RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 TNS4Q8IZW8 715 aa24.95■■□□□ 1.58
TMEM54-204ENST00000474144 VGLL2Q8N8G2 317 aa24.95■■□□□ 1.58
TMEM54-204ENST00000474144 ZIC5Q96T25 663 aa24.95■■□□□ 1.58
TMEM54-204ENST00000474144 UBTFL1P0CB47 393 aaPredicted RBP24.94■■□□□ 1.58
TMEM54-204ENST00000474144 HIBADHP31937 336 aaKnown RBP24.94■■□□□ 1.58
TMEM54-204ENST00000474144 LBX1P52954 281 aa24.94■■□□□ 1.58
TMEM54-204ENST00000474144 HNRNPUQ00839 825 aaKnown RBP eCLIP24.94■■□□□ 1.58
TMEM54-204ENST00000474144 RGMBQ6NW40 437 aa24.94■■□□□ 1.58
TMEM54-204ENST00000474144 TDRD7Q8NHU6 1098 aaKnown RBP24.94■■□□□ 1.58
TMEM54-204ENST00000474144 ZBED3Q96IU2 234 aaPredicted RBP24.94■■□□□ 1.58
TMEM54-204ENST00000474144 HSPA8P11142 646 aaKnown RBP24.93■■□□□ 1.58
TMEM54-204ENST00000474144 MMP14P50281 582 aa24.93■■□□□ 1.58
TMEM54-204ENST00000474144 FAM155AB1AL88 458 aaPredicted RBP24.92■■□□□ 1.58
TMEM54-204ENST00000474144 BCAR3O75815 825 aa24.92■■□□□ 1.58
TMEM54-204ENST00000474144 PDE8BO95263 885 aa24.92■■□□□ 1.58
TMEM54-204ENST00000474144 PTPN12Q05209 780 aaKnown RBP24.92■■□□□ 1.58
TMEM54-204ENST00000474144 TNNQ9UQP3 1299 aa24.92■■□□□ 1.58
TMEM54-204ENST00000474144 FAM205AQ6ZU69 1335 aa24.91■■□□□ 1.58
TMEM54-204ENST00000474144 KIF16BQ96L93 1317 aa24.91■■□□□ 1.58
TMEM54-204ENST00000474144 FKBP1AP62942 108 aaKnown RBP24.91■■□□□ 1.58
TMEM54-204ENST00000474144 MOB2Q70IA6 237 aa24.91■■□□□ 1.58
TMEM54-204ENST00000474144 ARHGAP45Q92619 1136 aa24.91■■□□□ 1.58
TMEM54-204ENST00000474144 MEIS3Q99687 375 aa24.91■■□□□ 1.58
TMEM54-204ENST00000474144 PRDM10Q9NQV6 1147 aa24.91■■□□□ 1.58
TMEM54-204ENST00000474144 IQSEC3Q9UPP2 1182 aaPredicted RBP24.91■■□□□ 1.58
TMEM54-204ENST00000474144 LRRFIP2Q9Y608 721 aaKnown RBP24.91■■□□□ 1.58
TMEM54-204ENST00000474144 ZNF157P51786 506 aaPredicted RBP24.9■■□□□ 1.58
TMEM54-204ENST00000474144 DLGAP5Q15398 846 aa24.9■■□□□ 1.58
TMEM54-204ENST00000474144 FBXO33Q7Z6M2 555 aa24.9■■□□□ 1.58
TMEM54-204ENST00000474144 TSKSQ9UJT2 592 aa24.9■■□□□ 1.58
TMEM54-204ENST00000474144 AOX1Q06278 1338 aa24.89■■□□□ 1.58
TMEM54-204ENST00000474144 EYA2O00167 538 aa24.89■■□□□ 1.58
TMEM54-204ENST00000474144 CFAP100Q494V2 611 aa24.89■■□□□ 1.58
TMEM54-204ENST00000474144 INTS3Q68E01 1043 aaKnown RBP24.89■■□□□ 1.58
TMEM54-204ENST00000474144 BEGAINQ9BUH8 593 aa24.89■■□□□ 1.58
TMEM54-204ENST00000474144 PAPPA2Q9BXP8 1791 aa24.88■■□□□ 1.57
TMEM54-204ENST00000474144 FGFR2P21802 821 aa24.88■■□□□ 1.57
TMEM54-204ENST00000474144 NOGQ13253 232 aa24.88■■□□□ 1.57
TMEM54-204ENST00000474144 MFSD14BQ5SR56 506 aa24.88■■□□□ 1.57
TMEM54-204ENST00000474144 ATG9AQ7Z3C6 839 aa24.88■■□□□ 1.57
TMEM54-204ENST00000474144 MTMR14Q8NCE2 650 aa24.88■■□□□ 1.57
TMEM54-204ENST00000474144 PRMT6Q96LA8 375 aaPredicted RBP24.88■■□□□ 1.57
TMEM54-204ENST00000474144 BCAMP50895 628 aa24.87■■□□□ 1.57
TMEM54-204ENST00000474144 VPS37DQ86XT2 251 aa24.87■■□□□ 1.57
TMEM54-204ENST00000474144 FRAT1Q92837 279 aaPredicted RBP24.87■■□□□ 1.57
TMEM54-204ENST00000474144 SIL1Q9H173 461 aa24.87■■□□□ 1.57
TMEM54-204ENST00000474144 ECM29Q5VYK3 1845 aa24.86■■□□□ 1.57
TMEM54-204ENST00000474144 TRIM27P14373 513 aa24.86■■□□□ 1.57
TMEM54-204ENST00000474144 PUM3Q15397 648 aaKnown RBP24.86■■□□□ 1.57
TMEM54-204ENST00000474144 GRIK5Q16478 980 aa24.86■■□□□ 1.57
TMEM54-204ENST00000474144 CAVIN4Q5BKX8 364 aa24.86■■□□□ 1.57
TMEM54-204ENST00000474144 APOBEC3FQ8IUX4 373 aaKnown RBP24.86■■□□□ 1.57
TMEM54-204ENST00000474144 CCDC102AQ96A19 550 aa24.86■■□□□ 1.57
TMEM54-204ENST00000474144 ARAP2Q8WZ64 1704 aa24.86■■□□□ 1.57
TMEM54-204ENST00000474144 CLRN2A0PK11 232 aa24.85■■□□□ 1.57
TMEM54-204ENST00000474144 SPDYE2BA6NHP3 402 aa24.85■■□□□ 1.57
TMEM54-204ENST00000474144 UBE2Q2LH0YL09 131 aa24.85■■□□□ 1.57
TMEM54-204ENST00000474144 SLC10A3P09131 477 aa24.85■■□□□ 1.57
TMEM54-204ENST00000474144 SPDYE6P0CI01 402 aa24.85■■□□□ 1.57
TMEM54-204ENST00000474144 RBM5P52756 815 aaKnown RBP eCLIP24.85■■□□□ 1.57
TMEM54-204ENST00000474144 FKBP1BP68106 108 aa24.85■■□□□ 1.57
TMEM54-204ENST00000474144 CHAF1AQ13111 956 aaPredicted RBP24.85■■□□□ 1.57
TMEM54-204ENST00000474144 TTF2Q9UNY4 1162 aaKnown RBP24.85■■□□□ 1.57
TMEM54-204ENST00000474144 PA2G4Q9UQ80 394 aaKnown RBP24.85■■□□□ 1.57
TMEM54-204ENST00000474144 KIF23Q02241 960 aaPredicted RBP24.84■■□□□ 1.57
TMEM54-204ENST00000474144 ATF7IPQ6VMQ6 1270 aa24.84■■□□□ 1.57
TMEM54-204ENST00000474144 CLUAP1Q96AJ1 413 aa24.84■■□□□ 1.57
TMEM54-204ENST00000474144 IPO8O15397 1037 aaKnown RBP24.83■■□□□ 1.57
TMEM54-204ENST00000474144 IFIT1P09914 478 aaKnown RBP24.83■■□□□ 1.57
TMEM54-204ENST00000474144 PRKG1Q13976 671 aa24.83■■□□□ 1.57
TMEM54-204ENST00000474144 TTLL12Q14166 644 aaPredicted RBP24.83■■□□□ 1.57
TMEM54-204ENST00000474144 RASAL3Q86YV0 1011 aa24.83■■□□□ 1.57
TMEM54-204ENST00000474144 DEFB129Q9H1M3 183 aa24.83■■□□□ 1.57
TMEM54-204ENST00000474144 FRAT2O75474 233 aaPredicted RBP24.82■■□□□ 1.56
TMEM54-204ENST00000474144 CAPN15O75808 1086 aa24.82■■□□□ 1.56
TMEM54-204ENST00000474144 FZD1Q9UP38 647 aa24.82■■□□□ 1.56
TMEM54-204ENST00000474144 CIAO1O76071 339 aa24.81■■□□□ 1.56
TMEM54-204ENST00000474144 LPIN2Q92539 896 aa24.81■■□□□ 1.56
TMEM54-204ENST00000474144 VEZTQ9HBM0 779 aa24.81■■□□□ 1.56
TMEM54-204ENST00000474144 HDAC5Q9UQL6 1122 aa24.81■■□□□ 1.56
TMEM54-204ENST00000474144 MYO1BO43795 1136 aa24.8■■□□□ 1.56
TMEM54-204ENST00000474144 GNAI3P08754 354 aa24.8■■□□□ 1.56
TMEM54-204ENST00000474144 SLC5A1P13866 664 aa24.8■■□□□ 1.56
TMEM54-204ENST00000474144 NF2P35240 595 aa24.8■■□□□ 1.56
TMEM54-204ENST00000474144 FBXO3Q9UK99 471 aa24.8■■□□□ 1.56
TMEM54-204ENST00000474144 COL1A1P02452 1464 aaPredicted RBP24.79■■□□□ 1.56
TMEM54-204ENST00000474144 TDRD3Q9H7E2 651 aaKnown RBP24.79■■□□□ 1.56
TMEM54-204ENST00000474144 COPRSQ9NQ92 184 aa24.79■■□□□ 1.56
TMEM54-204ENST00000474144 SERPINA10Q9UK55 444 aa24.79■■□□□ 1.56
TMEM54-204ENST00000474144 CA12O43570 354 aa24.78■■□□□ 1.56
TMEM54-204ENST00000474144 CRKP46108 304 aa24.78■■□□□ 1.56
TMEM54-204ENST00000474144 CSRNP1Q96S65 589 aa24.78■■□□□ 1.56
TMEM54-204ENST00000474144 CEP126Q9P2H0 1117 aa24.78■■□□□ 1.56
TMEM54-204ENST00000474144 SSC5DA1L4H1 1573 aa24.78■■□□□ 1.56
TMEM54-204ENST00000474144 IL15P40933 162 aaPredicted RBP24.77■■□□□ 1.56
TMEM54-204ENST00000474144 ATP2B3Q16720 1220 aa24.77■■□□□ 1.56
TMEM54-204ENST00000474144 ZKSCAN2Q63HK3 967 aa24.77■■□□□ 1.56
TMEM54-204ENST00000474144 DZIP1LQ8IYY4 767 aaKnown RBP24.77■■□□□ 1.56
TMEM54-204ENST00000474144 TMEM57Q8N5G2 664 aa24.77■■□□□ 1.56
TMEM54-204ENST00000474144 TBC1D22AQ8WUA7 517 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms