RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 CCDC191Q8NCU4 936 aa6.66□□□□□ -1.34
SNRNP40-204ENST00000474025 CCDC85AQ96PX6 553 aaPredicted RBP6.66□□□□□ -1.34
SNRNP40-204ENST00000474025 CFHR5Q9BXR6 569 aa6.66□□□□□ -1.34
SNRNP40-204ENST00000474025 R3HDMLQ9H3Y0 253 aa6.66□□□□□ -1.34
SNRNP40-204ENST00000474025 LAS1LQ9Y4W2 734 aaKnown RBP6.66□□□□□ -1.34
SNRNP40-204ENST00000474025 KIAA0100Q14667 2235 aaKnown RBP6.66□□□□□ -1.34
SNRNP40-204ENST00000474025 MED23Q9ULK4 1368 aa6.66□□□□□ -1.34
SNRNP40-204ENST00000474025 PDE8AO60658 829 aa6.65□□□□□ -1.34
SNRNP40-204ENST00000474025 FKTNO75072 461 aa6.65□□□□□ -1.34
SNRNP40-204ENST00000474025 ATP2B4P23634 1241 aa6.65□□□□□ -1.34
SNRNP40-204ENST00000474025 PTPN12Q05209 780 aaKnown RBP6.65□□□□□ -1.34
SNRNP40-204ENST00000474025 SREBF2Q12772 1141 aa6.65□□□□□ -1.34
SNRNP40-204ENST00000474025 TTLL12Q14166 644 aaPredicted RBP6.65□□□□□ -1.34
SNRNP40-204ENST00000474025 INTS3Q68E01 1043 aaKnown RBP6.65□□□□□ -1.34
SNRNP40-204ENST00000474025 RIC3Q7Z5B4 369 aa6.65□□□□□ -1.34
SNRNP40-204ENST00000474025 ANKRD18AQ8IVF6 992 aa6.65□□□□□ -1.34
SNRNP40-204ENST00000474025 JARID2Q92833 1246 aaPredicted RBP6.65□□□□□ -1.34
SNRNP40-204ENST00000474025 MYD88Q99836 296 aa6.65□□□□□ -1.34
SNRNP40-204ENST00000474025 MXD3Q9BW11 206 aa6.65□□□□□ -1.34
SNRNP40-204ENST00000474025 PHAXQ9H814 394 aaKnown RBP6.65□□□□□ -1.34
SNRNP40-204ENST00000474025 MBIPQ9NS73 344 aa6.65□□□□□ -1.34
SNRNP40-204ENST00000474025 CWC25Q9NXE8 425 aaPredicted RBP6.65□□□□□ -1.34
SNRNP40-204ENST00000474025 UNC80Q8N2C7 3258 aa6.65□□□□□ -1.34
SNRNP40-204ENST00000474025 SASH1O94885 1247 aa6.64□□□□□ -1.35
SNRNP40-204ENST00000474025 ZNF853P0CG23 659 aa6.64□□□□□ -1.35
SNRNP40-204ENST00000474025 NF2P35240 595 aa6.64□□□□□ -1.35
SNRNP40-204ENST00000474025 CTSWP56202 376 aa6.64□□□□□ -1.35
SNRNP40-204ENST00000474025 RALBP1Q15311 655 aa6.64□□□□□ -1.35
SNRNP40-204ENST00000474025 LDLRAD1Q5T700 205 aa6.64□□□□□ -1.35
SNRNP40-204ENST00000474025 STRIP1Q5VSL9 837 aa6.64□□□□□ -1.35
SNRNP40-204ENST00000474025 SPRYD7Q5W111 196 aa6.64□□□□□ -1.35
SNRNP40-204ENST00000474025 OGFOD1Q8N543 542 aa6.64□□□□□ -1.35
SNRNP40-204ENST00000474025 RUNDC1Q96C34 613 aa6.64□□□□□ -1.35
SNRNP40-204ENST00000474025 ZBED3Q96IU2 234 aaPredicted RBP6.64□□□□□ -1.35
SNRNP40-204ENST00000474025 CDC5LQ99459 802 aaKnown RBP6.64□□□□□ -1.35
SNRNP40-204ENST00000474025 BSDC1Q9NW68 430 aaPredicted RBP6.64□□□□□ -1.35
SNRNP40-204ENST00000474025 MINPP1Q9UNW1 487 aa6.64□□□□□ -1.35
SNRNP40-204ENST00000474025 MYO3BQ8WXR4 1341 aa6.64□□□□□ -1.35
SNRNP40-204ENST00000474025 SSC5DA1L4H1 1573 aa6.63□□□□□ -1.35
SNRNP40-204ENST00000474025 SNPHO15079 494 aa6.63□□□□□ -1.35
SNRNP40-204ENST00000474025 COL1A1P02452 1464 aaPredicted RBP6.63□□□□□ -1.35
SNRNP40-204ENST00000474025 IGKV5-2P06315 115 aa6.63□□□□□ -1.35
SNRNP40-204ENST00000474025 MMP14P50281 582 aa6.63□□□□□ -1.35
SNRNP40-204ENST00000474025 CCT4P50991 539 aaKnown RBP6.63□□□□□ -1.35
SNRNP40-204ENST00000474025 OTOP1Q7RTM1 612 aa6.63□□□□□ -1.35
SNRNP40-204ENST00000474025 ARMC9Q7Z3E5 817 aa6.63□□□□□ -1.35
SNRNP40-204ENST00000474025 TXNRD3Q86VQ6 643 aa6.63□□□□□ -1.35
SNRNP40-204ENST00000474025 APOBEC3FQ8IUX4 373 aaKnown RBP6.63□□□□□ -1.35
SNRNP40-204ENST00000474025 TTLL11Q8NHH1 800 aa6.63□□□□□ -1.35
SNRNP40-204ENST00000474025 METTL22Q9BUU2 404 aaPredicted RBP6.63□□□□□ -1.35
SNRNP40-204ENST00000474025 COA1Q9GZY4 146 aa6.63□□□□□ -1.35
SNRNP40-204ENST00000474025 TRIOBPQ9H2D6 2365 aa6.63□□□□□ -1.35
SNRNP40-204ENST00000474025 GREM2Q9H772 168 aa6.63□□□□□ -1.35
SNRNP40-204ENST00000474025 PLSCR2Q9NRY7 297 aa6.63□□□□□ -1.35
SNRNP40-204ENST00000474025 FZD1Q9UP38 647 aa6.63□□□□□ -1.35
SNRNP40-204ENST00000474025 SPEF2Q9C093 1822 aa6.62□□□□□ -1.35
SNRNP40-204ENST00000474025 LAMB1P07942 1786 aa6.62□□□□□ -1.35
SNRNP40-204ENST00000474025 VCANP13611 3396 aa6.62□□□□□ -1.35
SNRNP40-204ENST00000474025 MYBBP1AQ9BQG0 1328 aaKnown RBP6.62□□□□□ -1.35
SNRNP40-204ENST00000474025 IGF2BP3O00425 579 aaKnown RBP eCLIP6.62□□□□□ -1.35
SNRNP40-204ENST00000474025 ST18O60284 1047 aa6.62□□□□□ -1.35
SNRNP40-204ENST00000474025 ALDH1A1P00352 501 aa6.62□□□□□ -1.35
SNRNP40-204ENST00000474025 KLRK1P26718 216 aa6.62□□□□□ -1.35
SNRNP40-204ENST00000474025 PRKG1Q13976 671 aa6.62□□□□□ -1.35
SNRNP40-204ENST00000474025 MAP3K11Q16584 847 aa6.62□□□□□ -1.35
SNRNP40-204ENST00000474025 TTLL5Q6EMB2 1281 aa6.62□□□□□ -1.35
SNRNP40-204ENST00000474025 KIAA0825Q8IV33 1275 aa6.62□□□□□ -1.35
SNRNP40-204ENST00000474025 FBXW7Q969H0 707 aa6.62□□□□□ -1.35
SNRNP40-204ENST00000474025 IFT57Q9NWB7 429 aa6.62□□□□□ -1.35
SNRNP40-204ENST00000474025 ANGEL1Q9UNK9 670 aaKnown RBP6.62□□□□□ -1.35
SNRNP40-204ENST00000474025 ADAMTS8Q9UP79 889 aa6.62□□□□□ -1.35
SNRNP40-204ENST00000474025 MAP3K2Q9Y2U5 619 aa6.62□□□□□ -1.35
SNRNP40-204ENST00000474025 TRIM17Q9Y577 477 aa6.62□□□□□ -1.35
SNRNP40-204ENST00000474025 RBBP6Q7Z6E9 1792 aaKnown RBP6.62□□□□□ -1.35
SNRNP40-204ENST00000474025 MYH3P11055 1940 aa6.61□□□□□ -1.35
SNRNP40-204ENST00000474025 MANSC4A6NHS7 340 aaPredicted RBP6.61□□□□□ -1.35
SNRNP40-204ENST00000474025 ELL2O00472 640 aaPredicted RBP6.61□□□□□ -1.35
SNRNP40-204ENST00000474025 DLL1O00548 723 aa6.61□□□□□ -1.35
SNRNP40-204ENST00000474025 DDX58O95786 925 aaKnown RBP6.61□□□□□ -1.35
SNRNP40-204ENST00000474025 ZBTB48P10074 688 aaPredicted RBP6.61□□□□□ -1.35
SNRNP40-204ENST00000474025 INHBEP58166 350 aa6.61□□□□□ -1.35
SNRNP40-204ENST00000474025 WDR43Q15061 677 aaKnown RBP eCLIP6.61□□□□□ -1.35
SNRNP40-204ENST00000474025 C8orf58Q8NAV2 365 aa6.61□□□□□ -1.35
SNRNP40-204ENST00000474025 ARMC5Q96C12 935 aa6.61□□□□□ -1.35
SNRNP40-204ENST00000474025 WNK4Q96J92 1243 aa6.61□□□□□ -1.35
SNRNP40-204ENST00000474025 CLMNQ96JQ2 1002 aa6.61□□□□□ -1.35
SNRNP40-204ENST00000474025 DEFB129Q9H1M3 183 aa6.61□□□□□ -1.35
SNRNP40-204ENST00000474025 LEMD3Q9Y2U8 911 aa6.61□□□□□ -1.35
SNRNP40-204ENST00000474025 EYSQ5T1H1 3165 aa6.61□□□□□ -1.35
SNRNP40-204ENST00000474025 ZNF804BA4D1E1 1349 aa6.6□□□□□ -1.35
SNRNP40-204ENST00000474025 IRS2Q9Y4H2 1338 aa6.6□□□□□ -1.35
SNRNP40-204ENST00000474025 DNAH12Q6ZR08 3092 aa6.6□□□□□ -1.35
SNRNP40-204ENST00000474025 PI4KAP2A4QPH2 592 aa6.6□□□□□ -1.35
SNRNP40-204ENST00000474025 NEURL1BA8MQ27 555 aa6.6□□□□□ -1.35
SNRNP40-204ENST00000474025 PPP1R12BO60237 982 aaPredicted RBP6.6□□□□□ -1.35
SNRNP40-204ENST00000474025 GJA5P36382 358 aa6.6□□□□□ -1.35
SNRNP40-204ENST00000474025 FXR1P51114 621 aaKnown RBP eCLIP6.6□□□□□ -1.35
SNRNP40-204ENST00000474025 GNAI1P63096 354 aa6.6□□□□□ -1.35
SNRNP40-204ENST00000474025 GTF2IP78347 998 aa6.6□□□□□ -1.35
SNRNP40-204ENST00000474025 PLCB2Q00722 1185 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms