RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 ASTN2O75129 1339 aaPredicted RBP13.55□□□□□ -0.24
CALD1-217ENST00000475772 CCDC85CA6NKD9 419 aa13.54□□□□□ -0.24
CALD1-217ENST00000475772 ELL2O00472 640 aaPredicted RBP13.54□□□□□ -0.24
CALD1-217ENST00000475772 HUNKP57058 714 aa13.54□□□□□ -0.24
CALD1-217ENST00000475772 WDR43Q15061 677 aaKnown RBP eCLIP13.54□□□□□ -0.24
CALD1-217ENST00000475772 TYW1BQ6NUM6 668 aa13.54□□□□□ -0.24
CALD1-217ENST00000475772 RIC3Q7Z5B4 369 aa13.54□□□□□ -0.24
CALD1-217ENST00000475772 C8orf58Q8NAV2 365 aa13.54□□□□□ -0.24
CALD1-217ENST00000475772 PSME4Q14997 1843 aa13.53□□□□□ -0.24
CALD1-217ENST00000475772 TESPA1A2RU30 521 aaPredicted RBP13.53□□□□□ -0.24
CALD1-217ENST00000475772 WTIPA6NIX2 430 aaPredicted RBP13.53□□□□□ -0.24
CALD1-217ENST00000475772 ADM5C9JUS6 153 aa13.53□□□□□ -0.24
CALD1-217ENST00000475772 APAF1O14727 1248 aa13.53□□□□□ -0.24
CALD1-217ENST00000475772 CA12O43570 354 aa13.53□□□□□ -0.24
CALD1-217ENST00000475772 RPS12P25398 132 aaKnown RBP13.53□□□□□ -0.24
CALD1-217ENST00000475772 KRT26Q7Z3Y9 468 aa13.53□□□□□ -0.24
CALD1-217ENST00000475772 EYA3Q99504 573 aa13.53□□□□□ -0.24
CALD1-217ENST00000475772 MYD88Q99836 296 aa13.53□□□□□ -0.24
CALD1-217ENST00000475772 ADAM33Q9BZ11 813 aa13.53□□□□□ -0.24
CALD1-217ENST00000475772 MCOLN1Q9GZU1 580 aa13.53□□□□□ -0.24
CALD1-217ENST00000475772 PCCAP05165 728 aaPredicted RBP13.52□□□□□ -0.25
CALD1-217ENST00000475772 OSBPP22059 807 aa13.52□□□□□ -0.25
CALD1-217ENST00000475772 NOGQ13253 232 aa13.52□□□□□ -0.25
CALD1-217ENST00000475772 NBR1Q14596 966 aa13.52□□□□□ -0.25
CALD1-217ENST00000475772 RGMBQ6NW40 437 aa13.52□□□□□ -0.25
CALD1-217ENST00000475772 FBXW7Q969H0 707 aa13.52□□□□□ -0.25
CALD1-217ENST00000475772 ZC3H12CQ9C0D7 883 aaKnown RBP13.52□□□□□ -0.25
CALD1-217ENST00000475772 GBA2Q9HCG7 927 aaPredicted RBP13.52□□□□□ -0.25
CALD1-217ENST00000475772 AKAP11Q9UKA4 1901 aa13.52□□□□□ -0.25
CALD1-217ENST00000475772 PDE8AO60658 829 aa13.51□□□□□ -0.25
CALD1-217ENST00000475772 KIF4BQ2VIQ3 1234 aa13.51□□□□□ -0.25
CALD1-217ENST00000475772 TSPYL6Q8N831 410 aa13.51□□□□□ -0.25
CALD1-217ENST00000475772 CCDC191Q8NCU4 936 aa13.51□□□□□ -0.25
CALD1-217ENST00000475772 DCPSQ96C86 337 aaKnown RBP13.51□□□□□ -0.25
CALD1-217ENST00000475772 CCDC85AQ96PX6 553 aaPredicted RBP13.51□□□□□ -0.25
CALD1-217ENST00000475772 GMLQ99445 158 aa13.51□□□□□ -0.25
CALD1-217ENST00000475772 PRKRIP1Q9H875 184 aaPredicted RBP13.51□□□□□ -0.25
CALD1-217ENST00000475772 IFT57Q9NWB7 429 aa13.51□□□□□ -0.25
CALD1-217ENST00000475772 UFL1O94874 794 aa13.5□□□□□ -0.25
CALD1-217ENST00000475772 ZNF280AP59817 542 aaPredicted RBP13.5□□□□□ -0.25
CALD1-217ENST00000475772 KIF23Q02241 960 aaPredicted RBP13.5□□□□□ -0.25
CALD1-217ENST00000475772 METTL22Q9BUU2 404 aaPredicted RBP13.5□□□□□ -0.25
CALD1-217ENST00000475772 KRTAP3-3Q9BYR6 98 aa13.5□□□□□ -0.25
CALD1-217ENST00000475772 KRTAP3-2Q9BYR7 98 aa13.5□□□□□ -0.25
CALD1-217ENST00000475772 PCDH10Q9P2E7 1040 aa13.5□□□□□ -0.25
CALD1-217ENST00000475772 ZNF646O15015 1829 aaPredicted RBP13.49□□□□□ -0.25
CALD1-217ENST00000475772 PBX2P40425 430 aa13.49□□□□□ -0.25
CALD1-217ENST00000475772 GNAI1P63096 354 aa13.49□□□□□ -0.25
CALD1-217ENST00000475772 DGKZQ13574 1117 aa13.49□□□□□ -0.25
CALD1-217ENST00000475772 SCARF1Q14162 830 aa13.49□□□□□ -0.25
CALD1-217ENST00000475772 RSBN1LQ6PCB5 846 aaPredicted RBP13.49□□□□□ -0.25
CALD1-217ENST00000475772 C2orf69Q8N8R5 385 aa13.49□□□□□ -0.25
CALD1-217ENST00000475772 CSRNP1Q96S65 589 aa13.49□□□□□ -0.25
CALD1-217ENST00000475772 GGA3Q9NZ52 723 aa13.49□□□□□ -0.25
CALD1-217ENST00000475772 ANKIB1Q9P2G1 1089 aa13.49□□□□□ -0.25
CALD1-217ENST00000475772 GGA1Q9UJY5 639 aa13.49□□□□□ -0.25
CALD1-217ENST00000475772 IGKV5-2P06315 115 aa13.48□□□□□ -0.25
CALD1-217ENST00000475772 ZNF157P51786 506 aaPredicted RBP13.48□□□□□ -0.25
CALD1-217ENST00000475772 MLLT1Q03111 559 aaPredicted RBP13.48□□□□□ -0.25
CALD1-217ENST00000475772 CCDC152Q4G0S7 254 aa13.48□□□□□ -0.25
CALD1-217ENST00000475772 AGBL3Q8NEM8 1001 aa13.48□□□□□ -0.25
CALD1-217ENST00000475772 CCDC102AQ96A19 550 aa13.48□□□□□ -0.25
CALD1-217ENST00000475772 CDCA5Q96FF9 252 aa13.48□□□□□ -0.25
CALD1-217ENST00000475772 CWC25Q9NXE8 425 aaPredicted RBP13.48□□□□□ -0.25
CALD1-217ENST00000475772 RNF186Q9NXI6 227 aa13.48□□□□□ -0.25
CALD1-217ENST00000475772 SCAF8Q9UPN6 1271 aaKnown RBP13.48□□□□□ -0.25
CALD1-217ENST00000475772 TNRC18O15417 2968 aaPredicted RBP13.48□□□□□ -0.25
CALD1-217ENST00000475772 MYH3P11055 1940 aa13.48□□□□□ -0.25
CALD1-217ENST00000475772 ZNF609O15014 1411 aa13.47□□□□□ -0.25
CALD1-217ENST00000475772 ARHGAP33O14559 1287 aa13.47□□□□□ -0.25
CALD1-217ENST00000475772 SLC10A3P09131 477 aa13.47□□□□□ -0.25
CALD1-217ENST00000475772 ANGEL2Q5VTE6 544 aaKnown RBP13.47□□□□□ -0.25
CALD1-217ENST00000475772 TTLL11Q8NHH1 800 aa13.47□□□□□ -0.25
CALD1-217ENST00000475772 MAP3K2Q9Y2U5 619 aa13.47□□□□□ -0.25
CALD1-217ENST00000475772 PI4KAP2A4QPH2 592 aa13.46□□□□□ -0.25
CALD1-217ENST00000475772 TRPA1O75762 1119 aa13.46□□□□□ -0.25
CALD1-217ENST00000475772 ATP2B4P23634 1241 aa13.46□□□□□ -0.25
CALD1-217ENST00000475772 CCDC184Q52MB2 194 aa13.46□□□□□ -0.25
CALD1-217ENST00000475772 KSR2Q6VAB6 950 aa13.46□□□□□ -0.25
CALD1-217ENST00000475772 MOB2Q70IA6 237 aa13.46□□□□□ -0.25
CALD1-217ENST00000475772 ANKRD18AQ8IVF6 992 aa13.46□□□□□ -0.25
CALD1-217ENST00000475772 SULF1Q8IWU6 871 aa13.46□□□□□ -0.25
CALD1-217ENST00000475772 PI4KAP1Q8N8J0 262 aa13.46□□□□□ -0.25
CALD1-217ENST00000475772 MXD3Q9BW11 206 aa13.46□□□□□ -0.25
CALD1-217ENST00000475772 MINPP1Q9UNW1 487 aa13.46□□□□□ -0.25
CALD1-217ENST00000475772 PDE4DIPQ5VU43 2346 aa13.46□□□□□ -0.26
CALD1-217ENST00000475772 SPEF2Q9C093 1822 aa13.46□□□□□ -0.26
CALD1-217ENST00000475772 XDHP47989 1333 aa13.45□□□□□ -0.26
CALD1-217ENST00000475772 HSP90B1P14625 803 aaKnown RBP13.45□□□□□ -0.26
CALD1-217ENST00000475772 CCDC30Q5VVM6 783 aa13.45□□□□□ -0.26
CALD1-217ENST00000475772 G2E3Q7L622 706 aa13.45□□□□□ -0.26
CALD1-217ENST00000475772 PODNQ7Z5L7 613 aa13.45□□□□□ -0.26
CALD1-217ENST00000475772 TXNRD3Q86VQ6 643 aa13.45□□□□□ -0.26
CALD1-217ENST00000475772 GREM2Q9H772 168 aa13.45□□□□□ -0.26
CALD1-217ENST00000475772 MYOZ2Q9NPC6 264 aa13.45□□□□□ -0.26
CALD1-217ENST00000475772 SAGE1Q9NXZ1 904 aa13.45□□□□□ -0.26
CALD1-217ENST00000475772 USP17L3A6NCW0 530 aa13.44□□□□□ -0.26
CALD1-217ENST00000475772 USP17L4A6NCW7 530 aa13.44□□□□□ -0.26
CALD1-217ENST00000475772 H7C1W4 665 aa13.44□□□□□ -0.26
CALD1-217ENST00000475772 USP17L8P0C7I0 530 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms