RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 STK31Q9BXU1 1019 aa15.35■□□□□ 0.05
HDAC6-219ENST00000476625 TRIM17Q9Y577 477 aa15.35■□□□□ 0.05
HDAC6-219ENST00000476625 F6X3S4 739 aa15.34■□□□□ 0.05
HDAC6-219ENST00000476625 CSF1RP07333 972 aa15.34■□□□□ 0.05
HDAC6-219ENST00000476625 FLIIQ13045 1269 aa15.34■□□□□ 0.05
HDAC6-219ENST00000476625 DLGAP5Q15398 846 aa15.34■□□□□ 0.05
HDAC6-219ENST00000476625 CFAP100Q494V2 611 aa15.34■□□□□ 0.05
HDAC6-219ENST00000476625 EPHA10Q5JZY3 1008 aa15.34■□□□□ 0.05
HDAC6-219ENST00000476625 OTOP1Q7RTM1 612 aa15.34■□□□□ 0.05
HDAC6-219ENST00000476625 CD99L2Q8TCZ2 262 aa15.34■□□□□ 0.05
HDAC6-219ENST00000476625 PRMT6Q96LA8 375 aaPredicted RBP15.34■□□□□ 0.05
HDAC6-219ENST00000476625 VEZTQ9HBM0 779 aa15.34■□□□□ 0.05
HDAC6-219ENST00000476625 PCDH10Q9P2E7 1040 aa15.34■□□□□ 0.05
HDAC6-219ENST00000476625 COL1A1P02452 1464 aaPredicted RBP15.33■□□□□ 0.05
HDAC6-219ENST00000476625 PLIN1O60240 522 aa15.33■□□□□ 0.04
HDAC6-219ENST00000476625 FOXO4P98177 505 aa15.33■□□□□ 0.04
HDAC6-219ENST00000476625 CNKSR2Q8WXI2 1034 aa15.33■□□□□ 0.04
HDAC6-219ENST00000476625 PLA2G12BQ9BX93 195 aa15.33■□□□□ 0.04
HDAC6-219ENST00000476625 ANKRD2Q9GZV1 360 aa15.33■□□□□ 0.04
HDAC6-219ENST00000476625 CHMP3Q9Y3E7 222 aa15.33■□□□□ 0.04
HDAC6-219ENST00000476625 HTTP42858 3142 aa15.33■□□□□ 0.04
HDAC6-219ENST00000476625 FKBP5Q13451 457 aaPredicted RBP15.32■□□□□ 0.04
HDAC6-219ENST00000476625 WWC1Q8IX03 1113 aa15.32■□□□□ 0.04
HDAC6-219ENST00000476625 DNAAF4Q8WXU2 420 aa15.32■□□□□ 0.04
HDAC6-219ENST00000476625 SLC10A4Q96EP9 437 aa15.32■□□□□ 0.04
HDAC6-219ENST00000476625 PTPN18Q99952 460 aa15.32■□□□□ 0.04
HDAC6-219ENST00000476625 CFHR5Q9BXR6 569 aa15.32■□□□□ 0.04
HDAC6-219ENST00000476625 SALL2Q9Y467 1007 aaPredicted RBP15.32■□□□□ 0.04
HDAC6-219ENST00000476625 CACNA1FO60840 1977 aa15.32■□□□□ 0.04
HDAC6-219ENST00000476625 ANKRD18BA2A2Z9 1011 aa15.31■□□□□ 0.04
HDAC6-219ENST00000476625 SPDYE2BA6NHP3 402 aa15.31■□□□□ 0.04
HDAC6-219ENST00000476625 SPDYE6P0CI01 402 aa15.31■□□□□ 0.04
HDAC6-219ENST00000476625 CRHR2Q13324 411 aa15.31■□□□□ 0.04
HDAC6-219ENST00000476625 NOM1Q5C9Z4 860 aaKnown RBP15.31■□□□□ 0.04
HDAC6-219ENST00000476625 ELP3Q9H9T3 547 aa15.31■□□□□ 0.04
HDAC6-219ENST00000476625 FANCIQ9NVI1 1328 aa15.31■□□□□ 0.04
HDAC6-219ENST00000476625 MANSC4A6NHS7 340 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-219ENST00000476625 USP2O75604 605 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-219ENST00000476625 GRIK5Q16478 980 aa15.3■□□□□ 0.04
HDAC6-219ENST00000476625 MAP3K11Q16584 847 aa15.3■□□□□ 0.04
HDAC6-219ENST00000476625 EN2P19622 333 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-219ENST00000476625 RBM5P52756 815 aaKnown RBP eCLIP15.29■□□□□ 0.04
HDAC6-219ENST00000476625 RASA3Q14644 834 aa15.29■□□□□ 0.04
HDAC6-219ENST00000476625 LINS1Q8NG48 757 aa15.29■□□□□ 0.04
HDAC6-219ENST00000476625 MYCP01106 439 aaPredicted RBP15.28■□□□□ 0.04
HDAC6-219ENST00000476625 IL1R1P14778 569 aa15.28■□□□□ 0.04
HDAC6-219ENST00000476625 LMBR1LQ6UX01 489 aa15.28■□□□□ 0.04
HDAC6-219ENST00000476625 MTMR14Q8NCE2 650 aa15.28■□□□□ 0.04
HDAC6-219ENST00000476625 MYH16Q9H6N6 1097 aa15.28■□□□□ 0.04
HDAC6-219ENST00000476625 TDRD3Q9H7E2 651 aaKnown RBP15.28■□□□□ 0.04
HDAC6-219ENST00000476625 SPINK5Q9NQ38 1064 aaPredicted RBP15.28■□□□□ 0.04
HDAC6-219ENST00000476625 PTPN22Q9Y2R2 807 aa15.28■□□□□ 0.04
HDAC6-219ENST00000476625 ECM2O94769 699 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-219ENST00000476625 ZBTB48P10074 688 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-219ENST00000476625 GYG1P46976 350 aa15.27■□□□□ 0.04
HDAC6-219ENST00000476625 EXOSC9Q06265 439 aaKnown RBP15.27■□□□□ 0.04
HDAC6-219ENST00000476625 IFIT5Q13325 482 aaKnown RBP15.27■□□□□ 0.04
HDAC6-219ENST00000476625 OPTNQ96CV9 577 aa15.27■□□□□ 0.04
HDAC6-219ENST00000476625 PUS3Q9BZE2 481 aaKnown RBP15.27■□□□□ 0.04
HDAC6-219ENST00000476625 IQSEC3Q9UPP2 1182 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-219ENST00000476625 CENPFP49454 3210 aa15.26■□□□□ 0.03
HDAC6-219ENST00000476625 TCP10L2B9ZVM9 353 aa15.26■□□□□ 0.03
HDAC6-219ENST00000476625 PPP1R12BO60237 982 aaPredicted RBP15.26■□□□□ 0.03
HDAC6-219ENST00000476625 VAMP4O75379 141 aa15.26■□□□□ 0.03
HDAC6-219ENST00000476625 ALDH1A1P00352 501 aa15.26■□□□□ 0.03
HDAC6-219ENST00000476625 CACNB3P54284 484 aa15.26■□□□□ 0.03
HDAC6-219ENST00000476625 BEND3Q5T5X7 828 aa15.26■□□□□ 0.03
HDAC6-219ENST00000476625 C15orf52Q6ZUT6 534 aaKnown RBP15.26■□□□□ 0.03
HDAC6-219ENST00000476625 ZNF804AQ7Z570 1209 aa15.26■□□□□ 0.03
HDAC6-219ENST00000476625 ZNF70Q9UC06 446 aaPredicted RBP15.26■□□□□ 0.03
HDAC6-219ENST00000476625 TEPSINQ96N21 525 aa15.25■□□□□ 0.03
HDAC6-219ENST00000476625 TMEM39BQ9GZU3 492 aa15.25■□□□□ 0.03
HDAC6-219ENST00000476625 MYH13Q9UKX3 1938 aa15.25■□□□□ 0.03
HDAC6-219ENST00000476625 MKI67P46013 3256 aaKnown RBP15.25■□□□□ 0.03
HDAC6-219ENST00000476625 BRCA2P51587 3418 aa15.24■□□□□ 0.03
HDAC6-219ENST00000476625 IREB2P48200 963 aaKnown RBP15.24■□□□□ 0.03
HDAC6-219ENST00000476625 CCDC27Q2M243 656 aa15.24■□□□□ 0.03
HDAC6-219ENST00000476625 SPDYE2Q495Y8 402 aa15.24■□□□□ 0.03
HDAC6-219ENST00000476625 HABP4Q5JVS0 413 aaKnown RBP15.24■□□□□ 0.03
HDAC6-219ENST00000476625 MFSD14BQ5SR56 506 aa15.24■□□□□ 0.03
HDAC6-219ENST00000476625 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.24■□□□□ 0.03
HDAC6-219ENST00000476625 BRI3BPQ8WY22 251 aa15.24■□□□□ 0.03
HDAC6-219ENST00000476625 MS4A4AQ96JQ5 239 aa15.24■□□□□ 0.03
HDAC6-219ENST00000476625 ARHGAP39Q9C0H5 1083 aa15.24■□□□□ 0.03
HDAC6-219ENST00000476625 CNNM1Q9NRU3 951 aa15.24■□□□□ 0.03
HDAC6-219ENST00000476625 TTF2Q9UNY4 1162 aaKnown RBP15.24■□□□□ 0.03
HDAC6-219ENST00000476625 PPP2R3BQ9Y5P8 575 aa15.24■□□□□ 0.03
HDAC6-219ENST00000476625 MYO1BO43795 1136 aa15.23■□□□□ 0.03
HDAC6-219ENST00000476625 VGLL4Q14135 290 aa15.23■□□□□ 0.03
HDAC6-219ENST00000476625 SUPT20HL1Q3ZLR7 823 aa15.23■□□□□ 0.03
HDAC6-219ENST00000476625 TAF7LQ5H9L4 462 aa15.23■□□□□ 0.03
HDAC6-219ENST00000476625 LDHAL6AQ6ZMR3 332 aa15.23■□□□□ 0.03
HDAC6-219ENST00000476625 ANKRD13AQ8IZ07 590 aa15.23■□□□□ 0.03
HDAC6-219ENST00000476625 FAM43AQ8N2R8 423 aa15.23■□□□□ 0.03
HDAC6-219ENST00000476625 ERO1AQ96HE7 468 aa15.23■□□□□ 0.03
HDAC6-219ENST00000476625 KAZALD1Q96I82 304 aa15.23■□□□□ 0.03
HDAC6-219ENST00000476625 SUCLG2Q96I99 432 aa15.23■□□□□ 0.03
HDAC6-219ENST00000476625 EFCC1Q9HA90 598 aa15.23■□□□□ 0.03
HDAC6-219ENST00000476625 PTCH2Q9Y6C5 1203 aa15.23■□□□□ 0.03
HDAC6-219ENST00000476625 TESPA1A2RU30 521 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms