RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-219ENST00000474036 COX20Q5RI15 118 aa8.12□□□□□ -1.11
FN1-219ENST00000474036 MSL1Q68DK7 614 aa8.12□□□□□ -1.11
FN1-219ENST00000474036 TXNRD3Q86VQ6 643 aa8.12□□□□□ -1.11
FN1-219ENST00000474036 PBXIP1Q96AQ6 731 aa8.12□□□□□ -1.11
FN1-219ENST00000474036 SSBP4Q9BWG4 385 aaPredicted RBP8.12□□□□□ -1.11
FN1-219ENST00000474036 ZMIZ1Q9ULJ6 1067 aa8.12□□□□□ -1.11
FN1-219ENST00000474036 RTCBQ9Y3I0 505 aaKnown RBP8.12□□□□□ -1.11
FN1-219ENST00000474036 UGGT1Q9NYU2 1555 aa8.12□□□□□ -1.11
FN1-219ENST00000474036 TROQ12816 1431 aaPredicted RBP8.12□□□□□ -1.11
FN1-219ENST00000474036 RARAP10276 462 aa8.11□□□□□ -1.11
FN1-219ENST00000474036 EPB42P16452 691 aa8.11□□□□□ -1.11
FN1-219ENST00000474036 CAPN12Q6ZSI9 719 aa8.11□□□□□ -1.11
FN1-219ENST00000474036 ANKLE2Q86XL3 938 aa8.11□□□□□ -1.11
FN1-219ENST00000474036 FAM200AQ8TCP9 573 aa8.11□□□□□ -1.11
FN1-219ENST00000474036 SAP130Q9H0E3 1048 aa8.11□□□□□ -1.11
FN1-219ENST00000474036 NOVA2Q9UNW9 492 aaKnown RBP8.11□□□□□ -1.11
FN1-219ENST00000474036 SRCAPQ6ZRS2 3230 aa8.11□□□□□ -1.11
FN1-219ENST00000474036 A2MP01023 1474 aa8.11□□□□□ -1.11
FN1-219ENST00000474036 TNRQ92752 1358 aa8.1□□□□□ -1.11
FN1-219ENST00000474036 DEAF1O75398 565 aaPredicted RBP8.1□□□□□ -1.11
FN1-219ENST00000474036 GPLD1P80108 840 aa8.1□□□□□ -1.11
FN1-219ENST00000474036 MEX3CQ5U5Q3 659 aaKnown RBP8.1□□□□□ -1.11
FN1-219ENST00000474036 TREML1Q86YW5 311 aa8.1□□□□□ -1.11
FN1-219ENST00000474036 RGL4Q8IZJ4 473 aa8.1□□□□□ -1.11
FN1-219ENST00000474036 STK32AQ8WU08 396 aa8.1□□□□□ -1.11
FN1-219ENST00000474036 KCNMB2Q9Y691 235 aa8.1□□□□□ -1.11
FN1-219ENST00000474036 FAM135AQ9P2D6 1515 aa8.09□□□□□ -1.11
FN1-219ENST00000474036 SPAG9O60271 1321 aaKnown RBP8.09□□□□□ -1.11
FN1-219ENST00000474036 J3QW42 95 aa8.09□□□□□ -1.11
FN1-219ENST00000474036 ATG7O95352 703 aa8.09□□□□□ -1.11
FN1-219ENST00000474036 ELOAQ14241 798 aaKnown RBP8.09□□□□□ -1.11
FN1-219ENST00000474036 OCLNQ16625 522 aa8.09□□□□□ -1.11
FN1-219ENST00000474036 ELMSAN1Q6PJG2 1045 aa8.09□□□□□ -1.11
FN1-219ENST00000474036 FBXO11Q86XK2 927 aa8.09□□□□□ -1.11
FN1-219ENST00000474036 ARID3AQ99856 593 aa8.09□□□□□ -1.11
FN1-219ENST00000474036 SMG9Q9H0W8 520 aaKnown RBP8.09□□□□□ -1.11
FN1-219ENST00000474036 FRRS1LQ9P0K9 344 aa8.09□□□□□ -1.11
FN1-219ENST00000474036 USP21Q9UK80 565 aa8.09□□□□□ -1.11
FN1-219ENST00000474036 CDK11AQ9UQ88 783 aaPredicted RBP8.09□□□□□ -1.11
FN1-219ENST00000474036 UBR1Q8IWV7 1749 aa8.09□□□□□ -1.11
FN1-219ENST00000474036 PRMT3O60678 531 aa8.08□□□□□ -1.12
FN1-219ENST00000474036 H2AFB1P0C5Y9 115 aa8.08□□□□□ -1.12
FN1-219ENST00000474036 H2AFB2P0C5Z0 115 aa8.08□□□□□ -1.12
FN1-219ENST00000474036 ETFBKMTQ8IXQ9 262 aa8.08□□□□□ -1.12
FN1-219ENST00000474036 CMTR1Q8N1G2 835 aaKnown RBP8.08□□□□□ -1.12
FN1-219ENST00000474036 TP53INP1Q96A56 240 aa8.08□□□□□ -1.12
FN1-219ENST00000474036 VTI1AQ96AJ9 217 aa8.08□□□□□ -1.12
FN1-219ENST00000474036 CEP152O94986 1710 aa8.08□□□□□ -1.12
FN1-219ENST00000474036 SCO2A0A1W2PP80 73 aa8.07□□□□□ -1.12
FN1-219ENST00000474036 MMP20O60882 483 aa8.07□□□□□ -1.12
FN1-219ENST00000474036 XYLBO75191 536 aa8.07□□□□□ -1.12
FN1-219ENST00000474036 EGFRP00533 1210 aa8.07□□□□□ -1.12
FN1-219ENST00000474036 NOS3P29474 1203 aa8.07□□□□□ -1.12
FN1-219ENST00000474036 IREB2P48200 963 aaKnown RBP8.07□□□□□ -1.12
FN1-219ENST00000474036 WFDC12Q8WWY7 111 aa8.07□□□□□ -1.12
FN1-219ENST00000474036 TLR7Q9NYK1 1049 aaKnown RBP8.07□□□□□ -1.12
FN1-219ENST00000474036 MED14O60244 1454 aa8.06□□□□□ -1.12
FN1-219ENST00000474036 SETBP1Q9Y6X0 1596 aa8.06□□□□□ -1.12
FN1-219ENST00000474036 HNRNPMP52272 730 aaKnown RBP eCLIP8.06□□□□□ -1.12
FN1-219ENST00000474036 TRIP4Q15650 581 aaPredicted RBP8.06□□□□□ -1.12
FN1-219ENST00000474036 TMEM164Q5U3C3 297 aa8.06□□□□□ -1.12
FN1-219ENST00000474036 WFDC8Q8IUA0 241 aa8.06□□□□□ -1.12
FN1-219ENST00000474036 TTC9Q92623 222 aa8.06□□□□□ -1.12
FN1-219ENST00000474036 NSUN5Q96P11 429 aaKnown RBP8.06□□□□□ -1.12
FN1-219ENST00000474036 KDM5DQ9BY66 1539 aa8.06□□□□□ -1.12
FN1-219ENST00000474036 LRP6O75581 1613 aa8.06□□□□□ -1.12
FN1-219ENST00000474036 COL16A1Q07092 1604 aaPredicted RBP8.05□□□□□ -1.12
FN1-219ENST00000474036 EIF2AK2P19525 551 aaKnown RBP8.05□□□□□ -1.12
FN1-219ENST00000474036 NRLP54845 237 aa8.05□□□□□ -1.12
FN1-219ENST00000474036 PCSK7Q16549 785 aa8.05□□□□□ -1.12
FN1-219ENST00000474036 ARTNQ5T4W7 220 aa8.05□□□□□ -1.12
FN1-219ENST00000474036 MEGF10Q96KG7 1140 aa8.05□□□□□ -1.12
FN1-219ENST00000474036 PSMG3-AS1Q96PY0 264 aa8.05□□□□□ -1.12
FN1-219ENST00000474036 C11orf16Q9NQ32 467 aa8.05□□□□□ -1.12
FN1-219ENST00000474036 PZPP20742 1482 aa8.05□□□□□ -1.12
FN1-219ENST00000474036 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.04□□□□□ -1.12
FN1-219ENST00000474036 DLL1O00548 723 aa8.04□□□□□ -1.12
FN1-219ENST00000474036 TNFRSF10BO14763 440 aa8.04□□□□□ -1.12
FN1-219ENST00000474036 THEMISQ8N1K5 641 aaPredicted RBP8.04□□□□□ -1.12
FN1-219ENST00000474036 DTWD1Q8N5C7 304 aa8.04□□□□□ -1.12
FN1-219ENST00000474036 PLD4Q96BZ4 506 aa8.04□□□□□ -1.12
FN1-219ENST00000474036 SHPRHQ149N8 1683 aa8.04□□□□□ -1.12
FN1-219ENST00000474036 ACIN1Q9UKV3 1341 aaKnown RBP8.03□□□□□ -1.12
FN1-219ENST00000474036 FMN1Q68DA7 1419 aa8.03□□□□□ -1.12
FN1-219ENST00000474036 NLRP1Q9C000 1473 aa8.03□□□□□ -1.12
FN1-219ENST00000474036 LOC102724428A0A0B4J2F2 783 aa8.03□□□□□ -1.12
FN1-219ENST00000474036 ALX3O95076 343 aa8.03□□□□□ -1.12
FN1-219ENST00000474036 SIK1P57059 783 aa8.03□□□□□ -1.12
FN1-219ENST00000474036 MKNK1Q9BUB5 465 aa8.03□□□□□ -1.12
FN1-219ENST00000474036 KRTAP9-2Q9BYQ4 174 aa8.03□□□□□ -1.12
FN1-219ENST00000474036 SLAIN2Q9P270 581 aa8.03□□□□□ -1.12
FN1-219ENST00000474036 FAM135BQ49AJ0 1406 aa8.03□□□□□ -1.12
FN1-219ENST00000474036 PPP1R15AO75807 674 aaPredicted RBP8.02□□□□□ -1.13
FN1-219ENST00000474036 NAA30Q147X3 362 aaPredicted RBP8.02□□□□□ -1.13
FN1-219ENST00000474036 COL13A1Q5TAT6 717 aaPredicted RBP8.02□□□□□ -1.13
FN1-219ENST00000474036 GDF6Q6KF10 455 aaPredicted RBP8.02□□□□□ -1.13
FN1-219ENST00000474036 ADAMTSL4Q6UY14 1074 aa8.02□□□□□ -1.13
FN1-219ENST00000474036 ZFP64Q9NPA5 681 aa8.02□□□□□ -1.13
FN1-219ENST00000474036 JCADQ9P266 1359 aa8.01□□□□□ -1.13
FN1-219ENST00000474036 RXRBP28702 533 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms