RNA–Protein interactions for RNA: ENST00000474986.2

YIF1A-206, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 1 (best)

Gene YIF1A, Length 860 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-206ENST00000474986 FRAT2O75474 233 aaPredicted RBP28.11■■■□□ 2.09
YIF1A-206ENST00000474986 TOMM70O94826 608 aa28.11■■■□□ 2.09
YIF1A-206ENST00000474986 ADORA1P30542 326 aa28.11■■■□□ 2.09
YIF1A-206ENST00000474986 CCDC102BQ68D86 513 aa28.11■■■□□ 2.09
YIF1A-206ENST00000474986 EXOC6Q8TAG9 804 aa28.11■■■□□ 2.09
YIF1A-206ENST00000474986 ARAP2Q8WZ64 1704 aa28.1■■■□□ 2.09
YIF1A-206ENST00000474986 USP50Q70EL3 339 aaPredicted RBP28.1■■■□□ 2.09
YIF1A-206ENST00000474986 DCTPP1Q9H773 170 aa28.1■■■□□ 2.09
YIF1A-206ENST00000474986 USP17L8P0C7I0 530 aa28.09■■■□□ 2.09
YIF1A-206ENST00000474986 PHKA1P46020 1223 aa28.09■■■□□ 2.09
YIF1A-206ENST00000474986 ZNF280AP59817 542 aaPredicted RBP28.09■■■□□ 2.09
YIF1A-206ENST00000474986 RBM46Q8TBY0 533 aaKnown RBP28.09■■■□□ 2.09
YIF1A-206ENST00000474986 TBC1D22AQ8WUA7 517 aa28.09■■■□□ 2.09
YIF1A-206ENST00000474986 GORABQ5T7V8 394 aa28.08■■■□□ 2.09
YIF1A-206ENST00000474986 IQSEC3Q9UPP2 1182 aaPredicted RBP28.08■■■□□ 2.09
YIF1A-206ENST00000474986 ZNF646O15015 1829 aaPredicted RBP28.07■■■□□ 2.08
YIF1A-206ENST00000474986 HDAC1Q13547 482 aaPredicted RBP28.07■■■□□ 2.08
YIF1A-206ENST00000474986 CERS5Q8N5B7 392 aa28.07■■■□□ 2.08
YIF1A-206ENST00000474986 EAF2Q96CJ1 260 aaPredicted RBP28.07■■■□□ 2.08
YIF1A-206ENST00000474986 MXD3Q9BW11 206 aa28.07■■■□□ 2.08
YIF1A-206ENST00000474986 DENND2AQ9ULE3 1009 aa28.07■■■□□ 2.08
YIF1A-206ENST00000474986 MFSD14BQ5SR56 506 aa28.06■■■□□ 2.08
YIF1A-206ENST00000474986 LDHDQ86WU2 507 aa28.06■■■□□ 2.08
YIF1A-206ENST00000474986 CLASRPQ8N2M8 674 aaKnown RBP28.06■■■□□ 2.08
YIF1A-206ENST00000474986 OGFOD1Q8N543 542 aa28.06■■■□□ 2.08
YIF1A-206ENST00000474986 WDR66Q8TBY9 1149 aa28.06■■■□□ 2.08
YIF1A-206ENST00000474986 PDS5AQ29RF7 1337 aaKnown RBP28.06■■■□□ 2.08
YIF1A-206ENST00000474986 CHAF1AQ13111 956 aaPredicted RBP28.05■■■□□ 2.08
YIF1A-206ENST00000474986 EAPPQ56P03 285 aaPredicted RBP28.05■■■□□ 2.08
YIF1A-206ENST00000474986 DBNDD2Q9BQY9 259 aa28.05■■■□□ 2.08
YIF1A-206ENST00000474986 SHTN1A0MZ66 631 aa28.04■■■□□ 2.08
YIF1A-206ENST00000474986 UQCRFS1P1P0C7P4 283 aa28.04■■■□□ 2.08
YIF1A-206ENST00000474986 LRRCC1Q9C099 1032 aa28.04■■■□□ 2.08
YIF1A-206ENST00000474986 DBNLQ9UJU6 430 aaKnown RBP28.04■■■□□ 2.08
YIF1A-206ENST00000474986 HDAC9Q9UKV0 1011 aa28.04■■■□□ 2.08
YIF1A-206ENST00000474986 JAG2Q9Y219 1238 aa28.04■■■□□ 2.08
YIF1A-206ENST00000474986 SUGT1Q9Y2Z0 365 aa28.04■■■□□ 2.08
YIF1A-206ENST00000474986 APBB1O00213 710 aa28.03■■■□□ 2.08
YIF1A-206ENST00000474986 CENPBP07199 599 aaPredicted RBP28.03■■■□□ 2.08
YIF1A-206ENST00000474986 ARID4AP29374 1257 aaPredicted RBP28.03■■■□□ 2.08
YIF1A-206ENST00000474986 FSTL1Q12841 308 aa28.03■■■□□ 2.08
YIF1A-206ENST00000474986 CCDC158Q5M9N0 1113 aa28.03■■■□□ 2.08
YIF1A-206ENST00000474986 AACSQ86V21 672 aa28.03■■■□□ 2.08
YIF1A-206ENST00000474986 KIAA0825Q8IV33 1275 aa28.03■■■□□ 2.08
YIF1A-206ENST00000474986 SMC1BQ8NDV3 1235 aa28.03■■■□□ 2.08
YIF1A-206ENST00000474986 ZC3H15Q8WU90 426 aaKnown RBP28.03■■■□□ 2.08
YIF1A-206ENST00000474986 ZNF512BQ96KM6 892 aaPredicted RBP28.03■■■□□ 2.08
YIF1A-206ENST00000474986 IL1RAPL2Q9NP60 686 aa28.03■■■□□ 2.08
YIF1A-206ENST00000474986 RASGRF1Q13972 1273 aa28.02■■■□□ 2.08
YIF1A-206ENST00000474986 TRPM4Q8TD43 1214 aa28.02■■■□□ 2.08
YIF1A-206ENST00000474986 COL1A1P02452 1464 aaPredicted RBP28.02■■■□□ 2.08
YIF1A-206ENST00000474986 SALL1Q9NSC2 1324 aa28.01■■■□□ 2.07
YIF1A-206ENST00000474986 POTEIP0CG38 1075 aa28.01■■■□□ 2.07
YIF1A-206ENST00000474986 POTEJP0CG39 1038 aa28.01■■■□□ 2.07
YIF1A-206ENST00000474986 CHADLQ6NUI6 762 aa28.01■■■□□ 2.07
YIF1A-206ENST00000474986 SAMD7Q7Z3H4 446 aa28.01■■■□□ 2.07
YIF1A-206ENST00000474986 CCDC8Q9H0W5 538 aaPredicted RBP28.01■■■□□ 2.07
YIF1A-206ENST00000474986 MYOZ2Q9NPC6 264 aa28.01■■■□□ 2.07
YIF1A-206ENST00000474986 HIRAP54198 1017 aaPredicted RBP28■■■□□ 2.07
YIF1A-206ENST00000474986 IRX6P78412 446 aaPredicted RBP28■■■□□ 2.07
YIF1A-206ENST00000474986 KIF4BQ2VIQ3 1234 aa28■■■□□ 2.07
YIF1A-206ENST00000474986 TBC1D10BQ4KMP7 808 aaPredicted RBP28■■■□□ 2.07
YIF1A-206ENST00000474986 ADAMTSL1Q8N6G6 1762 aa27.99■■■□□ 2.07
YIF1A-206ENST00000474986 TTC39AQ5SRH9 613 aa27.99■■■□□ 2.07
YIF1A-206ENST00000474986 ZGPATQ8N5A5 531 aaKnown RBP27.99■■■□□ 2.07
YIF1A-206ENST00000474986 GCC1Q96CN9 775 aa27.99■■■□□ 2.07
YIF1A-206ENST00000474986 RWDD1Q9H446 243 aaPredicted RBP27.99■■■□□ 2.07
YIF1A-206ENST00000474986 TLR7Q9NYK1 1049 aaKnown RBP27.99■■■□□ 2.07
YIF1A-206ENST00000474986 PGAP2Q9UHJ9 254 aa27.99■■■□□ 2.07
YIF1A-206ENST00000474986 IFIT2P09913 472 aaKnown RBP27.98■■■□□ 2.07
YIF1A-206ENST00000474986 CLEC11AQ9Y240 323 aa27.98■■■□□ 2.07
YIF1A-206ENST00000474986 MAST3O60307 1309 aa27.97■■■□□ 2.07
YIF1A-206ENST00000474986 EGFRP00533 1210 aa27.97■■■□□ 2.07
YIF1A-206ENST00000474986 MTMR14Q8NCE2 650 aa27.97■■■□□ 2.07
YIF1A-206ENST00000474986 HMG20BQ9P0W2 317 aa27.97■■■□□ 2.07
YIF1A-206ENST00000474986 HDLBPQ00341 1268 aaKnown RBP27.96■■■□□ 2.07
YIF1A-206ENST00000474986 RBM26Q5T8P6 1007 aaKnown RBP27.96■■■□□ 2.07
YIF1A-206ENST00000474986 SPATA5Q8NB90 893 aa27.96■■■□□ 2.07
YIF1A-206ENST00000474986 MRIQ9BWK5 157 aa27.96■■■□□ 2.07
YIF1A-206ENST00000474986 SERPINA10Q9UK55 444 aa27.96■■■□□ 2.07
YIF1A-206ENST00000474986 TTF2Q9UNY4 1162 aaKnown RBP27.96■■■□□ 2.07
YIF1A-206ENST00000474986 F8W031 263 aaPredicted RBP27.95■■■□□ 2.06
YIF1A-206ENST00000474986 MCAMP43121 646 aa27.95■■■□□ 2.06
YIF1A-206ENST00000474986 ZBED3Q96IU2 234 aaPredicted RBP27.94■■■□□ 2.06
YIF1A-206ENST00000474986 SCARF1Q14162 830 aa27.93■■■□□ 2.06
YIF1A-206ENST00000474986 DLGAP5Q15398 846 aa27.93■■■□□ 2.06
YIF1A-206ENST00000474986 GRIK5Q16478 980 aa27.93■■■□□ 2.06
YIF1A-206ENST00000474986 SPTY2D1Q68D10 685 aaPredicted RBP27.93■■■□□ 2.06
YIF1A-206ENST00000474986 MYH13Q9UKX3 1938 aa27.92■■■□□ 2.06
YIF1A-206ENST00000474986 WNT10BO00744 389 aa27.92■■■□□ 2.06
YIF1A-206ENST00000474986 SMARCA5O60264 1052 aaPredicted RBP27.92■■■□□ 2.06
YIF1A-206ENST00000474986 LDHBP07195 334 aaKnown RBP27.92■■■□□ 2.06
YIF1A-206ENST00000474986 CFAP100Q494V2 611 aa27.92■■■□□ 2.06
YIF1A-206ENST00000474986 IGSF3O75054 1194 aa27.91■■■□□ 2.06
YIF1A-206ENST00000474986 PRDX5P30044 214 aa27.91■■■□□ 2.06
YIF1A-206ENST00000474986 MAP1SQ66K74 1059 aaPredicted RBP27.91■■■□□ 2.06
YIF1A-206ENST00000474986 SMC5Q8IY18 1101 aa27.91■■■□□ 2.06
YIF1A-206ENST00000474986 CNTROBQ8N137 903 aa27.91■■■□□ 2.06
YIF1A-206ENST00000474986 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.91■■■□□ 2.06
YIF1A-206ENST00000474986 PITPNM2Q9BZ72 1349 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms