RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 CLMNQ96JQ2 1002 aa8.54□□□□□ -1.04
RTFDC1-206ENST00000477485 DEFB129Q9H1M3 183 aa8.54□□□□□ -1.04
RTFDC1-206ENST00000477485 ANKRD18BA2A2Z9 1011 aa8.53□□□□□ -1.04
RTFDC1-206ENST00000477485 TAF5LO75529 589 aa8.53□□□□□ -1.04
RTFDC1-206ENST00000477485 CHRNDQ07001 517 aa8.53□□□□□ -1.04
RTFDC1-206ENST00000477485 FKBP5Q13451 457 aaPredicted RBP8.53□□□□□ -1.04
RTFDC1-206ENST00000477485 TWISTNBQ3B726 338 aaPredicted RBP8.53□□□□□ -1.04
RTFDC1-206ENST00000477485 OTUD7BQ6GQQ9 843 aa8.53□□□□□ -1.04
RTFDC1-206ENST00000477485 G2E3Q7L622 706 aa8.53□□□□□ -1.04
RTFDC1-206ENST00000477485 ZNF804AQ7Z570 1209 aa8.53□□□□□ -1.04
RTFDC1-206ENST00000477485 IFNL1Q8IU54 200 aa8.53□□□□□ -1.04
RTFDC1-206ENST00000477485 CD99L2Q8TCZ2 262 aa8.53□□□□□ -1.04
RTFDC1-206ENST00000477485 GCC1Q96CN9 775 aa8.53□□□□□ -1.04
RTFDC1-206ENST00000477485 WNK4Q96J92 1243 aa8.53□□□□□ -1.04
RTFDC1-206ENST00000477485 MYH16Q9H6N6 1097 aa8.53□□□□□ -1.04
RTFDC1-206ENST00000477485 PCDHAC2Q9Y5I4 1007 aa8.53□□□□□ -1.04
RTFDC1-206ENST00000477485 SSC5DA1L4H1 1573 aa8.52□□□□□ -1.04
RTFDC1-206ENST00000477485 ZSWIM8A7E2V4 1837 aa8.52□□□□□ -1.04
RTFDC1-206ENST00000477485 POTEFA5A3E0 1075 aa8.52□□□□□ -1.05
RTFDC1-206ENST00000477485 SNAP23O00161 211 aa8.52□□□□□ -1.05
RTFDC1-206ENST00000477485 ZBTB48P10074 688 aaPredicted RBP8.52□□□□□ -1.05
RTFDC1-206ENST00000477485 IREB2P48200 963 aaKnown RBP8.52□□□□□ -1.05
RTFDC1-206ENST00000477485 MMP14P50281 582 aa8.52□□□□□ -1.05
RTFDC1-206ENST00000477485 CFAP100Q494V2 611 aa8.52□□□□□ -1.05
RTFDC1-206ENST00000477485 NOM1Q5C9Z4 860 aaKnown RBP8.52□□□□□ -1.05
RTFDC1-206ENST00000477485 TAF7LQ5H9L4 462 aa8.52□□□□□ -1.05
RTFDC1-206ENST00000477485 OTOP1Q7RTM1 612 aa8.52□□□□□ -1.05
RTFDC1-206ENST00000477485 ERO1AQ96HE7 468 aa8.52□□□□□ -1.05
RTFDC1-206ENST00000477485 CD209Q9NNX6 404 aa8.52□□□□□ -1.05
RTFDC1-206ENST00000477485 H7C1W4 665 aa8.51□□□□□ -1.05
RTFDC1-206ENST00000477485 IGF2BP3O00425 579 aaKnown RBP eCLIP8.51□□□□□ -1.05
RTFDC1-206ENST00000477485 MYCP01106 439 aaPredicted RBP8.51□□□□□ -1.05
RTFDC1-206ENST00000477485 INHBEP58166 350 aa8.51□□□□□ -1.05
RTFDC1-206ENST00000477485 CRHR2Q13324 411 aa8.51□□□□□ -1.05
RTFDC1-206ENST00000477485 IFIT5Q13325 482 aaKnown RBP8.51□□□□□ -1.05
RTFDC1-206ENST00000477485 GCKRQ14397 625 aa8.51□□□□□ -1.05
RTFDC1-206ENST00000477485 SUPT20HL1Q3ZLR7 823 aa8.51□□□□□ -1.05
RTFDC1-206ENST00000477485 LDLRAD1Q5T700 205 aa8.51□□□□□ -1.05
RTFDC1-206ENST00000477485 NBPF12Q5TAG4 269 aaPredicted RBP8.51□□□□□ -1.05
RTFDC1-206ENST00000477485 INTS3Q68E01 1043 aaKnown RBP8.51□□□□□ -1.05
RTFDC1-206ENST00000477485 CERS5Q8N5B7 392 aa8.51□□□□□ -1.05
RTFDC1-206ENST00000477485 CFHR5Q9BXR6 569 aa8.51□□□□□ -1.05
RTFDC1-206ENST00000477485 PRKRIP1Q9H875 184 aaPredicted RBP8.51□□□□□ -1.05
RTFDC1-206ENST00000477485 ELP3Q9H9T3 547 aa8.51□□□□□ -1.05
RTFDC1-206ENST00000477485 EFCC1Q9HA90 598 aa8.51□□□□□ -1.05
RTFDC1-206ENST00000477485 PPP2R3BQ9Y5P8 575 aa8.51□□□□□ -1.05
RTFDC1-206ENST00000477485 KIAA0100Q14667 2235 aaKnown RBP8.5□□□□□ -1.05
RTFDC1-206ENST00000477485 ECM2O94769 699 aaPredicted RBP8.5□□□□□ -1.05
RTFDC1-206ENST00000477485 FLIIQ13045 1269 aa8.5□□□□□ -1.05
RTFDC1-206ENST00000477485 ANKRD13AQ8IZ07 590 aa8.5□□□□□ -1.05
RTFDC1-206ENST00000477485 DNAAF4Q8WXU2 420 aa8.5□□□□□ -1.05
RTFDC1-206ENST00000477485 ZBED3Q96IU2 234 aaPredicted RBP8.5□□□□□ -1.05
RTFDC1-206ENST00000477485 TMEM106CQ9BVX2 250 aa8.5□□□□□ -1.05
RTFDC1-206ENST00000477485 CNNM1Q9NRU3 951 aa8.5□□□□□ -1.05
RTFDC1-206ENST00000477485 PTPN22Q9Y2R2 807 aa8.5□□□□□ -1.05
RTFDC1-206ENST00000477485 SALL2Q9Y467 1007 aaPredicted RBP8.5□□□□□ -1.05
RTFDC1-206ENST00000477485 SPDYE2BA6NHP3 402 aa8.49□□□□□ -1.05
RTFDC1-206ENST00000477485 SPDYE6P0CI01 402 aa8.49□□□□□ -1.05
RTFDC1-206ENST00000477485 EN2P19622 333 aaPredicted RBP8.49□□□□□ -1.05
RTFDC1-206ENST00000477485 SP3Q02447 781 aa8.49□□□□□ -1.05
RTFDC1-206ENST00000477485 TNFAIP1Q13829 316 aa8.49□□□□□ -1.05
RTFDC1-206ENST00000477485 RASA3Q14644 834 aa8.49□□□□□ -1.05
RTFDC1-206ENST00000477485 TAF1CQ15572 869 aaPredicted RBP8.49□□□□□ -1.05
RTFDC1-206ENST00000477485 SLC4A8Q2Y0W8 1093 aa8.49□□□□□ -1.05
RTFDC1-206ENST00000477485 HABP4Q5JVS0 413 aaKnown RBP8.49□□□□□ -1.05
RTFDC1-206ENST00000477485 OPTNQ96CV9 577 aa8.49□□□□□ -1.05
RTFDC1-206ENST00000477485 ZNF594Q96JF6 807 aaPredicted RBP8.49□□□□□ -1.05
RTFDC1-206ENST00000477485 PRMT6Q96LA8 375 aaPredicted RBP8.49□□□□□ -1.05
RTFDC1-206ENST00000477485 PLA2G12BQ9BX93 195 aa8.49□□□□□ -1.05
RTFDC1-206ENST00000477485 AOX1Q06278 1338 aa8.49□□□□□ -1.05
RTFDC1-206ENST00000477485 TCP10L2B9ZVM9 353 aa8.48□□□□□ -1.05
RTFDC1-206ENST00000477485 F6X3S4 739 aa8.48□□□□□ -1.05
RTFDC1-206ENST00000477485 USP2O75604 605 aaPredicted RBP8.48□□□□□ -1.05
RTFDC1-206ENST00000477485 WDHD1O75717 1129 aaPredicted RBP8.48□□□□□ -1.05
RTFDC1-206ENST00000477485 CSF1RP07333 972 aa8.48□□□□□ -1.05
RTFDC1-206ENST00000477485 GJA5P36382 358 aa8.48□□□□□ -1.05
RTFDC1-206ENST00000477485 MAP3K11Q16584 847 aa8.48□□□□□ -1.05
RTFDC1-206ENST00000477485 CCDC57Q2TAC2 916 aa8.48□□□□□ -1.05
RTFDC1-206ENST00000477485 SLC9C1Q4G0N8 1177 aa8.48□□□□□ -1.05
RTFDC1-206ENST00000477485 MFSD14BQ5SR56 506 aa8.48□□□□□ -1.05
RTFDC1-206ENST00000477485 LDHAL6AQ6ZMR3 332 aa8.48□□□□□ -1.05
RTFDC1-206ENST00000477485 MTMR14Q8NCE2 650 aa8.48□□□□□ -1.05
RTFDC1-206ENST00000477485 LINS1Q8NG48 757 aa8.48□□□□□ -1.05
RTFDC1-206ENST00000477485 OTUD5Q96G74 571 aa8.48□□□□□ -1.05
RTFDC1-206ENST00000477485 TDRD3Q9H7E2 651 aaKnown RBP8.48□□□□□ -1.05
RTFDC1-206ENST00000477485 TTF2Q9UNY4 1162 aaKnown RBP8.48□□□□□ -1.05
RTFDC1-206ENST00000477485 CSADQ9Y600 493 aa8.48□□□□□ -1.05
RTFDC1-206ENST00000477485 CCL15-CCL14A0A0B4J2E2 113 aa8.47□□□□□ -1.05
RTFDC1-206ENST00000477485 FRAT2O75474 233 aaPredicted RBP8.47□□□□□ -1.05
RTFDC1-206ENST00000477485 IL1R1P14778 569 aa8.47□□□□□ -1.05
RTFDC1-206ENST00000477485 GYG1P46976 350 aa8.47□□□□□ -1.05
RTFDC1-206ENST00000477485 TNNI2P48788 182 aa8.47□□□□□ -1.05
RTFDC1-206ENST00000477485 CASP7P55210 303 aa8.47□□□□□ -1.05
RTFDC1-206ENST00000477485 ARHGEF6Q15052 776 aa8.47□□□□□ -1.05
RTFDC1-206ENST00000477485 CCL15Q16663 113 aa8.47□□□□□ -1.05
RTFDC1-206ENST00000477485 LMBR1LQ6UX01 489 aa8.47□□□□□ -1.05
RTFDC1-206ENST00000477485 NBPF11Q86T75 865 aa8.47□□□□□ -1.05
RTFDC1-206ENST00000477485 VPS37DQ86XT2 251 aa8.47□□□□□ -1.05
RTFDC1-206ENST00000477485 PTPN18Q99952 460 aa8.47□□□□□ -1.05
RTFDC1-206ENST00000477485 ZFYVE28Q9HCC9 887 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms