RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 CLRN2A0PK11 232 aa25.83■■□□□ 1.73
APP-215ENST00000474136 GJA5P36382 358 aa25.83■■□□□ 1.73
APP-215ENST00000474136 KCNJ4P48050 445 aa25.83■■□□□ 1.73
APP-215ENST00000474136 CHRNDQ07001 517 aa25.83■■□□□ 1.73
APP-215ENST00000474136 MPHOSPH8Q99549 860 aa25.83■■□□□ 1.73
APP-215ENST00000474136 PTPN22Q9Y2R2 807 aa25.83■■□□□ 1.73
APP-215ENST00000474136 AOX1Q06278 1338 aa25.82■■□□□ 1.72
APP-215ENST00000474136 MYH3P11055 1940 aa25.82■■□□□ 1.72
APP-215ENST00000474136 F8W031 263 aaPredicted RBP25.82■■□□□ 1.72
APP-215ENST00000474136 PPP1R12BO60237 982 aaPredicted RBP25.82■■□□□ 1.72
APP-215ENST00000474136 CAP1Q01518 475 aa25.82■■□□□ 1.72
APP-215ENST00000474136 CRHR2Q13324 411 aa25.82■■□□□ 1.72
APP-215ENST00000474136 NBPF12Q5TAG4 269 aaPredicted RBP25.81■■□□□ 1.72
APP-215ENST00000474136 MTMR14Q8NCE2 650 aa25.81■■□□□ 1.72
APP-215ENST00000474136 ERO1AQ96HE7 468 aa25.81■■□□□ 1.72
APP-215ENST00000474136 PLA2G12BQ9BX93 195 aa25.81■■□□□ 1.72
APP-215ENST00000474136 IRS2Q9Y4H2 1338 aa25.81■■□□□ 1.72
APP-215ENST00000474136 KIAA0100Q14667 2235 aaKnown RBP25.8■■□□□ 1.72
APP-215ENST00000474136 EN2P19622 333 aaPredicted RBP25.8■■□□□ 1.72
APP-215ENST00000474136 CASP7P55210 303 aa25.8■■□□□ 1.72
APP-215ENST00000474136 CFAP100Q494V2 611 aa25.8■■□□□ 1.72
APP-215ENST00000474136 HELBQ8NG08 1087 aaPredicted RBP25.8■■□□□ 1.72
APP-215ENST00000474136 TSR2Q969E8 191 aaKnown RBP25.8■■□□□ 1.72
APP-215ENST00000474136 CHMP4AQ9BY43 222 aa25.8■■□□□ 1.72
APP-215ENST00000474136 PPP2R3BQ9Y5P8 575 aa25.8■■□□□ 1.72
APP-215ENST00000474136 TAF5LO75529 589 aa25.79■■□□□ 1.72
APP-215ENST00000474136 CSF1RP07333 972 aa25.79■■□□□ 1.72
APP-215ENST00000474136 GCKRQ14397 625 aa25.79■■□□□ 1.72
APP-215ENST00000474136 PRMT6Q96LA8 375 aaPredicted RBP25.79■■□□□ 1.72
APP-215ENST00000474136 PTPN18Q99952 460 aa25.79■■□□□ 1.72
APP-215ENST00000474136 STK31Q9BXU1 1019 aa25.79■■□□□ 1.72
APP-215ENST00000474136 VEZTQ9HBM0 779 aa25.79■■□□□ 1.72
APP-215ENST00000474136 JAG2Q9Y219 1238 aa25.79■■□□□ 1.72
APP-215ENST00000474136 BRCA2P51587 3418 aa25.78■■□□□ 1.72
APP-215ENST00000474136 SPDYE2BA6NHP3 402 aa25.78■■□□□ 1.72
APP-215ENST00000474136 USP2O75604 605 aaPredicted RBP25.78■■□□□ 1.72
APP-215ENST00000474136 SPDYE6P0CI01 402 aa25.78■■□□□ 1.72
APP-215ENST00000474136 SUPT20HL1Q3ZLR7 823 aa25.78■■□□□ 1.72
APP-215ENST00000474136 CCDC184Q52MB2 194 aa25.78■■□□□ 1.72
APP-215ENST00000474136 EFCC1Q9HA90 598 aa25.78■■□□□ 1.72
APP-215ENST00000474136 ARMC5Q96C12 935 aa25.77■■□□□ 1.72
APP-215ENST00000474136 MYO1BO43795 1136 aa25.75■■□□□ 1.71
APP-215ENST00000474136 SLC4A2P04920 1241 aa25.75■■□□□ 1.71
APP-215ENST00000474136 IREB2P48200 963 aaKnown RBP25.75■■□□□ 1.71
APP-215ENST00000474136 SP3Q02447 781 aa25.75■■□□□ 1.71
APP-215ENST00000474136 OTUD7BQ6GQQ9 843 aa25.75■■□□□ 1.71
APP-215ENST00000474136 UNCXA6NJT0 531 aa25.74■■□□□ 1.71
APP-215ENST00000474136 RASA3Q14644 834 aa25.74■■□□□ 1.71
APP-215ENST00000474136 C15orf52Q6ZUT6 534 aaKnown RBP25.74■■□□□ 1.71
APP-215ENST00000474136 ANKRD18BA2A2Z9 1011 aa25.73■■□□□ 1.71
APP-215ENST00000474136 TESPA1A2RU30 521 aaPredicted RBP25.73■■□□□ 1.71
APP-215ENST00000474136 IL1R1P14778 569 aa25.73■■□□□ 1.71
APP-215ENST00000474136 ANKRD13AQ8IZ07 590 aa25.73■■□□□ 1.71
APP-215ENST00000474136 ELP3Q9H9T3 547 aa25.73■■□□□ 1.71
APP-215ENST00000474136 FXR1P51114 621 aaKnown RBP eCLIP25.72■■□□□ 1.71
APP-215ENST00000474136 RBM5P52756 815 aaKnown RBP eCLIP25.72■■□□□ 1.71
APP-215ENST00000474136 TWISTNBQ3B726 338 aaPredicted RBP25.71■■□□□ 1.71
APP-215ENST00000474136 ZNF804AQ7Z570 1209 aa25.71■■□□□ 1.71
APP-215ENST00000474136 OPTNQ96CV9 577 aa25.71■■□□□ 1.71
APP-215ENST00000474136 FKBP1AP62942 108 aaKnown RBP25.7■■□□□ 1.71
APP-215ENST00000474136 FLIIQ13045 1269 aa25.7■■□□□ 1.71
APP-215ENST00000474136 CDAN1Q8IWY9 1227 aa25.7■■□□□ 1.71
APP-215ENST00000474136 CNKSR2Q8WXI2 1034 aa25.7■■□□□ 1.71
APP-215ENST00000474136 ZNF333Q96JL9 665 aa25.7■■□□□ 1.71
APP-215ENST00000474136 MS4A4AQ96JQ5 239 aa25.7■■□□□ 1.71
APP-215ENST00000474136 MYH16Q9H6N6 1097 aa25.7■■□□□ 1.71
APP-215ENST00000474136 DNAAF4Q8WXU2 420 aa25.69■■□□□ 1.7
APP-215ENST00000474136 CHMP3Q9Y3E7 222 aa25.69■■□□□ 1.7
APP-215ENST00000474136 LAMB1P07942 1786 aa25.69■■□□□ 1.7
APP-215ENST00000474136 RBBP6Q7Z6E9 1792 aaKnown RBP25.69■■□□□ 1.7
APP-215ENST00000474136 FOXO4P98177 505 aa25.68■■□□□ 1.7
APP-215ENST00000474136 FAM9BQ8IZU0 186 aa25.68■■□□□ 1.7
APP-215ENST00000474136 LINS1Q8NG48 757 aa25.68■■□□□ 1.7
APP-215ENST00000474136 BRI3BPQ8WY22 251 aa25.68■■□□□ 1.7
APP-215ENST00000474136 TMEM106CQ9BVX2 250 aa25.68■■□□□ 1.7
APP-215ENST00000474136 PTCH2Q9Y6C5 1203 aa25.68■■□□□ 1.7
APP-215ENST00000474136 ECM29Q5VYK3 1845 aa25.67■■□□□ 1.7
APP-215ENST00000474136 PLIN1O60240 522 aa25.67■■□□□ 1.7
APP-215ENST00000474136 IFIT5Q13325 482 aaKnown RBP25.67■■□□□ 1.7
APP-215ENST00000474136 FKBP5Q13451 457 aaPredicted RBP25.67■■□□□ 1.7
APP-215ENST00000474136 ZNF70Q9UC06 446 aaPredicted RBP25.67■■□□□ 1.7
APP-215ENST00000474136 SPDYE2Q495Y8 402 aa25.66■■□□□ 1.7
APP-215ENST00000474136 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.66■■□□□ 1.7
APP-215ENST00000474136 ZNF594Q96JF6 807 aaPredicted RBP25.66■■□□□ 1.7
APP-215ENST00000474136 TDRD3Q9H7E2 651 aaKnown RBP25.66■■□□□ 1.7
APP-215ENST00000474136 COLQQ9Y215 455 aaPredicted RBP25.66■■□□□ 1.7
APP-215ENST00000474136 MYCP01106 439 aaPredicted RBP25.65■■□□□ 1.7
APP-215ENST00000474136 TAF1CQ15572 869 aaPredicted RBP25.65■■□□□ 1.7
APP-215ENST00000474136 TEPSINQ96N21 525 aa25.65■■□□□ 1.7
APP-215ENST00000474136 CCL15-CCL14A0A0B4J2E2 113 aa25.64■■□□□ 1.7
APP-215ENST00000474136 CCL15Q16663 113 aa25.64■■□□□ 1.7
APP-215ENST00000474136 SLC9C1Q4G0N8 1177 aa25.64■■□□□ 1.7
APP-215ENST00000474136 TNFAIP1Q13829 316 aa25.63■■□□□ 1.69
APP-215ENST00000474136 EPHA10Q5JZY3 1008 aa25.63■■□□□ 1.69
APP-215ENST00000474136 FAM43AQ8N2R8 423 aa25.63■■□□□ 1.69
APP-215ENST00000474136 TTF2Q9UNY4 1162 aaKnown RBP25.63■■□□□ 1.69
APP-215ENST00000474136 OTOFQ9HC10 1997 aa25.63■■□□□ 1.69
APP-215ENST00000474136 FAM205AQ6ZU69 1335 aa25.63■■□□□ 1.69
APP-215ENST00000474136 TCP10L2B9ZVM9 353 aa25.63■■□□□ 1.69
APP-215ENST00000474136 VGLL4Q14135 290 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms