RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 NDUFB9Q9Y6M9 179 aa12.74□□□□□ -0.37
CASC3-204ENST00000474190 SCN9AQ15858 1988 aa12.74□□□□□ -0.37
CASC3-204ENST00000474190 ARAP2Q8WZ64 1704 aa12.74□□□□□ -0.37
CASC3-204ENST00000474190 PSMD14O00487 310 aa12.73□□□□□ -0.37
CASC3-204ENST00000474190 RAD17O75943 681 aa12.73□□□□□ -0.37
CASC3-204ENST00000474190 VIL1P09327 827 aaKnown RBP12.73□□□□□ -0.37
CASC3-204ENST00000474190 ATP5JP18859 108 aa12.73□□□□□ -0.37
CASC3-204ENST00000474190 HTRA3P83110 453 aa12.73□□□□□ -0.37
CASC3-204ENST00000474190 ZNF804AQ7Z570 1209 aa12.73□□□□□ -0.37
CASC3-204ENST00000474190 JAG2Q9Y219 1238 aa12.73□□□□□ -0.37
CASC3-204ENST00000474190 GTF3C3Q9Y5Q9 886 aa12.73□□□□□ -0.37
CASC3-204ENST00000474190 ZNF646O15015 1829 aaPredicted RBP12.73□□□□□ -0.37
CASC3-204ENST00000474190 SBF1O95248 1867 aa12.72□□□□□ -0.37
CASC3-204ENST00000474190 PDS5AQ29RF7 1337 aaKnown RBP12.72□□□□□ -0.37
CASC3-204ENST00000474190 SHTN1A0MZ66 631 aa12.72□□□□□ -0.37
CASC3-204ENST00000474190 POTECB2RU33 542 aa12.72□□□□□ -0.37
CASC3-204ENST00000474190 PDE1AP54750 535 aa12.72□□□□□ -0.37
CASC3-204ENST00000474190 NIM1KQ8IY84 436 aa12.72□□□□□ -0.37
CASC3-204ENST00000474190 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.72□□□□□ -0.37
CASC3-204ENST00000474190 EDC3Q96F86 508 aaKnown RBP12.72□□□□□ -0.37
CASC3-204ENST00000474190 OSBPL3Q9H4L5 887 aa12.72□□□□□ -0.37
CASC3-204ENST00000474190 ANTXR1Q9H6X2 564 aa12.72□□□□□ -0.37
CASC3-204ENST00000474190 CYP2E1P05181 493 aaPredicted RBP12.71□□□□□ -0.37
CASC3-204ENST00000474190 IFIT2P09913 472 aaKnown RBP12.71□□□□□ -0.37
CASC3-204ENST00000474190 ZAP70P43403 619 aa12.71□□□□□ -0.37
CASC3-204ENST00000474190 GTF2IP78347 998 aa12.71□□□□□ -0.37
CASC3-204ENST00000474190 CAVIN4Q5BKX8 364 aa12.71□□□□□ -0.37
CASC3-204ENST00000474190 STRIP1Q5VSL9 837 aa12.71□□□□□ -0.37
CASC3-204ENST00000474190 PIH1D3Q9NQM4 214 aaKnown RBP12.71□□□□□ -0.37
CASC3-204ENST00000474190 SNRKQ9NRH2 765 aa12.71□□□□□ -0.37
CASC3-204ENST00000474190 ECHDC1Q9NTX5 307 aa12.71□□□□□ -0.37
CASC3-204ENST00000474190 ZBTB12Q9Y330 459 aaPredicted RBP12.71□□□□□ -0.37
CASC3-204ENST00000474190 SALL1Q9NSC2 1324 aa12.7□□□□□ -0.38
CASC3-204ENST00000474190 USP17L3A6NCW0 530 aa12.7□□□□□ -0.38
CASC3-204ENST00000474190 USP17L4A6NCW7 530 aa12.7□□□□□ -0.38
CASC3-204ENST00000474190 SEMA3EO15041 775 aa12.7□□□□□ -0.38
CASC3-204ENST00000474190 TOMM70O94826 608 aa12.7□□□□□ -0.38
CASC3-204ENST00000474190 DDNO94850 711 aaPredicted RBP12.7□□□□□ -0.38
CASC3-204ENST00000474190 CHGBP05060 677 aa12.7□□□□□ -0.38
CASC3-204ENST00000474190 MX1P20591 662 aa12.7□□□□□ -0.38
CASC3-204ENST00000474190 SCNN1DP51172 638 aa12.7□□□□□ -0.38
CASC3-204ENST00000474190 TBC1D9Q6ZT07 1266 aa12.7□□□□□ -0.38
CASC3-204ENST00000474190 USP17L1Q7RTZ2 530 aa12.7□□□□□ -0.38
CASC3-204ENST00000474190 TNS4Q8IZW8 715 aa12.7□□□□□ -0.38
CASC3-204ENST00000474190 SPATA5Q8NB90 893 aa12.7□□□□□ -0.38
CASC3-204ENST00000474190 JDP2Q8WYK2 163 aa12.7□□□□□ -0.38
CASC3-204ENST00000474190 HAUS7Q99871 368 aa12.7□□□□□ -0.38
CASC3-204ENST00000474190 AOX1Q06278 1338 aa12.69□□□□□ -0.38
CASC3-204ENST00000474190 TTC41PQ6P2S7 1318 aa12.69□□□□□ -0.38
CASC3-204ENST00000474190 ZC3H4Q9UPT8 1303 aaKnown RBP12.69□□□□□ -0.38
CASC3-204ENST00000474190 GSPT1P15170 499 aaKnown RBP12.69□□□□□ -0.38
CASC3-204ENST00000474190 FKBP1AP62942 108 aaKnown RBP12.69□□□□□ -0.38
CASC3-204ENST00000474190 TTLL5Q6EMB2 1281 aa12.69□□□□□ -0.38
CASC3-204ENST00000474190 CIAPIN1Q6FI81 312 aa12.69□□□□□ -0.38
CASC3-204ENST00000474190 RSBN1LQ6PCB5 846 aaPredicted RBP12.69□□□□□ -0.38
CASC3-204ENST00000474190 JMYQ8N9B5 988 aa12.69□□□□□ -0.38
CASC3-204ENST00000474190 BCL11AQ9H165 835 aa12.69□□□□□ -0.38
CASC3-204ENST00000474190 BOLA2Q9H3K6 86 aa12.69□□□□□ -0.38
CASC3-204ENST00000474190 EGFRP00533 1210 aa12.68□□□□□ -0.38
CASC3-204ENST00000474190 UQCRFS1P1P0C7P4 283 aa12.68□□□□□ -0.38
CASC3-204ENST00000474190 PRDX5P30044 214 aa12.68□□□□□ -0.38
CASC3-204ENST00000474190 CCDC158Q5M9N0 1113 aa12.68□□□□□ -0.38
CASC3-204ENST00000474190 TTC39AQ5SRH9 613 aa12.68□□□□□ -0.38
CASC3-204ENST00000474190 KLRG1Q96E93 195 aa12.68□□□□□ -0.38
CASC3-204ENST00000474190 L3MBTL3Q96JM7 780 aaPredicted RBP12.68□□□□□ -0.38
CASC3-204ENST00000474190 NMRK2Q9NPI5 230 aa12.68□□□□□ -0.38
CASC3-204ENST00000474190 DENND2AQ9ULE3 1009 aa12.68□□□□□ -0.38
CASC3-204ENST00000474190 PCDHAC2Q9Y5I4 1007 aa12.68□□□□□ -0.38
CASC3-204ENST00000474190 AKAP11Q9UKA4 1901 aa12.67□□□□□ -0.38
CASC3-204ENST00000474190 GLTPD2A6NH11 291 aa12.67□□□□□ -0.38
CASC3-204ENST00000474190 GMPSP49915 693 aaPredicted RBP12.67□□□□□ -0.38
CASC3-204ENST00000474190 ZNF280AP59817 542 aaPredicted RBP12.67□□□□□ -0.38
CASC3-204ENST00000474190 CHAF1AQ13111 956 aaPredicted RBP12.67□□□□□ -0.38
CASC3-204ENST00000474190 SLFNL1Q499Z3 407 aa12.67□□□□□ -0.38
CASC3-204ENST00000474190 MFSD14BQ5SR56 506 aa12.67□□□□□ -0.38
CASC3-204ENST00000474190 VPS37DQ86XT2 251 aa12.67□□□□□ -0.38
CASC3-204ENST00000474190 GPC2Q8N158 579 aa12.67□□□□□ -0.38
CASC3-204ENST00000474190 ZBED3Q96IU2 234 aaPredicted RBP12.67□□□□□ -0.38
CASC3-204ENST00000474190 GNL3LQ9NVN8 582 aaKnown RBP12.67□□□□□ -0.38
CASC3-204ENST00000474190 GORABQ5T7V8 394 aa12.66□□□□□ -0.38
CASC3-204ENST00000474190 AGBL3Q8NEM8 1001 aa12.66□□□□□ -0.38
CASC3-204ENST00000474190 DPF2Q92785 391 aa12.66□□□□□ -0.38
CASC3-204ENST00000474190 DICER1Q9UPY3 1922 aaKnown RBP12.65□□□□□ -0.38
CASC3-204ENST00000474190 TCRBV5S4A2TA0A5A2 114 aa12.65□□□□□ -0.38
CASC3-204ENST00000474190 GLRX3O76003 335 aaKnown RBP12.65□□□□□ -0.38
CASC3-204ENST00000474190 MAP4K4O95819 1239 aaPredicted RBP12.65□□□□□ -0.38
CASC3-204ENST00000474190 EPS15P42566 896 aa12.65□□□□□ -0.38
CASC3-204ENST00000474190 HIRAP54198 1017 aaPredicted RBP12.65□□□□□ -0.38
CASC3-204ENST00000474190 EIF6P56537 245 aaKnown RBP12.65□□□□□ -0.38
CASC3-204ENST00000474190 TNIP1Q15025 636 aa12.65□□□□□ -0.38
CASC3-204ENST00000474190 ADGRA1Q86SQ6 560 aa12.65□□□□□ -0.38
CASC3-204ENST00000474190 WDR66Q8TBY9 1149 aa12.65□□□□□ -0.38
CASC3-204ENST00000474190 NSUN4Q96CB9 384 aaKnown RBP12.65□□□□□ -0.38
CASC3-204ENST00000474190 GPRC5DQ9NZD1 345 aa12.65□□□□□ -0.38
CASC3-204ENST00000474190 TIAM2Q8IVF5 1701 aa12.65□□□□□ -0.38
CASC3-204ENST00000474190 GOLIM4O00461 696 aa12.64□□□□□ -0.39
CASC3-204ENST00000474190 RPS12P25398 132 aaKnown RBP12.64□□□□□ -0.39
CASC3-204ENST00000474190 TTC22Q5TAA0 569 aa12.64□□□□□ -0.39
CASC3-204ENST00000474190 KIAA0825Q8IV33 1275 aa12.64□□□□□ -0.39
CASC3-204ENST00000474190 PAG1Q9NWQ8 432 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms