RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 UTYO14607 1347 aa18.17■□□□□ 0.5
SMARCE1-209ENST00000478349 IRS2Q9Y4H2 1338 aa18.17■□□□□ 0.5
SMARCE1-209ENST00000478349 CCDC85CA6NKD9 419 aa18.16■□□□□ 0.5
SMARCE1-209ENST00000478349 TRPA1O75762 1119 aa18.16■□□□□ 0.5
SMARCE1-209ENST00000478349 SREBF2Q12772 1141 aa18.16■□□□□ 0.5
SMARCE1-209ENST00000478349 VPS37DQ86XT2 251 aa18.16■□□□□ 0.5
SMARCE1-209ENST00000478349 SUCLG2Q96I99 432 aa18.16■□□□□ 0.5
SMARCE1-209ENST00000478349 ZNF594Q96JF6 807 aaPredicted RBP18.16■□□□□ 0.5
SMARCE1-209ENST00000478349 MCOLN1Q9GZU1 580 aa18.16■□□□□ 0.5
SMARCE1-209ENST00000478349 UBE2Q2LH0YL09 131 aa18.15■□□□□ 0.5
SMARCE1-209ENST00000478349 HIBADHP31937 336 aaKnown RBP18.15■□□□□ 0.5
SMARCE1-209ENST00000478349 TNFAIP1Q13829 316 aa18.15■□□□□ 0.5
SMARCE1-209ENST00000478349 ALDH1L2Q3SY69 923 aa18.15■□□□□ 0.5
SMARCE1-209ENST00000478349 MRPL50Q8N5N7 158 aaKnown RBP18.15■□□□□ 0.5
SMARCE1-209ENST00000478349 ZBED3Q96IU2 234 aaPredicted RBP18.15■□□□□ 0.5
SMARCE1-209ENST00000478349 CSRNP1Q96S65 589 aa18.15■□□□□ 0.5
SMARCE1-209ENST00000478349 SPDYE2BA6NHP3 402 aa18.14■□□□□ 0.49
SMARCE1-209ENST00000478349 SNAP23O00161 211 aa18.14■□□□□ 0.49
SMARCE1-209ENST00000478349 PPP1R12BO60237 982 aaPredicted RBP18.14■□□□□ 0.49
SMARCE1-209ENST00000478349 CT47B1P0C2W7 299 aaPredicted RBP18.14■□□□□ 0.49
SMARCE1-209ENST00000478349 NBPF7P0C2Y1 421 aaPredicted RBP18.14■□□□□ 0.49
SMARCE1-209ENST00000478349 SPDYE6P0CI01 402 aa18.14■□□□□ 0.49
SMARCE1-209ENST00000478349 RBM5P52756 815 aaKnown RBP eCLIP18.14■□□□□ 0.49
SMARCE1-209ENST00000478349 RABL6Q3YEC7 729 aaPredicted RBP18.14■□□□□ 0.49
SMARCE1-209ENST00000478349 SUPT20HL1Q3ZLR7 823 aa18.14■□□□□ 0.49
SMARCE1-209ENST00000478349 CFAP100Q494V2 611 aa18.14■□□□□ 0.49
SMARCE1-209ENST00000478349 CAVIN4Q5BKX8 364 aa18.14■□□□□ 0.49
SMARCE1-209ENST00000478349 CERS5Q8N5B7 392 aa18.14■□□□□ 0.49
SMARCE1-209ENST00000478349 DEFB129Q9H1M3 183 aa18.14■□□□□ 0.49
SMARCE1-209ENST00000478349 BICC1Q9H694 974 aaKnown RBP18.14■□□□□ 0.49
SMARCE1-209ENST00000478349 HDAC5Q9UQL6 1122 aa18.14■□□□□ 0.49
SMARCE1-209ENST00000478349 FAM205AQ6ZU69 1335 aa18.14■□□□□ 0.49
SMARCE1-209ENST00000478349 UNCXA6NJT0 531 aa18.13■□□□□ 0.49
SMARCE1-209ENST00000478349 F8W031 263 aaPredicted RBP18.13■□□□□ 0.49
SMARCE1-209ENST00000478349 FRAT2O75474 233 aaPredicted RBP18.13■□□□□ 0.49
SMARCE1-209ENST00000478349 METTL24Q5JXM2 366 aa18.13■□□□□ 0.49
SMARCE1-209ENST00000478349 MFSD14BQ5SR56 506 aa18.13■□□□□ 0.49
SMARCE1-209ENST00000478349 PRAMEF18Q5VWM3 479 aa18.13■□□□□ 0.49
SMARCE1-209ENST00000478349 SMC4Q9NTJ3 1288 aa18.13■□□□□ 0.49
SMARCE1-209ENST00000478349 SCAF8Q9UPN6 1271 aaKnown RBP18.13■□□□□ 0.49
SMARCE1-209ENST00000478349 SLFN5Q08AF3 891 aa18.12■□□□□ 0.49
SMARCE1-209ENST00000478349 MOB2Q70IA6 237 aa18.12■□□□□ 0.49
SMARCE1-209ENST00000478349 TBC1D22AQ8WUA7 517 aa18.12■□□□□ 0.49
SMARCE1-209ENST00000478349 SSH1Q8WYL5 1049 aa18.12■□□□□ 0.49
SMARCE1-209ENST00000478349 VEZTQ9HBM0 779 aa18.12■□□□□ 0.49
SMARCE1-209ENST00000478349 SERPINA10Q9UK55 444 aa18.12■□□□□ 0.49
SMARCE1-209ENST00000478349 ANGEL1Q9UNK9 670 aaKnown RBP18.12■□□□□ 0.49
SMARCE1-209ENST00000478349 ALDH1A1P00352 501 aa18.11■□□□□ 0.49
SMARCE1-209ENST00000478349 TDRD7Q8NHU6 1098 aaKnown RBP18.11■□□□□ 0.49
SMARCE1-209ENST00000478349 GYG1P46976 350 aa18.1■□□□□ 0.49
SMARCE1-209ENST00000478349 IREB2P48200 963 aaKnown RBP18.1■□□□□ 0.49
SMARCE1-209ENST00000478349 PRKG1Q13976 671 aa18.1■□□□□ 0.49
SMARCE1-209ENST00000478349 CTU1Q7Z7A3 348 aaKnown RBP18.1■□□□□ 0.49
SMARCE1-209ENST00000478349 KAZALD1Q96I82 304 aa18.1■□□□□ 0.49
SMARCE1-209ENST00000478349 TTF2Q9UNY4 1162 aaKnown RBP18.1■□□□□ 0.49
SMARCE1-209ENST00000478349 RIPOR2Q9Y4F9 1068 aa18.1■□□□□ 0.49
SMARCE1-209ENST00000478349 ZNF646O15015 1829 aaPredicted RBP18.09■□□□□ 0.49
SMARCE1-209ENST00000478349 MAST3O60307 1309 aa18.09■□□□□ 0.49
SMARCE1-209ENST00000478349 KIF16BQ96L93 1317 aa18.09■□□□□ 0.49
SMARCE1-209ENST00000478349 IFIT1P09914 478 aaKnown RBP18.09■□□□□ 0.49
SMARCE1-209ENST00000478349 ZBTB48P10074 688 aaPredicted RBP18.09■□□□□ 0.49
SMARCE1-209ENST00000478349 TNNI2P48788 182 aa18.09■□□□□ 0.49
SMARCE1-209ENST00000478349 INHBEP58166 350 aa18.09■□□□□ 0.49
SMARCE1-209ENST00000478349 MAP3K11Q16584 847 aa18.09■□□□□ 0.49
SMARCE1-209ENST00000478349 LDLRAD1Q5T700 205 aa18.09■□□□□ 0.49
SMARCE1-209ENST00000478349 SLC10A4Q96EP9 437 aa18.09■□□□□ 0.49
SMARCE1-209ENST00000478349 FAM84BQ96KN1 310 aaPredicted RBP18.09■□□□□ 0.49
SMARCE1-209ENST00000478349 PUS3Q9BZE2 481 aaKnown RBP18.09■□□□□ 0.49
SMARCE1-209ENST00000478349 JAG2Q9Y219 1238 aa18.09■□□□□ 0.49
SMARCE1-209ENST00000478349 POLR2AP24928 1970 aaKnown RBP18.09■□□□□ 0.49
SMARCE1-209ENST00000478349 CLRN2A0PK11 232 aa18.08■□□□□ 0.48
SMARCE1-209ENST00000478349 MANSC4A6NHS7 340 aaPredicted RBP18.08■□□□□ 0.48
SMARCE1-209ENST00000478349 PDE8BO95263 885 aa18.08■□□□□ 0.48
SMARCE1-209ENST00000478349 TM4SF4P48230 202 aa18.08■□□□□ 0.48
SMARCE1-209ENST00000478349 MLLT1Q03111 559 aaPredicted RBP18.08■□□□□ 0.48
SMARCE1-209ENST00000478349 PTPN12Q05209 780 aaKnown RBP18.08■□□□□ 0.48
SMARCE1-209ENST00000478349 PUM3Q15397 648 aaKnown RBP18.08■□□□□ 0.48
SMARCE1-209ENST00000478349 PKN2Q16513 984 aaKnown RBP18.08■□□□□ 0.48
SMARCE1-209ENST00000478349 NOM1Q5C9Z4 860 aaKnown RBP18.08■□□□□ 0.48
SMARCE1-209ENST00000478349 ANKRD44Q8N8A2 993 aa18.08■□□□□ 0.48
SMARCE1-209ENST00000478349 CCER2I3L3R5 266 aa18.07■□□□□ 0.48
SMARCE1-209ENST00000478349 SPRYD7Q5W111 196 aa18.07■□□□□ 0.48
SMARCE1-209ENST00000478349 PRMT6Q96LA8 375 aaPredicted RBP18.07■□□□□ 0.48
SMARCE1-209ENST00000478349 API5Q9BZZ5 524 aaKnown RBP18.07■□□□□ 0.48
SMARCE1-209ENST00000478349 TMOD2Q9NZR1 351 aa18.07■□□□□ 0.48
SMARCE1-209ENST00000478349 A0A1B0GUL6 1792 aa18.07■□□□□ 0.48
SMARCE1-209ENST00000478349 UBTFL1P0CB47 393 aaPredicted RBP18.06■□□□□ 0.48
SMARCE1-209ENST00000478349 HDLBPQ00341 1268 aaKnown RBP18.06■□□□□ 0.48
SMARCE1-209ENST00000478349 RASA3Q14644 834 aa18.06■□□□□ 0.48
SMARCE1-209ENST00000478349 SPDYE2Q495Y8 402 aa18.06■□□□□ 0.48
SMARCE1-209ENST00000478349 OTUD7BQ6GQQ9 843 aa18.06■□□□□ 0.48
SMARCE1-209ENST00000478349 USP44Q9H0E7 712 aa18.06■□□□□ 0.48
SMARCE1-209ENST00000478349 FBXO3Q9UK99 471 aa18.06■□□□□ 0.48
SMARCE1-209ENST00000478349 SUGT1Q9Y2Z0 365 aa18.06■□□□□ 0.48
SMARCE1-209ENST00000478349 SLC5A1P13866 664 aa18.05■□□□□ 0.48
SMARCE1-209ENST00000478349 MKRN3Q13064 507 aaKnown RBP18.05■□□□□ 0.48
SMARCE1-209ENST00000478349 CHAF1AQ13111 956 aaPredicted RBP18.05■□□□□ 0.48
SMARCE1-209ENST00000478349 LRRC24Q50LG9 513 aa18.05■□□□□ 0.48
SMARCE1-209ENST00000478349 FBXO33Q7Z6M2 555 aa18.05■□□□□ 0.48
SMARCE1-209ENST00000478349 ANKRD13AQ8IZ07 590 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms