RNA–Protein interactions for RNA: ENST00000474100.1

PSMB4-203, Transcript of proteasome subunit beta 4, humanhuman

TSL 5

Gene PSMB4, Length 755 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-203ENST00000474100 KDM3BQ7LBC6 1761 aa9.35□□□□□ -0.91
PSMB4-203ENST00000474100 USP17L3A6NCW0 530 aa9.34□□□□□ -0.91
PSMB4-203ENST00000474100 USP17L4A6NCW7 530 aa9.34□□□□□ -0.91
PSMB4-203ENST00000474100 ATP5J2-PTCD1G3V325 749 aa9.34□□□□□ -0.91
PSMB4-203ENST00000474100 IRS4O14654 1257 aaPredicted RBP9.34□□□□□ -0.91
PSMB4-203ENST00000474100 HOXB7P09629 217 aa9.34□□□□□ -0.91
PSMB4-203ENST00000474100 PTPN12Q05209 780 aaKnown RBP9.34□□□□□ -0.91
PSMB4-203ENST00000474100 NBPF9Q3BBW0 867 aa9.34□□□□□ -0.91
PSMB4-203ENST00000474100 USP17L1Q7RTZ2 530 aa9.34□□□□□ -0.91
PSMB4-203ENST00000474100 OGFOD1Q8N543 542 aa9.34□□□□□ -0.91
PSMB4-203ENST00000474100 ERO1AQ96HE7 468 aa9.34□□□□□ -0.91
PSMB4-203ENST00000474100 CFHR5Q9BXR6 569 aa9.34□□□□□ -0.91
PSMB4-203ENST00000474100 MKI67P46013 3256 aaKnown RBP9.34□□□□□ -0.91
PSMB4-203ENST00000474100 ZBED9Q6R2W3 1325 aa9.33□□□□□ -0.92
PSMB4-203ENST00000474100 LAMB2P55268 1798 aa9.33□□□□□ -0.92
PSMB4-203ENST00000474100 ANKRD36CQ5JPF3 1778 aa9.33□□□□□ -0.92
PSMB4-203ENST00000474100 MANSC4A6NHS7 340 aaPredicted RBP9.33□□□□□ -0.92
PSMB4-203ENST00000474100 TWISTNBQ3B726 338 aaPredicted RBP9.33□□□□□ -0.92
PSMB4-203ENST00000474100 SPRYD7Q5W111 196 aa9.33□□□□□ -0.92
PSMB4-203ENST00000474100 CD99L2Q8TCZ2 262 aa9.33□□□□□ -0.92
PSMB4-203ENST00000474100 GMLQ99445 158 aa9.33□□□□□ -0.92
PSMB4-203ENST00000474100 EFCC1Q9HA90 598 aa9.33□□□□□ -0.92
PSMB4-203ENST00000474100 PODXL2Q9NZ53 605 aa9.33□□□□□ -0.92
PSMB4-203ENST00000474100 ANGEL1Q9UNK9 670 aaKnown RBP9.33□□□□□ -0.92
PSMB4-203ENST00000474100 PTPN22Q9Y2R2 807 aa9.33□□□□□ -0.92
PSMB4-203ENST00000474100 LRRC37AA6NMS7 1700 aa9.33□□□□□ -0.92
PSMB4-203ENST00000474100 TAF1P21675 1872 aa9.32□□□□□ -0.92
PSMB4-203ENST00000474100 DLL1O00548 723 aa9.32□□□□□ -0.92
PSMB4-203ENST00000474100 SASH1O94885 1247 aa9.32□□□□□ -0.92
PSMB4-203ENST00000474100 IFNL1Q8IU54 200 aa9.32□□□□□ -0.92
PSMB4-203ENST00000474100 PLBD2Q8NHP8 589 aa9.32□□□□□ -0.92
PSMB4-203ENST00000474100 SLC10A4Q96EP9 437 aa9.32□□□□□ -0.92
PSMB4-203ENST00000474100 SEC31BQ9NQW1 1179 aa9.32□□□□□ -0.92
PSMB4-203ENST00000474100 ZNF609O15014 1411 aa9.31□□□□□ -0.92
PSMB4-203ENST00000474100 DDX60Q8IY21 1712 aaKnown RBP9.31□□□□□ -0.92
PSMB4-203ENST00000474100 WNT10BO00744 389 aa9.31□□□□□ -0.92
PSMB4-203ENST00000474100 HSP90B1P14625 803 aaKnown RBP9.31□□□□□ -0.92
PSMB4-203ENST00000474100 INHBEP58166 350 aa9.31□□□□□ -0.92
PSMB4-203ENST00000474100 SLC4A8Q2Y0W8 1093 aa9.31□□□□□ -0.92
PSMB4-203ENST00000474100 HDGFL1Q5TGJ6 251 aa9.31□□□□□ -0.92
PSMB4-203ENST00000474100 CCDC30Q5VVM6 783 aa9.31□□□□□ -0.92
PSMB4-203ENST00000474100 OTUD7BQ6GQQ9 843 aa9.31□□□□□ -0.92
PSMB4-203ENST00000474100 ANKRD13DQ6ZTN6 518 aa9.31□□□□□ -0.92
PSMB4-203ENST00000474100 PODNQ7Z5L7 613 aa9.31□□□□□ -0.92
PSMB4-203ENST00000474100 APOBEC3FQ8IUX4 373 aaKnown RBP9.31□□□□□ -0.92
PSMB4-203ENST00000474100 ARMC5Q96C12 935 aa9.31□□□□□ -0.92
PSMB4-203ENST00000474100 CCDC85AQ96PX6 553 aaPredicted RBP9.31□□□□□ -0.92
PSMB4-203ENST00000474100 ISCA1Q9BUE6 129 aa9.31□□□□□ -0.92
PSMB4-203ENST00000474100 MXD3Q9BW11 206 aa9.31□□□□□ -0.92
PSMB4-203ENST00000474100 CHPF2Q9P2E5 772 aa9.31□□□□□ -0.92
PSMB4-203ENST00000474100 XDHP47989 1333 aa9.31□□□□□ -0.92
PSMB4-203ENST00000474100 H0YGN5 161 aa9.3□□□□□ -0.92
PSMB4-203ENST00000474100 MYCP01106 439 aaPredicted RBP9.3□□□□□ -0.92
PSMB4-203ENST00000474100 ATP2B4P23634 1241 aa9.3□□□□□ -0.92
PSMB4-203ENST00000474100 CCDC152Q4G0S7 254 aa9.3□□□□□ -0.92
PSMB4-203ENST00000474100 ANKRD18AQ8IVF6 992 aa9.3□□□□□ -0.92
PSMB4-203ENST00000474100 SLC17A8Q8NDX2 589 aa9.3□□□□□ -0.92
PSMB4-203ENST00000474100 YTHDC1Q96MU7 727 aaKnown RBP9.3□□□□□ -0.92
PSMB4-203ENST00000474100 DBF4Q9UBU7 674 aaPredicted RBP9.3□□□□□ -0.92
PSMB4-203ENST00000474100 FZD1Q9UP38 647 aa9.3□□□□□ -0.92
PSMB4-203ENST00000474100 HTTP42858 3142 aa9.29□□□□□ -0.92
PSMB4-203ENST00000474100 IGF2BP3O00425 579 aaKnown RBP eCLIP9.29□□□□□ -0.92
PSMB4-203ENST00000474100 ZBTB48P10074 688 aaPredicted RBP9.29□□□□□ -0.92
PSMB4-203ENST00000474100 SP3Q02447 781 aa9.29□□□□□ -0.92
PSMB4-203ENST00000474100 CRHR2Q13324 411 aa9.29□□□□□ -0.92
PSMB4-203ENST00000474100 SLC9C1Q4G0N8 1177 aa9.29□□□□□ -0.92
PSMB4-203ENST00000474100 LDLRAD1Q5T700 205 aa9.29□□□□□ -0.92
PSMB4-203ENST00000474100 G2E3Q7L622 706 aa9.29□□□□□ -0.92
PSMB4-203ENST00000474100 NBPF11Q86T75 865 aa9.29□□□□□ -0.92
PSMB4-203ENST00000474100 WNK4Q96J92 1243 aa9.29□□□□□ -0.92
PSMB4-203ENST00000474100 CHMP4AQ9BY43 222 aa9.29□□□□□ -0.92
PSMB4-203ENST00000474100 PHAXQ9H814 394 aaKnown RBP9.29□□□□□ -0.92
PSMB4-203ENST00000474100 HYPKQ9NX55 129 aa9.29□□□□□ -0.92
PSMB4-203ENST00000474100 SCN9AQ15858 1988 aa9.29□□□□□ -0.92
PSMB4-203ENST00000474100 COL4A1P02462 1669 aa9.29□□□□□ -0.92
PSMB4-203ENST00000474100 MYO3BQ8WXR4 1341 aa9.29□□□□□ -0.92
PSMB4-203ENST00000474100 PPP1R12BO60237 982 aaPredicted RBP9.28□□□□□ -0.92
PSMB4-203ENST00000474100 ARHGEF6Q15052 776 aa9.28□□□□□ -0.92
PSMB4-203ENST00000474100 DACT2Q5SW24 774 aa9.28□□□□□ -0.92
PSMB4-203ENST00000474100 RIC3Q7Z5B4 369 aa9.28□□□□□ -0.92
PSMB4-203ENST00000474100 KIAA0825Q8IV33 1275 aa9.28□□□□□ -0.92
PSMB4-203ENST00000474100 ZBTB38Q8NAP3 1195 aaPredicted RBP9.28□□□□□ -0.92
PSMB4-203ENST00000474100 ZNF333Q96JL9 665 aa9.28□□□□□ -0.92
PSMB4-203ENST00000474100 CLMNQ96JQ2 1002 aa9.28□□□□□ -0.92
PSMB4-203ENST00000474100 KIAA0100Q14667 2235 aaKnown RBP9.28□□□□□ -0.92
PSMB4-203ENST00000474100 PDE8AO60658 829 aa9.27□□□□□ -0.93
PSMB4-203ENST00000474100 CT47B1P0C2W7 299 aaPredicted RBP9.27□□□□□ -0.93
PSMB4-203ENST00000474100 STRIP1Q5VSL9 837 aa9.27□□□□□ -0.93
PSMB4-203ENST00000474100 MRPL50Q8N5N7 158 aaKnown RBP9.27□□□□□ -0.93
PSMB4-203ENST00000474100 SSH1Q8WYL5 1049 aa9.27□□□□□ -0.93
PSMB4-203ENST00000474100 DPF3Q92784 378 aa9.27□□□□□ -0.93
PSMB4-203ENST00000474100 JARID2Q92833 1246 aaPredicted RBP9.27□□□□□ -0.93
PSMB4-203ENST00000474100 DEFB129Q9H1M3 183 aa9.27□□□□□ -0.93
PSMB4-203ENST00000474100 OCEL1Q9H607 264 aa9.27□□□□□ -0.93
PSMB4-203ENST00000474100 TRIOBPQ9H2D6 2365 aa9.27□□□□□ -0.93
PSMB4-203ENST00000474100 MED23Q9ULK4 1368 aa9.26□□□□□ -0.93
PSMB4-203ENST00000474100 CENPFP49454 3210 aa9.26□□□□□ -0.93
PSMB4-203ENST00000474100 TRIM28Q13263 835 aaKnown RBP9.26□□□□□ -0.93
PSMB4-203ENST00000474100 DLGAP5Q15398 846 aa9.26□□□□□ -0.93
PSMB4-203ENST00000474100 TTLL5Q6EMB2 1281 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms