RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, human

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50B-208	ENST00000474272	LATS2	Q9NRM7	1088 aa		7.39	□□□□□ -1.23
TMEM50B-208	ENST00000474272	FOXD3	Q9UJU5	478 aa	Predicted RBP	7.39	□□□□□ -1.23
TMEM50B-208	ENST00000474272	WDR64	B1ANS9	1081 aa		7.38	□□□□□ -1.23
TMEM50B-208	ENST00000474272	DLGAP3	O95886	979 aa		7.38	□□□□□ -1.23
TMEM50B-208	ENST00000474272	IRAK1	P51617	712 aa		7.38	□□□□□ -1.23
TMEM50B-208	ENST00000474272	C19orf57	Q0VDD7	668 aa		7.38	□□□□□ -1.23
TMEM50B-208	ENST00000474272	SGO2	Q562F6	1265 aa		7.38	□□□□□ -1.23
TMEM50B-208	ENST00000474272	ANKRD34A	Q69YU3	496 aa		7.38	□□□□□ -1.23
TMEM50B-208	ENST00000474272	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	7.38	□□□□□ -1.23
TMEM50B-208	ENST00000474272	VN1R5	Q7Z5H4	357 aa		7.38	□□□□□ -1.23
TMEM50B-208	ENST00000474272	WNT8B	Q93098	351 aa		7.38	□□□□□ -1.23
TMEM50B-208	ENST00000474272	MFSD14A	Q96MC6	490 aa		7.38	□□□□□ -1.23
TMEM50B-208	ENST00000474272	TNFRSF21	O75509	655 aa		7.37	□□□□□ -1.23
TMEM50B-208	ENST00000474272	HOXA10	P31260	410 aa	Predicted RBP	7.37	□□□□□ -1.23
TMEM50B-208	ENST00000474272	IKBKE	Q14164	716 aa		7.37	□□□□□ -1.23
TMEM50B-208	ENST00000474272	SHISA5	Q8N114	240 aa		7.37	□□□□□ -1.23
TMEM50B-208	ENST00000474272	TMEM102	Q8N9M5	508 aa	Predicted RBP	7.37	□□□□□ -1.23
TMEM50B-208	ENST00000474272	C12orf50	Q8NA57	414 aa	Predicted RBP	7.37	□□□□□ -1.23
TMEM50B-208	ENST00000474272	ASAP3	Q8TDY4	903 aa		7.37	□□□□□ -1.23
TMEM50B-208	ENST00000474272	USP26	Q9BXU7	913 aa		7.37	□□□□□ -1.23
TMEM50B-208	ENST00000474272	METTL12	A8MUP2	240 aa		7.36	□□□□□ -1.23
TMEM50B-208	ENST00000474272	GAS2	O43903	313 aa	Known RBP	7.36	□□□□□ -1.23
TMEM50B-208	ENST00000474272	PHACTR2	O75167	634 aa		7.36	□□□□□ -1.23
TMEM50B-208	ENST00000474272	DRD2	P14416	443 aa		7.36	□□□□□ -1.23
TMEM50B-208	ENST00000474272	TAL1	P17542	331 aa	Predicted RBP	7.36	□□□□□ -1.23
TMEM50B-208	ENST00000474272	SPINK2	P20155	84 aa		7.36	□□□□□ -1.23
TMEM50B-208	ENST00000474272	MAP4	P27816	1152 aa	Known RBP	7.36	□□□□□ -1.23
TMEM50B-208	ENST00000474272	SSFA2	P28290	1259 aa		7.36	□□□□□ -1.23
TMEM50B-208	ENST00000474272	RXRB	P28702	533 aa		7.36	□□□□□ -1.23
TMEM50B-208	ENST00000474272	GRIK1	P39086	918 aa		7.36	□□□□□ -1.23
TMEM50B-208	ENST00000474272	ARL4D	P49703	201 aa		7.36	□□□□□ -1.23
TMEM50B-208	ENST00000474272	FBXL6	Q8N531	539 aa		7.36	□□□□□ -1.23
TMEM50B-208	ENST00000474272	BSND	Q8WZ55	320 aa		7.36	□□□□□ -1.23
TMEM50B-208	ENST00000474272	PMEPA1	Q969W9	287 aa		7.36	□□□□□ -1.23
TMEM50B-208	ENST00000474272	ANO2	Q9NQ90	1003 aa		7.36	□□□□□ -1.23
TMEM50B-208	ENST00000474272	TMEM88B	A6NKF7	163 aa		7.35	□□□□□ -1.23
TMEM50B-208	ENST00000474272	POLR3D	P05423	398 aa	Predicted RBP	7.35	□□□□□ -1.23
TMEM50B-208	ENST00000474272	GOLGA2P5	Q9HBQ8	144 aa		7.35	□□□□□ -1.23
TMEM50B-208	ENST00000474272	LOC100289279	A0A1B0GTE1	492 aa		7.34	□□□□□ -1.23
TMEM50B-208	ENST00000474272	PEAR1	Q5VY43	1037 aa	Predicted RBP	7.34	□□□□□ -1.23
TMEM50B-208	ENST00000474272	NUTM2G	Q5VZR2	741 aa		7.34	□□□□□ -1.23
TMEM50B-208	ENST00000474272	INTS5	Q6P9B9	1019 aa	Known RBP	7.34	□□□□□ -1.23
TMEM50B-208	ENST00000474272	DTX1	Q86Y01	620 aa		7.34	□□□□□ -1.23
TMEM50B-208	ENST00000474272	CCDC87	Q9NVE4	849 aa		7.34	□□□□□ -1.23
TMEM50B-208	ENST00000474272	TIMELESS	Q9UNS1	1208 aa		7.34	□□□□□ -1.23
TMEM50B-208	ENST00000474272	MEGF11	A6BM72	1044 aa		7.33	□□□□□ -1.24
TMEM50B-208	ENST00000474272	PAX4	O43316	350 aa		7.33	□□□□□ -1.24
TMEM50B-208	ENST00000474272	CCDC82	Q8N4S0	544 aa		7.33	□□□□□ -1.24
TMEM50B-208	ENST00000474272	TMPRSS13	Q9BYE2	586 aa		7.33	□□□□□ -1.24
TMEM50B-208	ENST00000474272	FZD6	O60353	706 aa		7.32	□□□□□ -1.24
TMEM50B-208	ENST00000474272	WNT11	O96014	354 aa		7.32	□□□□□ -1.24
TMEM50B-208	ENST00000474272	ABL1	P00519	1130 aa		7.32	□□□□□ -1.24
TMEM50B-208	ENST00000474272	F13B	P05160	661 aa		7.32	□□□□□ -1.24
TMEM50B-208	ENST00000474272	ESRRA	P11474	423 aa	Predicted RBP	7.32	□□□□□ -1.24
TMEM50B-208	ENST00000474272	EDN3	P14138	238 aa		7.32	□□□□□ -1.24
TMEM50B-208	ENST00000474272	GSTM4	Q03013	218 aa		7.32	□□□□□ -1.24
TMEM50B-208	ENST00000474272	NFKBIB	Q15653	356 aa		7.32	□□□□□ -1.24
TMEM50B-208	ENST00000474272	ALKBH2	Q6NS38	261 aa		7.32	□□□□□ -1.24
TMEM50B-208	ENST00000474272	PHLDB3	Q6NSJ2	640 aa		7.32	□□□□□ -1.24
TMEM50B-208	ENST00000474272	FBLIM1	Q8WUP2	373 aa		7.32	□□□□□ -1.24
TMEM50B-208	ENST00000474272	TIAF1	O95411	115 aa		7.31	□□□□□ -1.24
TMEM50B-208	ENST00000474272	ZNF211	Q13398	564 aa	Predicted RBP	7.31	□□□□□ -1.24
TMEM50B-208	ENST00000474272	CDPF1	Q6NVV7	123 aa		7.31	□□□□□ -1.24
TMEM50B-208	ENST00000474272	SNX29	Q8TEQ0	813 aa		7.31	□□□□□ -1.24
TMEM50B-208	ENST00000474272	KRTAP9-9	Q9BYP9	154 aa		7.31	□□□□□ -1.24
TMEM50B-208	ENST00000474272	KRTAP9-4	Q9BYQ2	154 aa		7.31	□□□□□ -1.24
TMEM50B-208	ENST00000474272	HIF3A	Q9Y2N7	669 aa		7.31	□□□□□ -1.24
TMEM50B-208	ENST00000474272	NPR3	P17342	541 aa		7.3	□□□□□ -1.24
TMEM50B-208	ENST00000474272	SMG8	Q8ND04	991 aa	Known RBP	7.3	□□□□□ -1.24
TMEM50B-208	ENST00000474272	BHLHE41	Q9C0J9	482 aa	Predicted RBP	7.3	□□□□□ -1.24
TMEM50B-208	ENST00000474272	CYP4F12	Q9HCS2	524 aa		7.3	□□□□□ -1.24
TMEM50B-208	ENST00000474272	ATG3	Q9NT62	314 aa		7.3	□□□□□ -1.24
TMEM50B-208	ENST00000474272	PIM2	Q9P1W9	311 aa		7.3	□□□□□ -1.24
TMEM50B-208	ENST00000474272	FAM95C	A0A1B0GW59	222 aa		7.29	□□□□□ -1.24
TMEM50B-208	ENST00000474272	FAM13A	O94988	1023 aa		7.29	□□□□□ -1.24
TMEM50B-208	ENST00000474272	ADM	P35318	185 aa		7.29	□□□□□ -1.24
TMEM50B-208	ENST00000474272	USP11	P51784	963 aa		7.29	□□□□□ -1.24
TMEM50B-208	ENST00000474272	SPRED3	Q2MJR0	410 aa		7.29	□□□□□ -1.24
TMEM50B-208	ENST00000474272	ZFYVE28	Q9HCC9	887 aa		7.29	□□□□□ -1.24
TMEM50B-208	ENST00000474272	AMOTL2	Q9Y2J4	779 aa		7.29	□□□□□ -1.24
TMEM50B-208	ENST00000474272	CTSB	P07858	339 aa		7.28	□□□□□ -1.24
TMEM50B-208	ENST00000474272	FKBP4	Q02790	459 aa	Known RBP eCLIP	7.28	□□□□□ -1.24
TMEM50B-208	ENST00000474272	EXOSC6	Q5RKV6	272 aa	Known RBP	7.28	□□□□□ -1.24
TMEM50B-208	ENST00000474272	OSBPL1A	Q9BXW6	950 aa		7.28	□□□□□ -1.24
TMEM50B-208	ENST00000474272	SUGCT	Q9HAC7	445 aa		7.28	□□□□□ -1.24
TMEM50B-208	ENST00000474272	LEMD3	Q9Y2U8	911 aa		7.28	□□□□□ -1.24
TMEM50B-208	ENST00000474272	ZNF423	Q2M1K9	1284 aa		7.27	□□□□□ -1.25
TMEM50B-208	ENST00000474272	ABI1	Q8IZP0	508 aa		7.27	□□□□□ -1.25
TMEM50B-208	ENST00000474272	C2CD4A	Q8NCU7	369 aa	Predicted RBP	7.27	□□□□□ -1.25
TMEM50B-208	ENST00000474272	FMNL2	Q96PY5	1086 aa		7.27	□□□□□ -1.25
TMEM50B-208	ENST00000474272	C1orf115	Q9H7X2	142 aa		7.27	□□□□□ -1.25
TMEM50B-208	ENST00000474272	RNF114	Q9Y508	228 aa		7.27	□□□□□ -1.25
TMEM50B-208	ENST00000474272	TXK	P42681	527 aa		7.26	□□□□□ -1.25
TMEM50B-208	ENST00000474272	USP5	P45974	858 aa		7.26	□□□□□ -1.25
TMEM50B-208	ENST00000474272	GRIA4	P48058	902 aa		7.26	□□□□□ -1.25
TMEM50B-208	ENST00000474272	SOX4	Q06945	474 aa	Predicted RBP	7.26	□□□□□ -1.25
TMEM50B-208	ENST00000474272	EHHADH	Q08426	723 aa		7.26	□□□□□ -1.25
TMEM50B-208	ENST00000474272	USPL1	Q5W0Q7	1092 aa		7.26	□□□□□ -1.25
TMEM50B-208	ENST00000474272	PAOX	Q6QHF9	649 aa		7.26	□□□□□ -1.25
TMEM50B-208	ENST00000474272	GJD3	Q8N144	294 aa		7.26	□□□□□ -1.25

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