RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 RIPOR2Q9Y4F9 1068 aa17.67■□□□□ 0.42
PDE6D-204ENST00000477748 LRRFIP2Q9Y608 721 aaKnown RBP17.67■□□□□ 0.42
PDE6D-204ENST00000477748 MROH5Q6ZUA9 1318 aa17.67■□□□□ 0.42
PDE6D-204ENST00000477748 GNAI3P08754 354 aa17.66■□□□□ 0.42
PDE6D-204ENST00000477748 LRRC24Q50LG9 513 aa17.66■□□□□ 0.42
PDE6D-204ENST00000477748 CD209Q9NNX6 404 aa17.66■□□□□ 0.42
PDE6D-204ENST00000477748 ASTN2O75129 1339 aaPredicted RBP17.66■□□□□ 0.42
PDE6D-204ENST00000477748 IRS2Q9Y4H2 1338 aa17.66■□□□□ 0.42
PDE6D-204ENST00000477748 MLLT1Q03111 559 aaPredicted RBP17.65■□□□□ 0.42
PDE6D-204ENST00000477748 UBE4AQ14139 1066 aa17.65■□□□□ 0.42
PDE6D-204ENST00000477748 METTL24Q5JXM2 366 aa17.65■□□□□ 0.42
PDE6D-204ENST00000477748 RGMBQ6NW40 437 aa17.65■□□□□ 0.42
PDE6D-204ENST00000477748 DLK2Q6UY11 383 aa17.65■□□□□ 0.42
PDE6D-204ENST00000477748 ZNF804AQ7Z570 1209 aa17.65■□□□□ 0.42
PDE6D-204ENST00000477748 CDCA5Q96FF9 252 aa17.65■□□□□ 0.42
PDE6D-204ENST00000477748 ZNF646O15015 1829 aaPredicted RBP17.64■□□□□ 0.41
PDE6D-204ENST00000477748 RFX5P48382 616 aaPredicted RBP17.64■□□□□ 0.41
PDE6D-204ENST00000477748 FKBP1BP68106 108 aa17.64■□□□□ 0.41
PDE6D-204ENST00000477748 TTLL5Q6EMB2 1281 aa17.64■□□□□ 0.41
PDE6D-204ENST00000477748 CCDC102AQ96A19 550 aa17.64■□□□□ 0.41
PDE6D-204ENST00000477748 GTF2IP78347 998 aa17.63■□□□□ 0.41
PDE6D-204ENST00000477748 TMEM57Q8N5G2 664 aa17.63■□□□□ 0.41
PDE6D-204ENST00000477748 MXD3Q9BW11 206 aa17.63■□□□□ 0.41
PDE6D-204ENST00000477748 HDAC9Q9UKV0 1011 aa17.63■□□□□ 0.41
PDE6D-204ENST00000477748 POLR2AP24928 1970 aaKnown RBP17.62■□□□□ 0.41
PDE6D-204ENST00000477748 EYA2O00167 538 aa17.62■□□□□ 0.41
PDE6D-204ENST00000477748 RGS19P49795 217 aa17.62■□□□□ 0.41
PDE6D-204ENST00000477748 PTPN12Q05209 780 aaKnown RBP17.62■□□□□ 0.41
PDE6D-204ENST00000477748 FTSJ3Q8IY81 847 aaKnown RBP17.62■□□□□ 0.41
PDE6D-204ENST00000477748 CCDC85CA6NKD9 419 aa17.61■□□□□ 0.41
PDE6D-204ENST00000477748 FAM155AB1AL88 458 aaPredicted RBP17.61■□□□□ 0.41
PDE6D-204ENST00000477748 PDE8BO95263 885 aa17.61■□□□□ 0.41
PDE6D-204ENST00000477748 IL1R1P14778 569 aa17.61■□□□□ 0.41
PDE6D-204ENST00000477748 ZNF157P51786 506 aaPredicted RBP17.61■□□□□ 0.41
PDE6D-204ENST00000477748 NBPF9Q3BBW0 867 aa17.61■□□□□ 0.41
PDE6D-204ENST00000477748 DZIP1LQ8IYY4 767 aaKnown RBP17.61■□□□□ 0.41
PDE6D-204ENST00000477748 PAPPA2Q9BXP8 1791 aa17.61■□□□□ 0.41
PDE6D-204ENST00000477748 WNT10BO00744 389 aa17.6■□□□□ 0.41
PDE6D-204ENST00000477748 SLC10A3P09131 477 aa17.6■□□□□ 0.41
PDE6D-204ENST00000477748 HIBADHP31937 336 aaKnown RBP17.6■□□□□ 0.41
PDE6D-204ENST00000477748 GYG1P46976 350 aa17.6■□□□□ 0.41
PDE6D-204ENST00000477748 KIAA0825Q8IV33 1275 aa17.6■□□□□ 0.41
PDE6D-204ENST00000477748 VGLL2Q8N8G2 317 aa17.6■□□□□ 0.41
PDE6D-204ENST00000477748 SIL1Q9H173 461 aa17.6■□□□□ 0.41
PDE6D-204ENST00000477748 GNAI2P04899 355 aa17.59■□□□□ 0.41
PDE6D-204ENST00000477748 APOBEC3FQ8IUX4 373 aaKnown RBP17.59■□□□□ 0.41
PDE6D-204ENST00000477748 FAM84BQ96KN1 310 aaPredicted RBP17.59■□□□□ 0.41
PDE6D-204ENST00000477748 FBXO3Q9UK99 471 aa17.59■□□□□ 0.41
PDE6D-204ENST00000477748 SRGAP3O43295 1099 aa17.58■□□□□ 0.4
PDE6D-204ENST00000477748 CIAO1O76071 339 aa17.58■□□□□ 0.4
PDE6D-204ENST00000477748 SASH1O94885 1247 aa17.58■□□□□ 0.4
PDE6D-204ENST00000477748 IFIT1P09914 478 aaKnown RBP17.58■□□□□ 0.4
PDE6D-204ENST00000477748 NF2P35240 595 aa17.58■□□□□ 0.4
PDE6D-204ENST00000477748 FKBP1AP62942 108 aaKnown RBP17.58■□□□□ 0.4
PDE6D-204ENST00000477748 PUM3Q15397 648 aaKnown RBP17.58■□□□□ 0.4
PDE6D-204ENST00000477748 CAVIN4Q5BKX8 364 aa17.58■□□□□ 0.4
PDE6D-204ENST00000477748 ATG9AQ7Z3C6 839 aa17.58■□□□□ 0.4
PDE6D-204ENST00000477748 VPS37DQ86XT2 251 aa17.58■□□□□ 0.4
PDE6D-204ENST00000477748 ITPRIPQ8IWB1 547 aa17.58■□□□□ 0.4
PDE6D-204ENST00000477748 REM2Q8IYK8 340 aaPredicted RBP17.58■□□□□ 0.4
PDE6D-204ENST00000477748 SAGE1Q9NXZ1 904 aa17.58■□□□□ 0.4
PDE6D-204ENST00000477748 PA2G4Q9UQ80 394 aaKnown RBP17.58■□□□□ 0.4
PDE6D-204ENST00000477748 JAG2Q9Y219 1238 aa17.58■□□□□ 0.4
PDE6D-204ENST00000477748 COL1A1P02452 1464 aaPredicted RBP17.57■□□□□ 0.4
PDE6D-204ENST00000477748 RLBP1P12271 317 aa17.57■□□□□ 0.4
PDE6D-204ENST00000477748 MTX1Q13505 466 aa17.57■□□□□ 0.4
PDE6D-204ENST00000477748 MTMR14Q8NCE2 650 aa17.57■□□□□ 0.4
PDE6D-204ENST00000477748 TDRD7Q8NHU6 1098 aaKnown RBP17.57■□□□□ 0.4
PDE6D-204ENST00000477748 ZBED3Q96IU2 234 aaPredicted RBP17.57■□□□□ 0.4
PDE6D-204ENST00000477748 ZIC5Q96T25 663 aa17.57■□□□□ 0.4
PDE6D-204ENST00000477748 COPRSQ9NQ92 184 aa17.57■□□□□ 0.4
PDE6D-204ENST00000477748 CEP126Q9P2H0 1117 aa17.57■□□□□ 0.4
PDE6D-204ENST00000477748 TSKSQ9UJT2 592 aa17.57■□□□□ 0.4
PDE6D-204ENST00000477748 SLC5A1P13866 664 aa17.56■□□□□ 0.4
PDE6D-204ENST00000477748 IL15P40933 162 aaPredicted RBP17.56■□□□□ 0.4
PDE6D-204ENST00000477748 FBXO33Q7Z6M2 555 aa17.56■□□□□ 0.4
PDE6D-204ENST00000477748 RASAL3Q86YV0 1011 aa17.56■□□□□ 0.4
PDE6D-204ENST00000477748 CERS5Q8N5B7 392 aa17.56■□□□□ 0.4
PDE6D-204ENST00000477748 FAM205AQ6ZU69 1335 aa17.55■□□□□ 0.4
PDE6D-204ENST00000477748 FRAT2O75474 233 aaPredicted RBP17.55■□□□□ 0.4
PDE6D-204ENST00000477748 FGFR2P21802 821 aa17.55■□□□□ 0.4
PDE6D-204ENST00000477748 KIF23Q02241 960 aaPredicted RBP17.55■□□□□ 0.4
PDE6D-204ENST00000477748 DLGAP5Q15398 846 aa17.55■□□□□ 0.4
PDE6D-204ENST00000477748 LPIN2Q92539 896 aa17.55■□□□□ 0.4
PDE6D-204ENST00000477748 RCAN3Q9UKA8 241 aa17.55■□□□□ 0.4
PDE6D-204ENST00000477748 IQSEC3Q9UPP2 1182 aaPredicted RBP17.55■□□□□ 0.4
PDE6D-204ENST00000477748 F8W031 263 aaPredicted RBP17.54■□□□□ 0.4
PDE6D-204ENST00000477748 MS4A1P11836 297 aa17.54■□□□□ 0.4
PDE6D-204ENST00000477748 BCAMP50895 628 aa17.54■□□□□ 0.4
PDE6D-204ENST00000477748 PANK1Q8TE04 598 aa17.54■□□□□ 0.4
PDE6D-204ENST00000477748 SCAF8Q9UPN6 1271 aaKnown RBP17.54■□□□□ 0.4
PDE6D-204ENST00000477748 MYO1BO43795 1136 aa17.53■□□□□ 0.4
PDE6D-204ENST00000477748 CHAF1AQ13111 956 aaPredicted RBP17.53■□□□□ 0.4
PDE6D-204ENST00000477748 TTLL12Q14166 644 aaPredicted RBP17.53■□□□□ 0.4
PDE6D-204ENST00000477748 ATP2B3Q16720 1220 aa17.53■□□□□ 0.4
PDE6D-204ENST00000477748 MFSD14BQ5SR56 506 aa17.53■□□□□ 0.4
PDE6D-204ENST00000477748 PPP2R3BQ9Y5P8 575 aa17.53■□□□□ 0.4
PDE6D-204ENST00000477748 PNMA6EA0A0J9YXQ4 647 aa17.52■□□□□ 0.4
PDE6D-204ENST00000477748 SPDYE2BA6NHP3 402 aa17.52■□□□□ 0.4
PDE6D-204ENST00000477748 ZBTB7BO15156 539 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms