□□□□ 0.17
HDAC8-217ENST00000478743 NKX2-3Q8TAU0 364 aa16.13■□□□□ 0.17
HDAC8-217ENST00000478743 JARID2Q92833 1246 aaPredicted RBP16.13■□□□□ 0.17
HDAC8-217ENST00000478743 UNC93B1Q9H1C4 597 aa16.13■□□□□ 0.17
HDAC8-217ENST00000478743 RIPOR2Q9Y4F9 1068 aa16.13■□□□□ 0.17
HDAC8-217ENST00000478743 RPTORQ8N122 1335 aa16.13■□□□□ 0.17
HDAC8-217ENST00000478743 MYO3BQ8WXR4 1341 aa16.13■□□□□ 0.17
HDAC8-217ENST00000478743 TLR2O60603 784 aa16.12■□□□□ 0.17
HDAC8-217ENST00000478743 IREB2P48200 963 aaKnown RBP16.12■□□□□ 0.17
HDAC8-217ENST00000478743 LRIT3Q3SXY7 679 aa16.12■□□□□ 0.17
HDAC8-217ENST00000478743 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.12■□□□□ 0.17
HDAC8-217ENST00000478743 CERS5Q8N5B7 392 aa16.12■□□□□ 0.17
HDAC8-217ENST00000478743 DIS3LQ8TF46 1054 aaKnown RBP16.12■□□□□ 0.17
HDAC8-217ENST00000478743 SRRDQ9UH36 339 aa16.12■□□□□ 0.17
HDAC8-217ENST00000478743 TSPYL4Q9UJ04 414 aa16.12■□□□□ 0.17
HDAC8-217ENST00000478743 BMP8BP34820 402 aa16.11■□□□□ 0.17
HDAC8-217ENST00000478743 CHPF2Q9P2E5 772 aa16.11■□□□□ 0.17
HDAC8-217ENST00000478743 PPP2R3BQ9Y5P8 575 aa16.11■□□□□ 0.17
HDAC8-217ENST00000478743 LAMA2P24043 3122 aaKnown RBP16.1■□□□□ 0.17
HDAC8-217ENST00000478743 UNCXA6NJT0 531 aa16.1■□□□□ 0.17
HDAC8-217ENST00000478743 BTBD19C9JJ37 291 aa16.1■□□□□ 0.17
HDAC8-217ENST00000478743 SYN1P17600 705 aa16.1■□□□□ 0.17
HDAC8-217ENST00000478743 VGLL4Q14135 290 aa16.1■□□□□ 0.17
HDAC8-217ENST00000478743 C7orf61Q8IZ16 206 aa16.1■□□□□ 0.17
HDAC8-217ENST00000478743 PLBD2Q8NHP8 589 aa16.1■□□□□ 0.17
HDAC8-217ENST00000478743 CFAP53Q96M91 514 aa16.1■□□□□ 0.17
HDAC8-217ENST00000478743 VEZTQ9HBM0 779 aa16.1■□□□□ 0.17
HDAC8-217ENST00000478743 NUDCQ9Y266 331 aa16.1■□□□□ 0.17
HDAC8-217ENST00000478743 GTF2IP78347 998 aa16.09■□□□□ 0.17
HDAC8-217ENST00000478743 KIF22Q14807 665 aa16.09■□□□□ 0.17
HDAC8-217ENST00000478743 DLGAP5Q15398 846 aa16.09■□□□□ 0.17
HDAC8-217ENST00000478743 TTLL5Q6EMB2 1281 aa16.09■□□□□ 0.17
HDAC8-217ENST00000478743 RAET1EQ8TD07 263 aa16.09■□□□□ 0.17
HDAC8-217ENST00000478743 FAM161BQ96MY7 647 aa16.09■□□□□ 0.17
HDAC8-217ENST00000478743 CPA4Q9UI42 421 aa16.09■□□□□ 0.17
HDAC8-217ENST00000478743 MYPNQ86TC9 1320 aa16.09■□□□□ 0.17
HDAC8-217ENST00000478743 A0A1B0GUL6 1792 aa16.08■□□□□ 0.17
HDAC8-217ENST00000478743 SGPL1O95470 568 aa16.08■□□□□ 0.16
HDAC8-217ENST00000478743 MAGEA10P43363 369 aaPredicted RBP16.08■□□□□ 0.16
HDAC8-217ENST00000478743 PSMC4P43686 418 aa16.08■□□□□ 0.16
HDAC8-217ENST00000478743 PRMT2P55345 433 aa16.08■□□□□ 0.16
HDAC8-217ENST00000478743 RASA3Q14644 834 aa16.08■□□□□ 0.16
HDAC8-217ENST00000478743 SUPT20HL1Q3ZLR7 823 aa16.08■□□□□ 0.16
HDAC8-217ENST00000478743 PRMT6Q96LA8 375 aaPredicted RBP16.08■□□□□ 0.16
HDAC8-217ENST00000478743 DDX60LQ5H9U9 1706 aaKnown RBP16.08■□□□□ 0.16
HDAC8-217ENST00000478743 F8W031 263 aaPredicted RBP16.07■□□□□ 0.16
HDAC8-217ENST00000478743 GTF2A2P52657 109 aa16.07■□□□□ 0.16
HDAC8-217ENST00000478743 PRKCZQ05513 592 aa16.07■□□□□ 0.16
HDAC8-217ENST00000478743 NFE2L2Q16236 605 aa16.07■□□□□ 0.16
HDAC8-217ENST00000478743 CFAP100Q494V2 611 aa16.07■□□□□ 0.16
HDAC8-217ENST00000478743 C17orf99Q6UX52 265 aa16.07■□□□□ 0.16
HDAC8-217ENST00000478743 ANKRD18AQ8IVF6 992 aa16.07■□□□□ 0.16
HDAC8-217ENST00000478743 TDHQ8IZJ6 230 aa16.07■□□□□ 0.16
HDAC8-217ENST00000478743 PLEKHF1Q96S99 279 aa16.07■□□□□ 0.16
HDAC8-217ENST00000478743 COA1Q9GZY4 146 aa16.07■□□□□ 0.16
HDAC8-217ENST00000478743 BIN2Q9UBW5 565 aaPredicted RBP16.07■□□□□ 0.16
HDAC8-217ENST00000478743 GABRQQ9UN88 632 aa16.07■□□□□ 0.16
HDAC8-217ENST00000478743 MINPP1Q9UNW1 487 aa16.07■□□□□ 0.16
HDAC8-217ENST00000478743 ADGRA2Q96PE1 1338 aa16.07■□□□□ 0.16
HDAC8-217ENST00000478743 MYH3P11055 1940 aa16.07■□□□□ 0.16
HDAC8-217ENST00000478743 IRS2Q9Y4H2 1338 aa16.06■□□□□ 0.16
HDAC8-217ENST00000478743 SPDYE2BA6NHP3 402 aa16.06■□□□□ 0.16
HDAC8-217ENST00000478743 GNRH1P01148 92 aa16.06■□□□□ 0.16
HDAC8-217ENST00000478743 SPDYE6P0CI01 402 aa16.06■□□□□ 0.16
HDAC8-217ENST00000478743 CCT4P50991 539 aaKnown RBP16.06■□□□□ 0.16
HDAC8-217ENST00000478743 CCDC152Q4G0S7 254 aa16.06■□□□□ 0.16
HDAC8-217ENST00000478743 MTMR14Q8NCE2 650 aa16.06■□□□□ 0.16
HDAC8-217ENST00000478743 PAWRQ96IZ0 340 aaKnown RBP16.06■□□□□ 0.16
HDAC8-217ENST00000478743 CDH23Q9H251 3354 aa16.06■□□□□ 0.16
HDAC8-217ENST00000478743 TTC28Q96AY4 2481 aa16.05■□□□□ 0.16
HDAC8-217ENST00000478743 COL2A1P02458 1487 aaPredicted RBP16.05■□□□□ 0.16
HDAC8-217ENST00000478743 ZBTB38Q8NAP3 1195 aaPredicted RBP16.05■□□□□ 0.16
HDAC8-217ENST00000478743 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.05■□□□□ 0.16
HDAC8-217ENST00000478743 TEPSINQ96N21 525 aa16.05■□□□□ 0.16
HDAC8-217ENST00000478743 ELNP15502 786 aa16.04■□□□□ 0.16
HDAC8-217ENST00000478743 DEFB118Q96PH6 123 aa16.04■□□□□ 0.16
HDAC8-217ENST00000478743 SNCAIPQ9Y6H5 919 aa16.04■□□□□ 0.16
HDAC8-217ENST00000478743 FMNL1O95466 1100 aaPredicted RBP16.03■□□□□ 0.16
HDAC8-217ENST00000478743 PPP2R1AP30153 589 aa16.03■□□□□ 0.16
HDAC8-217ENST00000478743 PLA2G5P39877 138 aa16.03■□□□□ 0.16
HDAC8-217ENST00000478743 UBXN2AP68543 259 aa16.03■□□□□ 0.16
HDAC8-217ENST00000478743 JAG2Q9Y219 1238 aa16.03■□□□□ 0.16
HDAC8-217ENST00000478743 SPDYE5A6NIY4 337 aa16.02■□□□□ 0.16
HDAC8-217ENST00000478743 SNAP23O00161 211 aa16.02■□□□□ 0.16
HDAC8-217ENST00000478743 PDE8AO60658 829 aa16.02■□□□□ 0.16
HDAC8-217ENST00000478743 TFRCP02786 760 aaKnown RBP16.02■□□□□ 0.16
HDAC8-217ENST00000478743 MMP14P50281 582 aa16.02■□□□□ 0.16
HDAC8-217ENST00000478743 TRIM28Q13263 835 aaKnown RBP16.02■□□□□ 0.16
HDAC8-217ENST00000478743 POTEB2H3BUK9 544 aa16.01■□□□□ 0.15
HDAC8-217ENST00000478743 INHAP05111 366 aa16.01■□□□□ 0.15
HDAC8-217ENST00000478743 UBE2OQ9C0C9 1292 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms