RNA–Protein interactions for RNA: ENST00000478452.1

MMS19-215, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, human

TSL 2

Gene MMS19, Length 835 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MMS19-215	ENST00000478452	FKBP1A	P62942	108 aa	Known RBP	11.14	□□□□□ -0.63
MMS19-215	ENST00000478452	SUPT20HL1	Q3ZLR7	823 aa		11.14	□□□□□ -0.63
MMS19-215	ENST00000478452	NOM1	Q5C9Z4	860 aa	Known RBP	11.14	□□□□□ -0.63
MMS19-215	ENST00000478452	SPRYD7	Q5W111	196 aa		11.14	□□□□□ -0.63
MMS19-215	ENST00000478452	CERS5	Q8N5B7	392 aa		11.14	□□□□□ -0.63
MMS19-215	ENST00000478452	MTMR14	Q8NCE2	650 aa		11.14	□□□□□ -0.63
MMS19-215	ENST00000478452	PRMT6	Q96LA8	375 aa	Predicted RBP	11.14	□□□□□ -0.63
MMS19-215	ENST00000478452	CNNM1	Q9NRU3	951 aa		11.14	□□□□□ -0.63
MMS19-215	ENST00000478452	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.14	□□□□□ -0.63
MMS19-215	ENST00000478452	MANSC4	A6NHS7	340 aa	Predicted RBP	11.13	□□□□□ -0.63
MMS19-215	ENST00000478452	ANP32C	O43423	234 aa		11.13	□□□□□ -0.63
MMS19-215	ENST00000478452	FKTN	O75072	461 aa		11.13	□□□□□ -0.63
MMS19-215	ENST00000478452	RBM5	P52756	815 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
MMS19-215	ENST00000478452	CFAP100	Q494V2	611 aa		11.13	□□□□□ -0.63
MMS19-215	ENST00000478452	ZNF594	Q96JF6	807 aa	Predicted RBP	11.13	□□□□□ -0.63
MMS19-215	ENST00000478452	FZD1	Q9UP38	647 aa		11.13	□□□□□ -0.63
MMS19-215	ENST00000478452	PPP2R3B	Q9Y5P8	575 aa		11.13	□□□□□ -0.63
MMS19-215	ENST00000478452	CLRN2	A0PK11	232 aa		11.12	□□□□□ -0.63
MMS19-215	ENST00000478452	UNCX	A6NJT0	531 aa		11.12	□□□□□ -0.63
MMS19-215	ENST00000478452	GRM8	O00222	908 aa		11.12	□□□□□ -0.63
MMS19-215	ENST00000478452	MAP3K11	Q16584	847 aa		11.12	□□□□□ -0.63
MMS19-215	ENST00000478452	EPHA10	Q5JZY3	1008 aa		11.12	□□□□□ -0.63
MMS19-215	ENST00000478452	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.12	□□□□□ -0.63
MMS19-215	ENST00000478452	SLC4A10	Q6U841	1118 aa		11.12	□□□□□ -0.63
MMS19-215	ENST00000478452	CFHR5	Q9BXR6	569 aa		11.12	□□□□□ -0.63
MMS19-215	ENST00000478452	R3HDML	Q9H3Y0	253 aa		11.12	□□□□□ -0.63
MMS19-215	ENST00000478452	CASP8AP2	Q9UKL3	1982 aa		11.12	□□□□□ -0.63
MMS19-215	ENST00000478452	IRS2	Q9Y4H2	1338 aa		11.11	□□□□□ -0.63
MMS19-215	ENST00000478452	SPDYE2B	A6NHP3	402 aa		11.11	□□□□□ -0.63
MMS19-215	ENST00000478452	SPDYE6	P0CI01	402 aa		11.11	□□□□□ -0.63
MMS19-215	ENST00000478452	HIBADH	P31937	336 aa	Known RBP	11.11	□□□□□ -0.63
MMS19-215	ENST00000478452	OTUD7B	Q6GQQ9	843 aa		11.11	□□□□□ -0.63
MMS19-215	ENST00000478452	IFNL1	Q8IU54	200 aa		11.11	□□□□□ -0.63
MMS19-215	ENST00000478452	VEZT	Q9HBM0	779 aa		11.11	□□□□□ -0.63
MMS19-215	ENST00000478452	JAG2	Q9Y219	1238 aa		11.11	□□□□□ -0.63
MMS19-215	ENST00000478452	PCDHAC2	Q9Y5I4	1007 aa		11.11	□□□□□ -0.63
MMS19-215	ENST00000478452	SCN9A	Q15858	1988 aa		11.1	□□□□□ -0.63
MMS19-215	ENST00000478452	USP2	O75604	605 aa	Predicted RBP	11.1	□□□□□ -0.63
MMS19-215	ENST00000478452	ALDH1L1	O75891	902 aa		11.1	□□□□□ -0.63
MMS19-215	ENST00000478452	ZBTB48	P10074	688 aa	Predicted RBP	11.1	□□□□□ -0.63
MMS19-215	ENST00000478452	IREB2	P48200	963 aa	Known RBP	11.1	□□□□□ -0.63
MMS19-215	ENST00000478452	UBE4A	Q14139	1066 aa		11.1	□□□□□ -0.63
MMS19-215	ENST00000478452	RASA3	Q14644	834 aa		11.1	□□□□□ -0.63
MMS19-215	ENST00000478452	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.1	□□□□□ -0.63
MMS19-215	ENST00000478452	TDRD7	Q8NHU6	1098 aa	Known RBP	11.1	□□□□□ -0.63
MMS19-215	ENST00000478452	SRCIN1	Q9C0H9	1055 aa		11.1	□□□□□ -0.63
MMS19-215	ENST00000478452	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.1	□□□□□ -0.63
MMS19-215	ENST00000478452	POLR2A	P24928	1970 aa	Known RBP	11.09	□□□□□ -0.63
MMS19-215	ENST00000478452	TNFAIP1	Q13829	316 aa		11.09	□□□□□ -0.63
MMS19-215	ENST00000478452	ANKRD13A	Q8IZ07	590 aa		11.09	□□□□□ -0.63
MMS19-215	ENST00000478452	WNK4	Q96J92	1243 aa		11.09	□□□□□ -0.63
MMS19-215	ENST00000478452	CLMN	Q96JQ2	1002 aa		11.09	□□□□□ -0.63
MMS19-215	ENST00000478452	FAM84B	Q96KN1	310 aa	Predicted RBP	11.09	□□□□□ -0.63
MMS19-215	ENST00000478452	SERPINA10	Q9UK55	444 aa		11.09	□□□□□ -0.63
MMS19-215	ENST00000478452	TTF2	Q9UNY4	1162 aa	Known RBP	11.09	□□□□□ -0.63
MMS19-215	ENST00000478452	FAM205A	Q6ZU69	1335 aa		11.09	□□□□□ -0.63
MMS19-215	ENST00000478452	GYG1	P46976	350 aa		11.08	□□□□□ -0.64
MMS19-215	ENST00000478452	MFSD14B	Q5SR56	506 aa		11.08	□□□□□ -0.64
MMS19-215	ENST00000478452	VPS37D	Q86XT2	251 aa		11.08	□□□□□ -0.64
MMS19-215	ENST00000478452	FAM9B	Q8IZU0	186 aa		11.08	□□□□□ -0.64
MMS19-215	ENST00000478452	PUS3	Q9BZE2	481 aa	Known RBP	11.08	□□□□□ -0.64
MMS19-215	ENST00000478452	TDRD3	Q9H7E2	651 aa	Known RBP	11.08	□□□□□ -0.64
MMS19-215	ENST00000478452	ZNF70	Q9UC06	446 aa	Predicted RBP	11.08	□□□□□ -0.64
MMS19-215	ENST00000478452	RIPOR2	Q9Y4F9	1068 aa		11.08	□□□□□ -0.64
MMS19-215	ENST00000478452	TRIM17	Q9Y577	477 aa		11.08	□□□□□ -0.64
MMS19-215	ENST00000478452	PAPPA2	Q9BXP8	1791 aa		11.08	□□□□□ -0.64
MMS19-215	ENST00000478452	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.07	□□□□□ -0.64
MMS19-215	ENST00000478452	FRAT2	O75474	233 aa	Predicted RBP	11.07	□□□□□ -0.64
MMS19-215	ENST00000478452	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.07	□□□□□ -0.64
MMS19-215	ENST00000478452	CAVIN4	Q5BKX8	364 aa		11.07	□□□□□ -0.64
MMS19-215	ENST00000478452	INTS3	Q68E01	1043 aa	Known RBP	11.07	□□□□□ -0.64
MMS19-215	ENST00000478452	DZIP1L	Q8IYY4	767 aa	Known RBP	11.07	□□□□□ -0.64
MMS19-215	ENST00000478452	SUCLG2	Q96I99	432 aa		11.07	□□□□□ -0.64
MMS19-215	ENST00000478452	AOX1	Q06278	1338 aa		11.07	□□□□□ -0.64
MMS19-215	ENST00000478452	MROH5	Q6ZUA9	1318 aa		11.07	□□□□□ -0.64
MMS19-215	ENST00000478452	TESPA1	A2RU30	521 aa	Predicted RBP	11.06	□□□□□ -0.64
MMS19-215	ENST00000478452	TCP10L2	B9ZVM9	353 aa		11.06	□□□□□ -0.64
MMS19-215	ENST00000478452	CRK	P46108	304 aa		11.06	□□□□□ -0.64
MMS19-215	ENST00000478452	TNNI2	P48788	182 aa		11.06	□□□□□ -0.64
MMS19-215	ENST00000478452	MAP3K9	P80192	1104 aa		11.06	□□□□□ -0.64
MMS19-215	ENST00000478452	SPDYE2	Q495Y8	402 aa		11.06	□□□□□ -0.64
MMS19-215	ENST00000478452	PRPF38B	Q5VTL8	546 aa	Known RBP	11.06	□□□□□ -0.64
MMS19-215	ENST00000478452	OTOP1	Q7RTM1	612 aa		11.06	□□□□□ -0.64
MMS19-215	ENST00000478452	FBXO33	Q7Z6M2	555 aa		11.06	□□□□□ -0.64
MMS19-215	ENST00000478452	OPTN	Q96CV9	577 aa		11.06	□□□□□ -0.64
MMS19-215	ENST00000478452	ERO1A	Q96HE7	468 aa		11.06	□□□□□ -0.64
MMS19-215	ENST00000478452	KAZALD1	Q96I82	304 aa		11.06	□□□□□ -0.64
MMS19-215	ENST00000478452	PCDH10	Q9P2E7	1040 aa		11.06	□□□□□ -0.64
MMS19-215	ENST00000478452	COL1A1	P02452	1464 aa	Predicted RBP	11.06	□□□□□ -0.64
MMS19-215	ENST00000478452	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.05	□□□□□ -0.64
MMS19-215	ENST00000478452	GJA5	P36382	358 aa		11.05	□□□□□ -0.64
MMS19-215	ENST00000478452	SP3	Q02447	781 aa		11.05	□□□□□ -0.64
MMS19-215	ENST00000478452	METTL24	Q5JXM2	366 aa		11.05	□□□□□ -0.64
MMS19-215	ENST00000478452	PTPN18	Q99952	460 aa		11.05	□□□□□ -0.64
MMS19-215	ENST00000478452	ELP3	Q9H9T3	547 aa		11.05	□□□□□ -0.64
MMS19-215	ENST00000478452	PDE8B	O95263	885 aa		11.04	□□□□□ -0.64
MMS19-215	ENST00000478452	ZEB1	P37275	1124 aa	Predicted RBP	11.04	□□□□□ -0.64
MMS19-215	ENST00000478452	HDLBP	Q00341	1268 aa	Known RBP	11.04	□□□□□ -0.64
MMS19-215	ENST00000478452	CHAF1A	Q13111	956 aa	Predicted RBP	11.04	□□□□□ -0.64
MMS19-215	ENST00000478452	CRHR2	Q13324	411 aa		11.04	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms