RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 KIF13BQ9NQT8 1826 aa34.72■■■■□ 3.15
VEGFA-211ENST00000476772 ZSCAN25Q6NSZ9 544 aa34.71■■■■□ 3.15
VEGFA-211ENST00000476772 CNKSR1Q969H4 720 aa34.71■■■■□ 3.15
VEGFA-211ENST00000476772 DUOX1Q9NRD9 1551 aa34.7■■■■□ 3.15
VEGFA-211ENST00000476772 MAST3O60307 1309 aa34.7■■■■□ 3.15
VEGFA-211ENST00000476772 FRAT2O75474 233 aaPredicted RBP34.7■■■■□ 3.15
VEGFA-211ENST00000476772 ADD2P35612 726 aa34.7■■■■□ 3.15
VEGFA-211ENST00000476772 SLC9C2Q5TAH2 1124 aa34.7■■■■□ 3.14
VEGFA-211ENST00000476772 OSBP2Q969R2 916 aa34.7■■■■□ 3.14
VEGFA-211ENST00000476772 WWC3Q9ULE0 1092 aa34.7■■■■□ 3.14
VEGFA-211ENST00000476772 PSDA5PKW4 1024 aaPredicted RBP34.69■■■■□ 3.14
VEGFA-211ENST00000476772 C6orf229H3BNL8 230 aa34.69■■■■□ 3.14
VEGFA-211ENST00000476772 POLD1P28340 1107 aa34.69■■■■□ 3.14
VEGFA-211ENST00000476772 WASHC4Q2M389 1173 aa34.69■■■■□ 3.14
VEGFA-211ENST00000476772 ZNF804AQ7Z570 1209 aa34.69■■■■□ 3.14
VEGFA-211ENST00000476772 APPBP2Q92624 585 aa34.69■■■■□ 3.14
VEGFA-211ENST00000476772 TMX4Q9H1E5 349 aaPredicted RBP34.69■■■■□ 3.14
VEGFA-211ENST00000476772 M0R2C6 588 aa34.68■■■■□ 3.14
VEGFA-211ENST00000476772 HSPA4P34932 840 aa34.68■■■■□ 3.14
VEGFA-211ENST00000476772 MPNDQ8N594 471 aa34.68■■■■□ 3.14
VEGFA-211ENST00000476772 PALD1Q9ULE6 856 aa34.68■■■■□ 3.14
VEGFA-211ENST00000476772 PDS5AQ29RF7 1337 aaKnown RBP34.68■■■■□ 3.14
VEGFA-211ENST00000476772 ZBTB22O15209 634 aa34.67■■■■□ 3.14
VEGFA-211ENST00000476772 PDE6AP16499 860 aa34.67■■■■□ 3.14
VEGFA-211ENST00000476772 MAP3K12Q12852 859 aa34.67■■■■□ 3.14
VEGFA-211ENST00000476772 MAP4K1Q92918 833 aa34.66■■■■□ 3.14
VEGFA-211ENST00000476772 UBE3CQ15386 1083 aa34.66■■■■□ 3.14
VEGFA-211ENST00000476772 DPP8Q6V1X1 898 aaPredicted RBP34.66■■■■□ 3.14
VEGFA-211ENST00000476772 LRP2BPQ9P2M1 347 aa34.65■■■■□ 3.14
VEGFA-211ENST00000476772 ZNF532Q9HCE3 1301 aa34.65■■■■□ 3.14
VEGFA-211ENST00000476772 TCRBV5S4A2TA0A5A2 114 aa34.64■■■■□ 3.14
VEGFA-211ENST00000476772 CHAF1AQ13111 956 aaPredicted RBP34.64■■■■□ 3.14
VEGFA-211ENST00000476772 TDRD7Q8NHU6 1098 aaKnown RBP34.64■■■■□ 3.14
VEGFA-211ENST00000476772 PUS7LQ9H0K6 701 aaKnown RBP34.64■■■■□ 3.14
VEGFA-211ENST00000476772 ABCF2Q9UG63 623 aa34.64■■■■□ 3.14
VEGFA-211ENST00000476772 RBM8AQ9Y5S9 174 aaKnown RBP34.64■■■■□ 3.14
VEGFA-211ENST00000476772 MAGEB6Q8N7X4 407 aa34.63■■■■□ 3.13
VEGFA-211ENST00000476772 ZNF219Q9P2Y4 722 aaPredicted RBP34.63■■■■□ 3.13
VEGFA-211ENST00000476772 ANAPC15P60006 121 aa34.63■■■■□ 3.13
VEGFA-211ENST00000476772 DPEP1P16444 411 aa34.62■■■■□ 3.13
VEGFA-211ENST00000476772 CD209Q9NNX6 404 aa34.62■■■■□ 3.13
VEGFA-211ENST00000476772 A0A0G2JLW4 131 aa34.61■■■■□ 3.13
VEGFA-211ENST00000476772 C7orf43Q8WVR3 580 aa34.61■■■■□ 3.13
VEGFA-211ENST00000476772 KIAA1551Q9HCM1 1747 aa34.61■■■■□ 3.13
VEGFA-211ENST00000476772 RABEP1Q15276 862 aa34.6■■■■□ 3.13
VEGFA-211ENST00000476772 JAG2Q9Y219 1238 aa34.6■■■■□ 3.13
VEGFA-211ENST00000476772 KCNA3P22001 575 aa34.6■■■■□ 3.13
VEGFA-211ENST00000476772 NECTIN1Q15223 517 aa34.6■■■■□ 3.13
VEGFA-211ENST00000476772 VPS53Q5VIR6 699 aa34.6■■■■□ 3.13
VEGFA-211ENST00000476772 RIMBP2O15034 1052 aa34.59■■■■□ 3.13
VEGFA-211ENST00000476772 IL1R1P14778 569 aa34.59■■■■□ 3.13
VEGFA-211ENST00000476772 IL17RAQ96F46 866 aa34.59■■■■□ 3.13
VEGFA-211ENST00000476772 SGIP1Q9BQI5 828 aa34.59■■■■□ 3.13
VEGFA-211ENST00000476772 RAI14Q9P0K7 980 aa34.59■■■■□ 3.13
VEGFA-211ENST00000476772 TTLL6Q8N841 843 aa34.58■■■■□ 3.13
VEGFA-211ENST00000476772 SNX14Q9Y5W7 946 aa34.58■■■■□ 3.13
VEGFA-211ENST00000476772 GPAA1O43292 621 aa34.57■■■■□ 3.13
VEGFA-211ENST00000476772 RASEFQ8IZ41 740 aa34.57■■■■□ 3.13
VEGFA-211ENST00000476772 DSCC1Q9BVC3 393 aa34.57■■■■□ 3.12
VEGFA-211ENST00000476772 HSPD1P10809 573 aaKnown RBP34.56■■■■□ 3.12
VEGFA-211ENST00000476772 BECN1Q14457 450 aa34.56■■■■□ 3.12
VEGFA-211ENST00000476772 CREB3L3Q68CJ9 461 aa34.56■■■■□ 3.12
VEGFA-211ENST00000476772 KCNB2Q92953 911 aa34.56■■■■□ 3.12
VEGFA-211ENST00000476772 TBC1D2Q9BYX2 928 aa34.56■■■■□ 3.12
VEGFA-211ENST00000476772 ZC3H12CQ9C0D7 883 aaKnown RBP34.56■■■■□ 3.12
VEGFA-211ENST00000476772 SNED1Q8TER0 1413 aa34.56■■■■□ 3.12
VEGFA-211ENST00000476772 TGFB2P61812 414 aa34.55■■■■□ 3.12
VEGFA-211ENST00000476772 ERICH6Q7L0X2 663 aa34.55■■■■□ 3.12
VEGFA-211ENST00000476772 U3KPZ7 1027 aaPredicted RBP34.55■■■■□ 3.12
VEGFA-211ENST00000476772 MAST2Q6P0Q8 1798 aa34.55■■■■□ 3.12
VEGFA-211ENST00000476772 SALL1Q9NSC2 1324 aa34.54■■■■□ 3.12
VEGFA-211ENST00000476772 SLC4A3P48751 1232 aa34.54■■■■□ 3.12
VEGFA-211ENST00000476772 WDR66Q8TBY9 1149 aa34.54■■■■□ 3.12
VEGFA-211ENST00000476772 EYA3Q99504 573 aa34.54■■■■□ 3.12
VEGFA-211ENST00000476772 SLC27A2O14975 620 aa34.54■■■■□ 3.12
VEGFA-211ENST00000476772 C21orf2O43822 256 aa34.54■■■■□ 3.12
VEGFA-211ENST00000476772 CC2D2BQ6DHV5 1058 aa34.54■■■■□ 3.12
VEGFA-211ENST00000476772 COA1Q9GZY4 146 aa34.54■■■■□ 3.12
VEGFA-211ENST00000476772 CYP7A1P22680 504 aa34.53■■■■□ 3.12
VEGFA-211ENST00000476772 PRDX5P30044 214 aa34.53■■■■□ 3.12
VEGFA-211ENST00000476772 PTGER2P43116 358 aa34.53■■■■□ 3.12
VEGFA-211ENST00000476772 ILDR2Q71H61 639 aa34.52■■■■□ 3.12
VEGFA-211ENST00000476772 SNX21Q969T3 373 aa34.52■■■■□ 3.12
VEGFA-211ENST00000476772 AIDAQ96BJ3 306 aa34.52■■■■□ 3.12
VEGFA-211ENST00000476772 RTFDC1Q9BY42 306 aaPredicted RBP34.52■■■■□ 3.12
VEGFA-211ENST00000476772 FOXP2O15409 715 aa34.51■■■■□ 3.12
VEGFA-211ENST00000476772 ZGPATQ8N5A5 531 aaKnown RBP34.51■■■■□ 3.12
VEGFA-211ENST00000476772 ZNF384Q8TF68 577 aa34.51■■■■□ 3.12
VEGFA-211ENST00000476772 CCDC88AQ3V6T2 1871 aa34.51■■■■□ 3.11
VEGFA-211ENST00000476772 CD2BP2O95400 341 aaKnown RBP34.5■■■■□ 3.11
VEGFA-211ENST00000476772 RNF20Q5VTR2 975 aa34.5■■■■□ 3.11
VEGFA-211ENST00000476772 ADGRA1Q86SQ6 560 aa34.5■■■■□ 3.11
VEGFA-211ENST00000476772 NSUN4Q96CB9 384 aaKnown RBP34.5■■■■□ 3.11
VEGFA-211ENST00000476772 CHD4Q14839 1912 aa34.5■■■■□ 3.11
VEGFA-211ENST00000476772 MBD4O95243 580 aa34.5■■■■□ 3.11
VEGFA-211ENST00000476772 MECOMQ03112 1051 aa34.5■■■■□ 3.11
VEGFA-211ENST00000476772 NAA16Q6N069 864 aaPredicted RBP34.5■■■■□ 3.11
VEGFA-211ENST00000476772 PPP1R1BQ9UD71 204 aaPredicted RBP34.5■■■■□ 3.11
VEGFA-211ENST00000476772 DAXXQ9UER7 740 aaPredicted RBP34.5■■■■□ 3.11
VEGFA-211ENST00000476772 ZKSCAN1P17029 563 aaPredicted RBP34.49■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 359.3 ms