RNA–Protein interactions for RNA: ENST00000473978.5

PCYT1A-214, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-214ENST00000473978 PCDHAC2Q9Y5I4 1007 aa16.62■□□□□ 0.25
PCYT1A-214ENST00000473978 ZNF804BA4D1E1 1349 aa16.61■□□□□ 0.25
PCYT1A-214ENST00000473978 CCL15-CCL14A0A0B4J2E2 113 aa16.61■□□□□ 0.25
PCYT1A-214ENST00000473978 ECM2O94769 699 aaPredicted RBP16.61■□□□□ 0.25
PCYT1A-214ENST00000473978 KIF22Q14807 665 aa16.61■□□□□ 0.25
PCYT1A-214ENST00000473978 DLGAP5Q15398 846 aa16.61■□□□□ 0.25
PCYT1A-214ENST00000473978 CCL15Q16663 113 aa16.61■□□□□ 0.25
PCYT1A-214ENST00000473978 MTMR10Q9NXD2 777 aa16.61■□□□□ 0.25
PCYT1A-214ENST00000473978 LAMA2P24043 3122 aaKnown RBP16.6■□□□□ 0.25
PCYT1A-214ENST00000473978 CLRN2A0PK11 232 aa16.6■□□□□ 0.25
PCYT1A-214ENST00000473978 EVI5O60447 810 aa16.6■□□□□ 0.25
PCYT1A-214ENST00000473978 TLR2O60603 784 aa16.6■□□□□ 0.25
PCYT1A-214ENST00000473978 GNRH1P01148 92 aa16.6■□□□□ 0.25
PCYT1A-214ENST00000473978 CCL5P13501 91 aa16.6■□□□□ 0.25
PCYT1A-214ENST00000473978 PRMT2P55345 433 aa16.6■□□□□ 0.25
PCYT1A-214ENST00000473978 KRT24Q2M2I5 525 aa16.6■□□□□ 0.25
PCYT1A-214ENST00000473978 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.6■□□□□ 0.25
PCYT1A-214ENST00000473978 OTOFQ9HC10 1997 aa16.59■□□□□ 0.25
PCYT1A-214ENST00000473978 FARP2O94887 1054 aaPredicted RBP16.59■□□□□ 0.25
PCYT1A-214ENST00000473978 MINPP1Q9UNW1 487 aa16.59■□□□□ 0.25
PCYT1A-214ENST00000473978 CTGFP29279 349 aa16.58■□□□□ 0.24
PCYT1A-214ENST00000473978 CCT4P50991 539 aaKnown RBP16.58■□□□□ 0.24
PCYT1A-214ENST00000473978 GTF2A2P52657 109 aa16.58■□□□□ 0.24
PCYT1A-214ENST00000473978 GTF2IP78347 998 aa16.58■□□□□ 0.24
PCYT1A-214ENST00000473978 MTMR14Q8NCE2 650 aa16.58■□□□□ 0.24
PCYT1A-214ENST00000473978 JARID2Q92833 1246 aaPredicted RBP16.58■□□□□ 0.24
PCYT1A-214ENST00000473978 RNF208Q9H0X6 261 aa16.58■□□□□ 0.24
PCYT1A-214ENST00000473978 AOX1Q06278 1338 aa16.57■□□□□ 0.24
PCYT1A-214ENST00000473978 PRUNE2Q8WUY3 3088 aa16.57■□□□□ 0.24
PCYT1A-214ENST00000473978 MUC3AQ02505 3323 aa16.57■□□□□ 0.24
PCYT1A-214ENST00000473978 PDE8AO60658 829 aa16.57■□□□□ 0.24
PCYT1A-214ENST00000473978 GRK4P32298 578 aa16.57■□□□□ 0.24
PCYT1A-214ENST00000473978 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.57■□□□□ 0.24
PCYT1A-214ENST00000473978 VEZTQ9HBM0 779 aa16.57■□□□□ 0.24
PCYT1A-214ENST00000473978 RIPOR2Q9Y4F9 1068 aa16.57■□□□□ 0.24
PCYT1A-214ENST00000473978 HSP90B1P14625 803 aaKnown RBP16.56■□□□□ 0.24
PCYT1A-214ENST00000473978 KLRK1P26718 216 aa16.56■□□□□ 0.24
PCYT1A-214ENST00000473978 RASA3Q14644 834 aa16.56■□□□□ 0.24
PCYT1A-214ENST00000473978 U2AF1L4Q8WU68 220 aaKnown RBP16.56■□□□□ 0.24
PCYT1A-214ENST00000473978 PRMT6Q96LA8 375 aaPredicted RBP16.56■□□□□ 0.24
PCYT1A-214ENST00000473978 GDF15Q99988 308 aa16.56■□□□□ 0.24
PCYT1A-214ENST00000473978 BABAM1Q9NWV8 329 aa16.56■□□□□ 0.24
PCYT1A-214ENST00000473978 SRRDQ9UH36 339 aa16.56■□□□□ 0.24
PCYT1A-214ENST00000473978 BMP8BP34820 402 aa16.55■□□□□ 0.24
PCYT1A-214ENST00000473978 CERS5Q8N5B7 392 aa16.55■□□□□ 0.24
PCYT1A-214ENST00000473978 TRIM47Q96LD4 638 aa16.55■□□□□ 0.24
PCYT1A-214ENST00000473978 PRDM6Q9NQX0 595 aa16.55■□□□□ 0.24
PCYT1A-214ENST00000473978 ECM29Q5VYK3 1845 aa16.55■□□□□ 0.24
PCYT1A-214ENST00000473978 SPDYE2BA6NHP3 402 aa16.54■□□□□ 0.24
PCYT1A-214ENST00000473978 MYO1BO43795 1136 aa16.54■□□□□ 0.24
PCYT1A-214ENST00000473978 WDHD1O75717 1129 aaPredicted RBP16.54■□□□□ 0.24
PCYT1A-214ENST00000473978 SPDYE6P0CI01 402 aa16.54■□□□□ 0.24
PCYT1A-214ENST00000473978 OSBPP22059 807 aa16.54■□□□□ 0.24
PCYT1A-214ENST00000473978 VGLL4Q14135 290 aa16.54■□□□□ 0.24
PCYT1A-214ENST00000473978 CFAP100Q494V2 611 aa16.54■□□□□ 0.24
PCYT1A-214ENST00000473978 RAET1EQ8TD07 263 aa16.54■□□□□ 0.24
PCYT1A-214ENST00000473978 BSDC1Q9NW68 430 aaPredicted RBP16.54■□□□□ 0.24
PCYT1A-214ENST00000473978 PCCAP05165 728 aaPredicted RBP16.53■□□□□ 0.24
PCYT1A-214ENST00000473978 PSMC4P43686 418 aa16.53■□□□□ 0.24
PCYT1A-214ENST00000473978 BCAMP50895 628 aa16.53■□□□□ 0.24
PCYT1A-214ENST00000473978 LRIT3Q3SXY7 679 aa16.53■□□□□ 0.24
PCYT1A-214ENST00000473978 HDGFL1Q5TGJ6 251 aa16.53■□□□□ 0.24
PCYT1A-214ENST00000473978 CDC5LQ99459 802 aaKnown RBP16.53■□□□□ 0.24
PCYT1A-214ENST00000473978 DBF4Q9UBU7 674 aaPredicted RBP16.53■□□□□ 0.24
PCYT1A-214ENST00000473978 BIN2Q9UBW5 565 aaPredicted RBP16.53■□□□□ 0.24
PCYT1A-214ENST00000473978 BTBD19C9JJ37 291 aa16.53■□□□□ 0.24
PCYT1A-214ENST00000473978 F8W031 263 aaPredicted RBP16.53■□□□□ 0.24
PCYT1A-214ENST00000473978 SGPL1O95470 568 aa16.53■□□□□ 0.24
PCYT1A-214ENST00000473978 C17orf99Q6UX52 265 aa16.53■□□□□ 0.24
PCYT1A-214ENST00000473978 CDAN1Q8IWY9 1227 aa16.53■□□□□ 0.24
PCYT1A-214ENST00000473978 LEMD3Q9Y2U8 911 aa16.53■□□□□ 0.24
PCYT1A-214ENST00000473978 UNC93B1Q9H1C4 597 aa16.52■□□□□ 0.23
PCYT1A-214ENST00000473978 ZCCHC17Q9NP64 241 aaKnown RBP16.52■□□□□ 0.23
PCYT1A-214ENST00000473978 MYPNQ86TC9 1320 aa16.51■□□□□ 0.23
PCYT1A-214ENST00000473978 MAPK8IP3Q9UPT6 1336 aa16.51■□□□□ 0.23
PCYT1A-214ENST00000473978 SPEF2Q9C093 1822 aa16.51■□□□□ 0.23
PCYT1A-214ENST00000473978 HOXD10P28358 340 aa16.51■□□□□ 0.23
PCYT1A-214ENST00000473978 UBXN2AP68543 259 aa16.51■□□□□ 0.23
PCYT1A-214ENST00000473978 MAP3K9P80192 1104 aa16.51■□□□□ 0.23
PCYT1A-214ENST00000473978 RIC3Q7Z5B4 369 aa16.51■□□□□ 0.23
PCYT1A-214ENST00000473978 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.51■□□□□ 0.23
PCYT1A-214ENST00000473978 MYD88Q99836 296 aa16.51■□□□□ 0.23
PCYT1A-214ENST00000473978 HYPKQ9NX55 129 aa16.51■□□□□ 0.23
PCYT1A-214ENST00000473978 CPA4Q9UI42 421 aa16.51■□□□□ 0.23
PCYT1A-214ENST00000473978 FMNL1O95466 1100 aaPredicted RBP16.5■□□□□ 0.23
PCYT1A-214ENST00000473978 CETPP11597 493 aa16.5■□□□□ 0.23
PCYT1A-214ENST00000473978 RIPK4P57078 832 aa16.5■□□□□ 0.23
PCYT1A-214ENST00000473978 CCDC191Q8NCU4 936 aa16.5■□□□□ 0.23
PCYT1A-214ENST00000473978 TEPSINQ96N21 525 aa16.5■□□□□ 0.23
PCYT1A-214ENST00000473978 GREM2Q9H772 168 aa16.5■□□□□ 0.23
PCYT1A-214ENST00000473978 CD209Q9NNX6 404 aa16.5■□□□□ 0.23
PCYT1A-214ENST00000473978 ALPK3Q96L96 1907 aa16.5■□□□□ 0.23
PCYT1A-214ENST00000473978 SPDYE5A6NIY4 337 aa16.49■□□□□ 0.23
PCYT1A-214ENST00000473978 CTSWP56202 376 aa16.49■□□□□ 0.23
PCYT1A-214ENST00000473978 HELBQ8NG08 1087 aaPredicted RBP16.49■□□□□ 0.23
PCYT1A-214ENST00000473978 ZMYND8Q9ULU4 1186 aaPredicted RBP16.49■□□□□ 0.23
PCYT1A-214ENST00000473978 CSADQ9Y600 493 aa16.49■□□□□ 0.23
PCYT1A-214ENST00000473978 TTC28Q96AY4 2481 aa16.48■□□□□ 0.23
PCYT1A-214ENST00000473978 TFRCP02786 760 aaKnown RBP16.48■□□□□ 0.23
PCYT1A-214ENST00000473978 PRKCZQ05513 592 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms