RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 GPATCH3Q96I76 525 aa11.33□□□□□ -0.6
PGK1-204ENST00000477335 PSMD1Q99460 953 aa11.33□□□□□ -0.6
PGK1-204ENST00000477335 DNAJC2Q99543 621 aaKnown RBP11.33□□□□□ -0.6
PGK1-204ENST00000477335 CD209Q9NNX6 404 aa11.33□□□□□ -0.6
PGK1-204ENST00000477335 PIH1D3Q9NQM4 214 aaKnown RBP11.33□□□□□ -0.6
PGK1-204ENST00000477335 JAG2Q9Y219 1238 aa11.33□□□□□ -0.6
PGK1-204ENST00000477335 GOLGB1Q14789 3259 aaKnown RBP11.33□□□□□ -0.6
PGK1-204ENST00000477335 GOLIM4O00461 696 aa11.32□□□□□ -0.6
PGK1-204ENST00000477335 ERC2O15083 957 aa11.32□□□□□ -0.6
PGK1-204ENST00000477335 CYP2E1P05181 493 aaPredicted RBP11.32□□□□□ -0.6
PGK1-204ENST00000477335 UQCRFS1P1P0C7P4 283 aa11.32□□□□□ -0.6
PGK1-204ENST00000477335 SLFNL1Q499Z3 407 aa11.32□□□□□ -0.6
PGK1-204ENST00000477335 TBC1D9Q6ZT07 1266 aa11.32□□□□□ -0.6
PGK1-204ENST00000477335 RTKN2Q8IZC4 609 aa11.32□□□□□ -0.6
PGK1-204ENST00000477335 SPATA5Q8NB90 893 aa11.32□□□□□ -0.6
PGK1-204ENST00000477335 KCNQ5Q9NR82 932 aa11.32□□□□□ -0.6
PGK1-204ENST00000477335 ZNF646O15015 1829 aaPredicted RBP11.32□□□□□ -0.6
PGK1-204ENST00000477335 CHD4Q14839 1912 aa11.31□□□□□ -0.6
PGK1-204ENST00000477335 YDJCA8MPS7 323 aa11.31□□□□□ -0.6
PGK1-204ENST00000477335 IL1R1P14778 569 aa11.31□□□□□ -0.6
PGK1-204ENST00000477335 KIAA2012Q0VF49 1180 aa11.31□□□□□ -0.6
PGK1-204ENST00000477335 GRIK5Q16478 980 aa11.31□□□□□ -0.6
PGK1-204ENST00000477335 WASHC4Q2M389 1173 aa11.31□□□□□ -0.6
PGK1-204ENST00000477335 C8orf34Q49A92 452 aa11.31□□□□□ -0.6
PGK1-204ENST00000477335 CAVIN4Q5BKX8 364 aa11.31□□□□□ -0.6
PGK1-204ENST00000477335 TMX4Q9H1E5 349 aaPredicted RBP11.31□□□□□ -0.6
PGK1-204ENST00000477335 DBNDD1Q9H9R9 158 aa11.31□□□□□ -0.6
PGK1-204ENST00000477335 SCN9AQ15858 1988 aa11.3□□□□□ -0.6
PGK1-204ENST00000477335 TRIM6-TRIM34B2RNG4 842 aa11.3□□□□□ -0.6
PGK1-204ENST00000477335 PITPNM1O00562 1244 aa11.3□□□□□ -0.6
PGK1-204ENST00000477335 PPIP5K2O43314 1243 aa11.3□□□□□ -0.6
PGK1-204ENST00000477335 CHAF1AQ13111 956 aaPredicted RBP11.3□□□□□ -0.6
PGK1-204ENST00000477335 SOGA3Q5TF21 947 aa11.3□□□□□ -0.6
PGK1-204ENST00000477335 ZNF804AQ7Z570 1209 aa11.3□□□□□ -0.6
PGK1-204ENST00000477335 VPS37DQ86XT2 251 aa11.3□□□□□ -0.6
PGK1-204ENST00000477335 ZNF384Q8TF68 577 aa11.3□□□□□ -0.6
PGK1-204ENST00000477335 RILPL2Q969X0 211 aa11.3□□□□□ -0.6
PGK1-204ENST00000477335 EYA3Q99504 573 aa11.3□□□□□ -0.6
PGK1-204ENST00000477335 MXD3Q9BW11 206 aa11.3□□□□□ -0.6
PGK1-204ENST00000477335 ZC3H12CQ9C0D7 883 aaKnown RBP11.3□□□□□ -0.6
PGK1-204ENST00000477335 COA1Q9GZY4 146 aa11.3□□□□□ -0.6
PGK1-204ENST00000477335 IL25Q9H293 177 aa11.3□□□□□ -0.6
PGK1-204ENST00000477335 TAOK3Q9H2K8 898 aa11.3□□□□□ -0.6
PGK1-204ENST00000477335 PAG1Q9NWQ8 432 aa11.3□□□□□ -0.6
PGK1-204ENST00000477335 LTBP3Q9NS15 1303 aa11.3□□□□□ -0.6
PGK1-204ENST00000477335 SEMA3EO15041 775 aa11.29□□□□□ -0.6
PGK1-204ENST00000477335 ECE2O60344 883 aa11.29□□□□□ -0.6
PGK1-204ENST00000477335 IARSP41252 1262 aaKnown RBP11.29□□□□□ -0.6
PGK1-204ENST00000477335 GRIPAP1Q4V328 841 aa11.29□□□□□ -0.6
PGK1-204ENST00000477335 EVI5LQ96CN4 794 aa11.29□□□□□ -0.6
PGK1-204ENST00000477335 MYO5AQ9Y4I1 1855 aaKnown RBP11.29□□□□□ -0.6
PGK1-204ENST00000477335 PDS5AQ29RF7 1337 aaKnown RBP11.29□□□□□ -0.6
PGK1-204ENST00000477335 DOCK2Q92608 1830 aa11.28□□□□□ -0.6
PGK1-204ENST00000477335 CHMLP26374 656 aa11.28□□□□□ -0.6
PGK1-204ENST00000477335 PELP1Q8IZL8 1130 aaKnown RBP11.28□□□□□ -0.6
PGK1-204ENST00000477335 CNTROBQ8N137 903 aa11.28□□□□□ -0.6
PGK1-204ENST00000477335 CERS5Q8N5B7 392 aa11.28□□□□□ -0.6
PGK1-204ENST00000477335 KBTBD3Q8NAB2 608 aa11.28□□□□□ -0.6
PGK1-204ENST00000477335 SUPT20HQ8NEM7 779 aa11.28□□□□□ -0.6
PGK1-204ENST00000477335 GNL3LQ9NVN8 582 aaKnown RBP11.28□□□□□ -0.6
PGK1-204ENST00000477335 DENND2AQ9ULE3 1009 aa11.28□□□□□ -0.6
PGK1-204ENST00000477335 FAM205AQ6ZU69 1335 aa11.28□□□□□ -0.6
PGK1-204ENST00000477335 TCRBV5S4A2TA0A5A2 114 aa11.27□□□□□ -0.61
PGK1-204ENST00000477335 SEC24BO95487 1268 aa11.27□□□□□ -0.61
PGK1-204ENST00000477335 PRDX5P30044 214 aa11.27□□□□□ -0.61
PGK1-204ENST00000477335 GTF2IP78347 998 aa11.27□□□□□ -0.61
PGK1-204ENST00000477335 ARHGAP27Q6ZUM4 889 aa11.27□□□□□ -0.61
PGK1-204ENST00000477335 LARGE2Q8N3Y3 721 aa11.27□□□□□ -0.61
PGK1-204ENST00000477335 FAM227BQ96M60 508 aa11.27□□□□□ -0.61
PGK1-204ENST00000477335 FSD1Q9BTV5 496 aa11.27□□□□□ -0.61
PGK1-204ENST00000477335 MYH13Q9UKX3 1938 aa11.27□□□□□ -0.61
PGK1-204ENST00000477335 A0A0D9SFI3 127 aa11.26□□□□□ -0.61
PGK1-204ENST00000477335 CDC45O75419 566 aa11.26□□□□□ -0.61
PGK1-204ENST00000477335 FRAT2O75474 233 aaPredicted RBP11.26□□□□□ -0.61
PGK1-204ENST00000477335 NMIQ13287 307 aaPredicted RBP11.26□□□□□ -0.61
PGK1-204ENST00000477335 DACT2Q5SW24 774 aa11.26□□□□□ -0.61
PGK1-204ENST00000477335 SEC62Q99442 399 aaKnown RBP11.26□□□□□ -0.61
PGK1-204ENST00000477335 SALL1Q9NSC2 1324 aa11.26□□□□□ -0.61
PGK1-204ENST00000477335 RFX7Q2KHR2 1363 aa11.26□□□□□ -0.61
PGK1-204ENST00000477335 AK9Q5TCS8 1911 aa11.25□□□□□ -0.61
PGK1-204ENST00000477335 IDH1O75874 414 aaKnown RBP11.25□□□□□ -0.61
PGK1-204ENST00000477335 RAD17O75943 681 aa11.25□□□□□ -0.61
PGK1-204ENST00000477335 PDE6AP16499 860 aa11.25□□□□□ -0.61
PGK1-204ENST00000477335 ADD2P35612 726 aa11.25□□□□□ -0.61
PGK1-204ENST00000477335 PODNQ7Z5L7 613 aa11.25□□□□□ -0.61
PGK1-204ENST00000477335 ADGRA1Q86SQ6 560 aa11.25□□□□□ -0.61
PGK1-204ENST00000477335 OSBP2Q969R2 916 aa11.25□□□□□ -0.61
PGK1-204ENST00000477335 VPS33BQ9H267 617 aa11.25□□□□□ -0.61
PGK1-204ENST00000477335 ABCF2Q9UG63 623 aa11.25□□□□□ -0.61
PGK1-204ENST00000477335 CLEC11AQ9Y240 323 aa11.25□□□□□ -0.61
PGK1-204ENST00000477335 ADAMTSL1Q8N6G6 1762 aa11.24□□□□□ -0.61
PGK1-204ENST00000477335 PSME4Q14997 1843 aa11.24□□□□□ -0.61
PGK1-204ENST00000477335 G3V3G9 751 aa11.24□□□□□ -0.61
PGK1-204ENST00000477335 M0R2C6 588 aa11.24□□□□□ -0.61
PGK1-204ENST00000477335 PSMD14O00487 310 aa11.24□□□□□ -0.61
PGK1-204ENST00000477335 RNF113AO15541 343 aaKnown RBP11.24□□□□□ -0.61
PGK1-204ENST00000477335 MECOMQ03112 1051 aa11.24□□□□□ -0.61
PGK1-204ENST00000477335 TTF1Q15361 905 aaPredicted RBP11.24□□□□□ -0.61
PGK1-204ENST00000477335 MFSD14BQ5SR56 506 aa11.24□□□□□ -0.61
PGK1-204ENST00000477335 ZMYM1Q5SVZ6 1142 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms