RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 ADCK5Q3MIX3 580 aa17.36■□□□□ 0.37
COL4A6-206ENST00000477085 VPS37DQ86XT2 251 aa17.36■□□□□ 0.37
COL4A6-206ENST00000477085 C2CD5Q86YS7 1000 aa17.36■□□□□ 0.37
COL4A6-206ENST00000477085 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.36■□□□□ 0.37
COL4A6-206ENST00000477085 GNL3LQ9NVN8 582 aaKnown RBP17.36■□□□□ 0.37
COL4A6-206ENST00000477085 ATP6V0A2Q9Y487 856 aa17.36■□□□□ 0.37
COL4A6-206ENST00000477085 HSPD1P10809 573 aaKnown RBP17.35■□□□□ 0.37
COL4A6-206ENST00000477085 CHRNA5P30532 468 aa17.35■□□□□ 0.37
COL4A6-206ENST00000477085 UBE3CQ15386 1083 aa17.35■□□□□ 0.37
COL4A6-206ENST00000477085 C15orf52Q6ZUT6 534 aaKnown RBP17.35■□□□□ 0.37
COL4A6-206ENST00000477085 TBC1D16Q8TBP0 767 aa17.35■□□□□ 0.37
COL4A6-206ENST00000477085 UFL1O94874 794 aa17.35■□□□□ 0.37
COL4A6-206ENST00000477085 LRRFIP1Q32MZ4 808 aaKnown RBP17.35■□□□□ 0.37
COL4A6-206ENST00000477085 UPF3BQ9BZI7 483 aaKnown RBP17.35■□□□□ 0.37
COL4A6-206ENST00000477085 DENND2AQ9ULE3 1009 aa17.35■□□□□ 0.37
COL4A6-206ENST00000477085 LRRC37AA6NMS7 1700 aa17.35■□□□□ 0.37
COL4A6-206ENST00000477085 LTBP1Q14766 1721 aa17.35■□□□□ 0.37
COL4A6-206ENST00000477085 A0A0G2JLW4 131 aa17.34■□□□□ 0.37
COL4A6-206ENST00000477085 ATP2B4P23634 1241 aa17.34■□□□□ 0.37
COL4A6-206ENST00000477085 ALDH1B1P30837 517 aa17.34■□□□□ 0.37
COL4A6-206ENST00000477085 NEK4P51957 841 aa17.34■□□□□ 0.37
COL4A6-206ENST00000477085 ZSCAN25Q6NSZ9 544 aa17.34■□□□□ 0.37
COL4A6-206ENST00000477085 HSCBQ8IWL3 235 aa17.34■□□□□ 0.37
COL4A6-206ENST00000477085 MAGEB6Q8N7X4 407 aa17.34■□□□□ 0.37
COL4A6-206ENST00000477085 ZNF384Q8TF68 577 aa17.34■□□□□ 0.37
COL4A6-206ENST00000477085 ZNF622Q969S3 477 aaKnown RBP eCLIP17.34■□□□□ 0.37
COL4A6-206ENST00000477085 DAXXQ9UER7 740 aaPredicted RBP17.34■□□□□ 0.37
COL4A6-206ENST00000477085 GGA1Q9UJY5 639 aa17.34■□□□□ 0.37
COL4A6-206ENST00000477085 DOCK2Q92608 1830 aa17.34■□□□□ 0.37
COL4A6-206ENST00000477085 SEMA3EO15041 775 aa17.33■□□□□ 0.37
COL4A6-206ENST00000477085 ZBTB22O15209 634 aa17.33■□□□□ 0.37
COL4A6-206ENST00000477085 TMC4Q7Z404 712 aa17.33■□□□□ 0.37
COL4A6-206ENST00000477085 SLC16A10Q8TF71 515 aa17.33■□□□□ 0.37
COL4A6-206ENST00000477085 UPF1Q92900 1129 aaKnown RBP eCLIP17.33■□□□□ 0.37
COL4A6-206ENST00000477085 DSCC1Q9BVC3 393 aa17.33■□□□□ 0.37
COL4A6-206ENST00000477085 H0YIN7 160 aa17.33■□□□□ 0.36
COL4A6-206ENST00000477085 GPAA1O43292 621 aa17.33■□□□□ 0.36
COL4A6-206ENST00000477085 CPA1P15085 419 aa17.33■□□□□ 0.36
COL4A6-206ENST00000477085 MAP3K12Q12852 859 aa17.33■□□□□ 0.36
COL4A6-206ENST00000477085 STYK1Q6J9G0 422 aa17.33■□□□□ 0.36
COL4A6-206ENST00000477085 SPRYD3Q8NCJ5 442 aa17.33■□□□□ 0.36
COL4A6-206ENST00000477085 TDRD7Q8NHU6 1098 aaKnown RBP17.33■□□□□ 0.36
COL4A6-206ENST00000477085 JAG2Q9Y219 1238 aa17.33■□□□□ 0.36
COL4A6-206ENST00000477085 ADGRA1Q86SQ6 560 aa17.32■□□□□ 0.36
COL4A6-206ENST00000477085 LRP2BPQ9P2M1 347 aa17.32■□□□□ 0.36
COL4A6-206ENST00000477085 ABCF2Q9UG63 623 aa17.32■□□□□ 0.36
COL4A6-206ENST00000477085 U3KPZ7 1027 aaPredicted RBP17.32■□□□□ 0.36
COL4A6-206ENST00000477085 PDS5AQ29RF7 1337 aaKnown RBP17.31■□□□□ 0.36
COL4A6-206ENST00000477085 MYH7P12883 1935 aa17.31■□□□□ 0.36
COL4A6-206ENST00000477085 K7ELQ4 463 aaPredicted RBP17.31■□□□□ 0.36
COL4A6-206ENST00000477085 CYP21A2P08686 494 aa17.31■□□□□ 0.36
COL4A6-206ENST00000477085 TSGA10IPQ3SY00 556 aa17.31■□□□□ 0.36
COL4A6-206ENST00000477085 DUOX1Q9NRD9 1551 aa17.31■□□□□ 0.36
COL4A6-206ENST00000477085 C10orf71Q711Q0 1435 aa17.31■□□□□ 0.36
COL4A6-206ENST00000477085 FRAT2O75474 233 aaPredicted RBP17.3■□□□□ 0.36
COL4A6-206ENST00000477085 ZBTB7AO95365 584 aa17.3■□□□□ 0.36
COL4A6-206ENST00000477085 CHAF1AQ13111 956 aaPredicted RBP17.3■□□□□ 0.36
COL4A6-206ENST00000477085 TTLL5Q6EMB2 1281 aa17.3■□□□□ 0.36
COL4A6-206ENST00000477085 TTC14Q96N46 770 aa17.3■□□□□ 0.36
COL4A6-206ENST00000477085 STRBPQ96SI9 672 aaKnown RBP17.3■□□□□ 0.36
COL4A6-206ENST00000477085 RPAP1Q9BWH6 1393 aaPredicted RBP17.3■□□□□ 0.36
COL4A6-206ENST00000477085 C6orf229H3BNL8 230 aa17.3■□□□□ 0.36
COL4A6-206ENST00000477085 C7orf43Q8WVR3 580 aa17.3■□□□□ 0.36
COL4A6-206ENST00000477085 JAKMIP1Q96N16 626 aaKnown RBP17.3■□□□□ 0.36
COL4A6-206ENST00000477085 ZSWIM6Q9HCJ5 1215 aa17.3■□□□□ 0.36
COL4A6-206ENST00000477085 CD209Q9NNX6 404 aa17.3■□□□□ 0.36
COL4A6-206ENST00000477085 ST18O60284 1047 aa17.29■□□□□ 0.36
COL4A6-206ENST00000477085 FGAP02671 866 aa17.29■□□□□ 0.36
COL4A6-206ENST00000477085 IL1R1P14778 569 aa17.29■□□□□ 0.36
COL4A6-206ENST00000477085 ZKSCAN1P17029 563 aaPredicted RBP17.29■□□□□ 0.36
COL4A6-206ENST00000477085 MPNDQ8N594 471 aa17.29■□□□□ 0.36
COL4A6-206ENST00000477085 TM6SF1Q9BZW5 370 aa17.29■□□□□ 0.36
COL4A6-206ENST00000477085 RAI14Q9P0K7 980 aa17.29■□□□□ 0.36
COL4A6-206ENST00000477085 CASTP20810 708 aaKnown RBP17.28■□□□□ 0.36
COL4A6-206ENST00000477085 GRIK5Q16478 980 aa17.28■□□□□ 0.36
COL4A6-206ENST00000477085 STOX1Q6ZVD7 989 aa17.28■□□□□ 0.36
COL4A6-206ENST00000477085 ZNF804AQ7Z570 1209 aa17.28■□□□□ 0.36
COL4A6-206ENST00000477085 SLX4Q8IY92 1834 aa17.28■□□□□ 0.36
COL4A6-206ENST00000477085 CACNA1SQ13698 1873 aa17.28■□□□□ 0.36
COL4A6-206ENST00000477085 MBD4O95243 580 aa17.28■□□□□ 0.36
COL4A6-206ENST00000477085 KCNA3P22001 575 aa17.28■□□□□ 0.36
COL4A6-206ENST00000477085 CYP7A1P22680 504 aa17.28■□□□□ 0.36
COL4A6-206ENST00000477085 PRDX5P30044 214 aa17.28■□□□□ 0.36
COL4A6-206ENST00000477085 R3HDM1Q15032 1099 aaKnown RBP17.28■□□□□ 0.36
COL4A6-206ENST00000477085 RNF20Q5VTR2 975 aa17.28■□□□□ 0.36
COL4A6-206ENST00000477085 NSUN4Q96CB9 384 aaKnown RBP17.28■□□□□ 0.36
COL4A6-206ENST00000477085 ARMT1Q9H993 441 aa17.28■□□□□ 0.36
COL4A6-206ENST00000477085 ATF5Q9Y2D1 282 aaPredicted RBP17.28■□□□□ 0.36
COL4A6-206ENST00000477085 GOLGB1Q14789 3259 aaKnown RBP17.27■□□□□ 0.36
COL4A6-206ENST00000477085 RIMBP2O15034 1052 aa17.27■□□□□ 0.35
COL4A6-206ENST00000477085 MECOMQ03112 1051 aa17.27■□□□□ 0.35
COL4A6-206ENST00000477085 DPP8Q6V1X1 898 aaPredicted RBP17.27■□□□□ 0.35
COL4A6-206ENST00000477085 LCORLQ8N3X6 602 aa17.27■□□□□ 0.35
COL4A6-206ENST00000477085 MIGA1Q8NAN2 632 aa17.27■□□□□ 0.35
COL4A6-206ENST00000477085 SLKQ9H2G2 1235 aaPredicted RBP17.27■□□□□ 0.35
COL4A6-206ENST00000477085 PRKAB2O43741 272 aa17.26■□□□□ 0.35
COL4A6-206ENST00000477085 RUFY3Q7L099 469 aa17.26■□□□□ 0.35
COL4A6-206ENST00000477085 CNKSR1Q969H4 720 aa17.26■□□□□ 0.35
COL4A6-206ENST00000477085 AIDAQ96BJ3 306 aa17.26■□□□□ 0.35
COL4A6-206ENST00000477085 ZNF219Q9P2Y4 722 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms