RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 ITGBL1O95965 494 aaPredicted RBP15.48■□□□□ 0.07
APTX-220ENST00000476858 TTLL5Q6EMB2 1281 aa15.48■□□□□ 0.07
APTX-220ENST00000476858 LDHDQ86WU2 507 aa15.48■□□□□ 0.07
APTX-220ENST00000476858 SMC1BQ8NDV3 1235 aa15.48■□□□□ 0.07
APTX-220ENST00000476858 TDRD7Q8NHU6 1098 aaKnown RBP15.48■□□□□ 0.07
APTX-220ENST00000476858 DPF2Q92785 391 aa15.48■□□□□ 0.07
APTX-220ENST00000476858 ADARB2Q9NS39 739 aaKnown RBP15.48■□□□□ 0.07
APTX-220ENST00000476858 SCAF8Q9UPN6 1271 aaKnown RBP15.48■□□□□ 0.07
APTX-220ENST00000476858 TRAF5O00463 557 aa15.47■□□□□ 0.07
APTX-220ENST00000476858 ZNF609O15014 1411 aa15.47■□□□□ 0.07
APTX-220ENST00000476858 HIBADHP31937 336 aaKnown RBP15.47■□□□□ 0.07
APTX-220ENST00000476858 IL15P40933 162 aaPredicted RBP15.47■□□□□ 0.07
APTX-220ENST00000476858 TIMM10P62072 90 aa15.47■□□□□ 0.07
APTX-220ENST00000476858 PUM3Q15397 648 aaKnown RBP15.47■□□□□ 0.07
APTX-220ENST00000476858 ATP2B3Q16720 1220 aa15.47■□□□□ 0.07
APTX-220ENST00000476858 STRIP1Q5VSL9 837 aa15.47■□□□□ 0.07
APTX-220ENST00000476858 ZNF804AQ7Z570 1209 aa15.47■□□□□ 0.07
APTX-220ENST00000476858 HSPA6P17066 643 aa15.46■□□□□ 0.07
APTX-220ENST00000476858 ZNF280AP59817 542 aaPredicted RBP15.46■□□□□ 0.07
APTX-220ENST00000476858 FSTL1Q12841 308 aa15.46■□□□□ 0.07
APTX-220ENST00000476858 PDE3AQ14432 1141 aa15.46■□□□□ 0.07
APTX-220ENST00000476858 KIAA0825Q8IV33 1275 aa15.46■□□□□ 0.07
APTX-220ENST00000476858 CEP126Q9P2H0 1117 aa15.46■□□□□ 0.07
APTX-220ENST00000476858 HDAC5Q9UQL6 1122 aa15.46■□□□□ 0.07
APTX-220ENST00000476858 ARAP2Q8WZ64 1704 aa15.46■□□□□ 0.06
APTX-220ENST00000476858 CEP350Q5VT06 3117 aa15.46■□□□□ 0.06
APTX-220ENST00000476858 F8W031 263 aaPredicted RBP15.45■□□□□ 0.06
APTX-220ENST00000476858 RPS12P25398 132 aaKnown RBP15.45■□□□□ 0.06
APTX-220ENST00000476858 PHKA1P46020 1223 aa15.45■□□□□ 0.06
APTX-220ENST00000476858 CHAF1AQ13111 956 aaPredicted RBP15.45■□□□□ 0.06
APTX-220ENST00000476858 USP50Q70EL3 339 aaPredicted RBP15.45■□□□□ 0.06
APTX-220ENST00000476858 AGBL3Q8NEM8 1001 aa15.45■□□□□ 0.06
APTX-220ENST00000476858 LPIN2Q92539 896 aa15.45■□□□□ 0.06
APTX-220ENST00000476858 GLIS2Q9BZE0 524 aaPredicted RBP15.45■□□□□ 0.06
APTX-220ENST00000476858 FBXO3Q9UK99 471 aa15.45■□□□□ 0.06
APTX-220ENST00000476858 DDX19BQ9UMR2 479 aa15.45■□□□□ 0.06
APTX-220ENST00000476858 PASKQ96RG2 1323 aa15.44■□□□□ 0.06
APTX-220ENST00000476858 H7C1D1 291 aa15.44■□□□□ 0.06
APTX-220ENST00000476858 SURF6O75683 361 aaKnown RBP15.44■□□□□ 0.06
APTX-220ENST00000476858 USP17L8P0C7I0 530 aa15.44■□□□□ 0.06
APTX-220ENST00000476858 MS4A1P11836 297 aa15.44■□□□□ 0.06
APTX-220ENST00000476858 KIF4BQ2VIQ3 1234 aa15.44■□□□□ 0.06
APTX-220ENST00000476858 NBPF9Q3BBW0 867 aa15.44■□□□□ 0.06
APTX-220ENST00000476858 PNMA8AQ86V59 439 aaPredicted RBP15.44■□□□□ 0.06
APTX-220ENST00000476858 CNTROBQ8N137 903 aa15.44■□□□□ 0.06
APTX-220ENST00000476858 CRBNQ96SW2 442 aa15.44■□□□□ 0.06
APTX-220ENST00000476858 EXOC6BQ9Y2D4 811 aa15.44■□□□□ 0.06
APTX-220ENST00000476858 FAM205AQ6ZU69 1335 aa15.43■□□□□ 0.06
APTX-220ENST00000476858 A0A1B0GUL7 405 aa15.43■□□□□ 0.06
APTX-220ENST00000476858 IFIT1P09914 478 aaKnown RBP15.43■□□□□ 0.06
APTX-220ENST00000476858 SLC5A1P13866 664 aa15.43■□□□□ 0.06
APTX-220ENST00000476858 MYOZ2Q9NPC6 264 aa15.43■□□□□ 0.06
APTX-220ENST00000476858 TLR7Q9NYK1 1049 aaKnown RBP15.43■□□□□ 0.06
APTX-220ENST00000476858 PGAP2Q9UHJ9 254 aa15.43■□□□□ 0.06
APTX-220ENST00000476858 ADM5C9JUS6 153 aa15.42■□□□□ 0.06
APTX-220ENST00000476858 G3BP1Q13283 466 aaKnown RBP eCLIP15.42■□□□□ 0.06
APTX-220ENST00000476858 SCARF1Q14162 830 aa15.42■□□□□ 0.06
APTX-220ENST00000476858 PI16Q6UXB8 463 aa15.42■□□□□ 0.06
APTX-220ENST00000476858 XAGE2Q96GT9 111 aa15.42■□□□□ 0.06
APTX-220ENST00000476858 NOP58Q9Y2X3 529 aaKnown RBP15.42■□□□□ 0.06
APTX-220ENST00000476858 SPDYE2BA6NHP3 402 aa15.41■□□□□ 0.06
APTX-220ENST00000476858 SPDYE6P0CI01 402 aa15.41■□□□□ 0.06
APTX-220ENST00000476858 SPDYE2Q495Y8 402 aa15.41■□□□□ 0.06
APTX-220ENST00000476858 MFSD14BQ5SR56 506 aa15.41■□□□□ 0.06
APTX-220ENST00000476858 CCDC102BQ68D86 513 aa15.41■□□□□ 0.06
APTX-220ENST00000476858 USP48Q86UV5 1035 aa15.41■□□□□ 0.06
APTX-220ENST00000476858 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.41■□□□□ 0.06
APTX-220ENST00000476858 ZBED3Q96IU2 234 aaPredicted RBP15.41■□□□□ 0.06
APTX-220ENST00000476858 GGA3Q9NZ52 723 aa15.41■□□□□ 0.06
APTX-220ENST00000476858 PCDHB15Q9Y5E8 787 aa15.41■□□□□ 0.06
APTX-220ENST00000476858 APBB1O00213 710 aa15.4■□□□□ 0.06
APTX-220ENST00000476858 CAVIN4Q5BKX8 364 aa15.4■□□□□ 0.06
APTX-220ENST00000476858 ANGEL2Q5VTE6 544 aaKnown RBP15.4■□□□□ 0.06
APTX-220ENST00000476858 VPS37DQ86XT2 251 aa15.4■□□□□ 0.06
APTX-220ENST00000476858 NEUROD6Q96NK8 337 aa15.4■□□□□ 0.06
APTX-220ENST00000476858 DBNDD2Q9BQY9 259 aa15.4■□□□□ 0.06
APTX-220ENST00000476858 POLR2AP24928 1970 aaKnown RBP15.39■□□□□ 0.05
APTX-220ENST00000476858 WNT10BO00744 389 aa15.39■□□□□ 0.05
APTX-220ENST00000476858 APLP1P51693 650 aa15.39■□□□□ 0.05
APTX-220ENST00000476858 OS9Q13438 667 aaPredicted RBP15.39■□□□□ 0.05
APTX-220ENST00000476858 RASGRF1Q13972 1273 aa15.39■□□□□ 0.05
APTX-220ENST00000476858 TNNI3KQ59H18 835 aa15.39■□□□□ 0.05
APTX-220ENST00000476858 PRAMEF18Q5VWM3 479 aa15.39■□□□□ 0.05
APTX-220ENST00000476858 CST9Q5W186 159 aa15.39■□□□□ 0.05
APTX-220ENST00000476858 EAF2Q96CJ1 260 aaPredicted RBP15.39■□□□□ 0.05
APTX-220ENST00000476858 FPGT-TNNI3KV9GXZ4 949 aa15.39■□□□□ 0.05
APTX-220ENST00000476858 DNAJC5GQ8N7S2 189 aa15.38■□□□□ 0.05
APTX-220ENST00000476858 PRMT6Q96LA8 375 aaPredicted RBP15.38■□□□□ 0.05
APTX-220ENST00000476858 CCDC8Q9H0W5 538 aaPredicted RBP15.38■□□□□ 0.05
APTX-220ENST00000476858 IL1RAPL2Q9NP60 686 aa15.38■□□□□ 0.05
APTX-220ENST00000476858 SUPT16HQ9Y5B9 1047 aaKnown RBP15.38■□□□□ 0.05
APTX-220ENST00000476858 MYO3BQ8WXR4 1341 aa15.38■□□□□ 0.05
APTX-220ENST00000476858 MYH13Q9UKX3 1938 aa15.37■□□□□ 0.05
APTX-220ENST00000476858 FRAT2O75474 233 aaPredicted RBP15.37■□□□□ 0.05
APTX-220ENST00000476858 FKBP1AP62942 108 aaKnown RBP15.37■□□□□ 0.05
APTX-220ENST00000476858 IRX6P78412 446 aaPredicted RBP15.37■□□□□ 0.05
APTX-220ENST00000476858 CFAP100Q494V2 611 aa15.37■□□□□ 0.05
APTX-220ENST00000476858 RPAP2Q8IXW5 612 aaPredicted RBP15.37■□□□□ 0.05
APTX-220ENST00000476858 BCL11AQ9H165 835 aa15.37■□□□□ 0.05
APTX-220ENST00000476858 DBNLQ9UJU6 430 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms