RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 RGMBQ6NW40 437 aa21.56■■□□□ 1.04
SMARCD3-210ENST00000477169 ZNF804AQ7Z570 1209 aa21.56■■□□□ 1.04
SMARCD3-210ENST00000477169 PANK1Q8TE04 598 aa21.56■■□□□ 1.04
SMARCD3-210ENST00000477169 HDAC9Q9UKV0 1011 aa21.56■■□□□ 1.04
SMARCD3-210ENST00000477169 WNT10BO00744 389 aa21.55■■□□□ 1.04
SMARCD3-210ENST00000477169 CAPN15O75808 1086 aa21.55■■□□□ 1.04
SMARCD3-210ENST00000477169 IL1R1P14778 569 aa21.55■■□□□ 1.04
SMARCD3-210ENST00000477169 RABL6Q3YEC7 729 aaPredicted RBP21.55■■□□□ 1.04
SMARCD3-210ENST00000477169 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.55■■□□□ 1.04
SMARCD3-210ENST00000477169 A0A1B0GUL6 1792 aa21.55■■□□□ 1.04
SMARCD3-210ENST00000477169 MS4A1P11836 297 aa21.54■■□□□ 1.04
SMARCD3-210ENST00000477169 KIAA0825Q8IV33 1275 aa21.54■■□□□ 1.04
SMARCD3-210ENST00000477169 CCDC102AQ96A19 550 aa21.54■■□□□ 1.04
SMARCD3-210ENST00000477169 BICC1Q9H694 974 aaKnown RBP21.54■■□□□ 1.04
SMARCD3-210ENST00000477169 CA12O43570 354 aa21.53■■□□□ 1.04
SMARCD3-210ENST00000477169 FKBP1BP68106 108 aa21.53■■□□□ 1.04
SMARCD3-210ENST00000477169 UBE4AQ14139 1066 aa21.53■■□□□ 1.04
SMARCD3-210ENST00000477169 MEIS3Q99687 375 aa21.53■■□□□ 1.04
SMARCD3-210ENST00000477169 FKBP1AP62942 108 aaKnown RBP21.52■■□□□ 1.04
SMARCD3-210ENST00000477169 PUS3Q9BZE2 481 aaKnown RBP21.52■■□□□ 1.04
SMARCD3-210ENST00000477169 RIPOR2Q9Y4F9 1068 aa21.52■■□□□ 1.04
SMARCD3-210ENST00000477169 FAM155AB1AL88 458 aaPredicted RBP21.51■■□□□ 1.03
SMARCD3-210ENST00000477169 UBTFL1P0CB47 393 aaPredicted RBP21.51■■□□□ 1.03
SMARCD3-210ENST00000477169 ZNF157P51786 506 aaPredicted RBP21.51■■□□□ 1.03
SMARCD3-210ENST00000477169 RRP1P56182 461 aaKnown RBP21.51■■□□□ 1.03
SMARCD3-210ENST00000477169 PDE3AQ14432 1141 aa21.51■■□□□ 1.03
SMARCD3-210ENST00000477169 C20orf194Q5TEA3 1177 aa21.51■■□□□ 1.03
SMARCD3-210ENST00000477169 ITPRIPQ8IWB1 547 aa21.51■■□□□ 1.03
SMARCD3-210ENST00000477169 ANKRD44Q8N8A2 993 aa21.51■■□□□ 1.03
SMARCD3-210ENST00000477169 ZBED3Q96IU2 234 aaPredicted RBP21.51■■□□□ 1.03
SMARCD3-210ENST00000477169 MROH5Q6ZUA9 1318 aa21.51■■□□□ 1.03
SMARCD3-210ENST00000477169 SASH1O94885 1247 aa21.5■■□□□ 1.03
SMARCD3-210ENST00000477169 CERS5Q8N5B7 392 aa21.5■■□□□ 1.03
SMARCD3-210ENST00000477169 ZIC5Q96T25 663 aa21.5■■□□□ 1.03
SMARCD3-210ENST00000477169 SCAF8Q9UPN6 1271 aaKnown RBP21.5■■□□□ 1.03
SMARCD3-210ENST00000477169 GNAI3P08754 354 aa21.49■■□□□ 1.03
SMARCD3-210ENST00000477169 MTMR14Q8NCE2 650 aa21.49■■□□□ 1.03
SMARCD3-210ENST00000477169 DLGAP5Q15398 846 aa21.48■■□□□ 1.03
SMARCD3-210ENST00000477169 TDRD7Q8NHU6 1098 aaKnown RBP21.48■■□□□ 1.03
SMARCD3-210ENST00000477169 COG6Q9Y2V7 657 aa21.48■■□□□ 1.03
SMARCD3-210ENST00000477169 ZBTB7BO15156 539 aaPredicted RBP21.47■■□□□ 1.03
SMARCD3-210ENST00000477169 SLC10A3P09131 477 aa21.47■■□□□ 1.03
SMARCD3-210ENST00000477169 HIBADHP31937 336 aaKnown RBP21.47■■□□□ 1.03
SMARCD3-210ENST00000477169 MVPQ14764 893 aaKnown RBP21.47■■□□□ 1.03
SMARCD3-210ENST00000477169 PRAMEF18Q5VWM3 479 aa21.47■■□□□ 1.03
SMARCD3-210ENST00000477169 APOBEC3FQ8IUX4 373 aaKnown RBP21.47■■□□□ 1.03
SMARCD3-210ENST00000477169 FAM84BQ96KN1 310 aaPredicted RBP21.47■■□□□ 1.03
SMARCD3-210ENST00000477169 FAM205AQ6ZU69 1335 aa21.47■■□□□ 1.03
SMARCD3-210ENST00000477169 PAPPA2Q9BXP8 1791 aa21.46■■□□□ 1.03
SMARCD3-210ENST00000477169 NF2P35240 595 aa21.46■■□□□ 1.03
SMARCD3-210ENST00000477169 GYG1P46976 350 aa21.46■■□□□ 1.03
SMARCD3-210ENST00000477169 KIF23Q02241 960 aaPredicted RBP21.46■■□□□ 1.03
SMARCD3-210ENST00000477169 LRRC24Q50LG9 513 aa21.46■■□□□ 1.03
SMARCD3-210ENST00000477169 TSKSQ9UJT2 592 aa21.46■■□□□ 1.03
SMARCD3-210ENST00000477169 HDAC5Q9UQL6 1122 aa21.46■■□□□ 1.03
SMARCD3-210ENST00000477169 LRRFIP2Q9Y608 721 aaKnown RBP21.46■■□□□ 1.03
SMARCD3-210ENST00000477169 F8W031 263 aaPredicted RBP21.45■■□□□ 1.02
SMARCD3-210ENST00000477169 PDE8BO95263 885 aa21.45■■□□□ 1.02
SMARCD3-210ENST00000477169 METTL24Q5JXM2 366 aa21.45■■□□□ 1.02
SMARCD3-210ENST00000477169 REM2Q8IYK8 340 aaPredicted RBP21.44■■□□□ 1.02
SMARCD3-210ENST00000477169 JAG2Q9Y219 1238 aa21.44■■□□□ 1.02
SMARCD3-210ENST00000477169 SUPT16HQ9Y5B9 1047 aaKnown RBP21.44■■□□□ 1.02
SMARCD3-210ENST00000477169 MYO1BO43795 1136 aa21.43■■□□□ 1.02
SMARCD3-210ENST00000477169 GNAI2P04899 355 aa21.43■■□□□ 1.02
SMARCD3-210ENST00000477169 CFAP100Q494V2 611 aa21.43■■□□□ 1.02
SMARCD3-210ENST00000477169 MOB2Q70IA6 237 aa21.43■■□□□ 1.02
SMARCD3-210ENST00000477169 FBXO33Q7Z6M2 555 aa21.43■■□□□ 1.02
SMARCD3-210ENST00000477169 VGLL2Q8N8G2 317 aa21.43■■□□□ 1.02
SMARCD3-210ENST00000477169 KLHDC4Q8TBB5 520 aa21.43■■□□□ 1.02
SMARCD3-210ENST00000477169 DDX19BQ9UMR2 479 aa21.43■■□□□ 1.02
SMARCD3-210ENST00000477169 UBE2Q2LH0YL09 131 aa21.42■■□□□ 1.02
SMARCD3-210ENST00000477169 TTLL12Q14166 644 aaPredicted RBP21.42■■□□□ 1.02
SMARCD3-210ENST00000477169 CAVIN4Q5BKX8 364 aa21.42■■□□□ 1.02
SMARCD3-210ENST00000477169 MFSD14BQ5SR56 506 aa21.42■■□□□ 1.02
SMARCD3-210ENST00000477169 VPS37DQ86XT2 251 aa21.42■■□□□ 1.02
SMARCD3-210ENST00000477169 RASAL3Q86YV0 1011 aa21.42■■□□□ 1.02
SMARCD3-210ENST00000477169 CSRNP1Q96S65 589 aa21.42■■□□□ 1.02
SMARCD3-210ENST00000477169 DEFB129Q9H1M3 183 aa21.42■■□□□ 1.02
SMARCD3-210ENST00000477169 SAGE1Q9NXZ1 904 aa21.42■■□□□ 1.02
SMARCD3-210ENST00000477169 COL1A1P02452 1464 aaPredicted RBP21.41■■□□□ 1.02
SMARCD3-210ENST00000477169 SPDYE2BA6NHP3 402 aa21.41■■□□□ 1.02
SMARCD3-210ENST00000477169 SPDYE6P0CI01 402 aa21.41■■□□□ 1.02
SMARCD3-210ENST00000477169 RFX5P48382 616 aaPredicted RBP21.41■■□□□ 1.02
SMARCD3-210ENST00000477169 PRMT6Q96LA8 375 aaPredicted RBP21.41■■□□□ 1.02
SMARCD3-210ENST00000477169 PCDHAC2Q9Y5I4 1007 aa21.41■■□□□ 1.02
SMARCD3-210ENST00000477169 PPP2R3BQ9Y5P8 575 aa21.41■■□□□ 1.02
SMARCD3-210ENST00000477169 ARMC9Q7Z3E5 817 aa21.4■■□□□ 1.02
SMARCD3-210ENST00000477169 SERPINA10Q9UK55 444 aa21.4■■□□□ 1.02
SMARCD3-210ENST00000477169 ECM29Q5VYK3 1845 aa21.39■■□□□ 1.02
SMARCD3-210ENST00000477169 EYA2O00167 538 aa21.39■■□□□ 1.01
SMARCD3-210ENST00000477169 RBM5P52756 815 aaKnown RBP eCLIP21.39■■□□□ 1.01
SMARCD3-210ENST00000477169 PTPN12Q05209 780 aaKnown RBP21.39■■□□□ 1.01
SMARCD3-210ENST00000477169 C1orf115Q9H7X2 142 aa21.39■■□□□ 1.01
SMARCD3-210ENST00000477169 ZBTB40Q9NUA8 1239 aa21.39■■□□□ 1.01
SMARCD3-210ENST00000477169 RNF186Q9NXI6 227 aa21.39■■□□□ 1.01
SMARCD3-210ENST00000477169 TTF2Q9UNY4 1162 aaKnown RBP21.39■■□□□ 1.01
SMARCD3-210ENST00000477169 IFIT1P09914 478 aaKnown RBP21.38■■□□□ 1.01
SMARCD3-210ENST00000477169 FGFR2P21802 821 aa21.38■■□□□ 1.01
SMARCD3-210ENST00000477169 MTX1Q13505 466 aa21.38■■□□□ 1.01
SMARCD3-210ENST00000477169 PUM3Q15397 648 aaKnown RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms