RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 HDAC9Q9UKV0 1011 aa19.59■□□□□ 0.73
CLIC3-201ENST00000473911 NBPF9Q3BBW0 867 aa19.58■□□□□ 0.72
CLIC3-201ENST00000473911 KIAA0825Q8IV33 1275 aa19.58■□□□□ 0.72
CLIC3-201ENST00000473911 PITPNM2Q9BZ72 1349 aa19.57■□□□□ 0.72
CLIC3-201ENST00000473911 IRS2Q9Y4H2 1338 aa19.57■□□□□ 0.72
CLIC3-201ENST00000473911 MMP14P50281 582 aa19.57■□□□□ 0.72
CLIC3-201ENST00000473911 RABL6Q3YEC7 729 aaPredicted RBP19.57■□□□□ 0.72
CLIC3-201ENST00000473911 PUS3Q9BZE2 481 aaKnown RBP19.57■□□□□ 0.72
CLIC3-201ENST00000473911 SAGE1Q9NXZ1 904 aa19.57■□□□□ 0.72
CLIC3-201ENST00000473911 UBE2Q2LH0YL09 131 aa19.56■□□□□ 0.72
CLIC3-201ENST00000473911 ANKRD44Q8N8A2 993 aa19.56■□□□□ 0.72
CLIC3-201ENST00000473911 USP44Q9H0E7 712 aa19.56■□□□□ 0.72
CLIC3-201ENST00000473911 NOB1Q9ULX3 412 aaKnown RBP19.56■□□□□ 0.72
CLIC3-201ENST00000473911 SASH1O94885 1247 aa19.55■□□□□ 0.72
CLIC3-201ENST00000473911 IL1R1P14778 569 aa19.55■□□□□ 0.72
CLIC3-201ENST00000473911 PAPPA2Q9BXP8 1791 aa19.55■□□□□ 0.72
CLIC3-201ENST00000473911 MROH5Q6ZUA9 1318 aa19.54■□□□□ 0.72
CLIC3-201ENST00000473911 WNT10BO00744 389 aa19.54■□□□□ 0.72
CLIC3-201ENST00000473911 UBE4AQ14139 1066 aa19.54■□□□□ 0.72
CLIC3-201ENST00000473911 METTL24Q5JXM2 366 aa19.54■□□□□ 0.72
CLIC3-201ENST00000473911 API5Q9BZZ5 524 aaKnown RBP19.54■□□□□ 0.72
CLIC3-201ENST00000473911 SOX10P56693 466 aa19.53■□□□□ 0.72
CLIC3-201ENST00000473911 DIEXFQ68CQ4 756 aaKnown RBP19.53■□□□□ 0.72
CLIC3-201ENST00000473911 PCDH10Q9P2E7 1040 aa19.53■□□□□ 0.72
CLIC3-201ENST00000473911 JAG2Q9Y219 1238 aa19.53■□□□□ 0.72
CLIC3-201ENST00000473911 RIPOR2Q9Y4F9 1068 aa19.53■□□□□ 0.72
CLIC3-201ENST00000473911 F8W031 263 aaPredicted RBP19.52■□□□□ 0.72
CLIC3-201ENST00000473911 HIBADHP31937 336 aaKnown RBP19.52■□□□□ 0.72
CLIC3-201ENST00000473911 GYG1P46976 350 aa19.52■□□□□ 0.72
CLIC3-201ENST00000473911 DLGAP5Q15398 846 aa19.52■□□□□ 0.72
CLIC3-201ENST00000473911 LRRC24Q50LG9 513 aa19.52■□□□□ 0.72
CLIC3-201ENST00000473911 CERS5Q8N5B7 392 aa19.52■□□□□ 0.72
CLIC3-201ENST00000473911 PDE4DIPQ5VU43 2346 aa19.51■□□□□ 0.71
CLIC3-201ENST00000473911 UBTFL1P0CB47 393 aaPredicted RBP19.51■□□□□ 0.71
CLIC3-201ENST00000473911 RARSP54136 660 aaKnown RBP19.51■□□□□ 0.71
CLIC3-201ENST00000473911 MKRN3Q13064 507 aaKnown RBP19.51■□□□□ 0.71
CLIC3-201ENST00000473911 VPS37DQ86XT2 251 aa19.51■□□□□ 0.71
CLIC3-201ENST00000473911 MIER1Q8N108 512 aa19.51■□□□□ 0.71
CLIC3-201ENST00000473911 KLHDC4Q8TBB5 520 aa19.51■□□□□ 0.71
CLIC3-201ENST00000473911 TBC1D8O95759 1140 aa19.5■□□□□ 0.71
CLIC3-201ENST00000473911 FKBP1AP62942 108 aaKnown RBP19.5■□□□□ 0.71
CLIC3-201ENST00000473911 FKBP1BP68106 108 aa19.5■□□□□ 0.71
CLIC3-201ENST00000473911 APOBEC3FQ8IUX4 373 aaKnown RBP19.5■□□□□ 0.71
CLIC3-201ENST00000473911 FAM84BQ96KN1 310 aaPredicted RBP19.5■□□□□ 0.71
CLIC3-201ENST00000473911 FZD1Q9UP38 647 aa19.5■□□□□ 0.71
CLIC3-201ENST00000473911 KIF16BQ96L93 1317 aa19.5■□□□□ 0.71
CLIC3-201ENST00000473911 NF2P35240 595 aa19.49■□□□□ 0.71
CLIC3-201ENST00000473911 TTLL12Q14166 644 aaPredicted RBP19.49■□□□□ 0.71
CLIC3-201ENST00000473911 PDE8BO95263 885 aa19.48■□□□□ 0.71
CLIC3-201ENST00000473911 PRKG1Q13976 671 aa19.48■□□□□ 0.71
CLIC3-201ENST00000473911 CFAP100Q494V2 611 aa19.48■□□□□ 0.71
CLIC3-201ENST00000473911 CAVIN4Q5BKX8 364 aa19.48■□□□□ 0.71
CLIC3-201ENST00000473911 CTU1Q7Z7A3 348 aaKnown RBP19.48■□□□□ 0.71
CLIC3-201ENST00000473911 TDRD7Q8NHU6 1098 aaKnown RBP19.48■□□□□ 0.71
CLIC3-201ENST00000473911 R3HDMLQ9H3Y0 253 aa19.48■□□□□ 0.71
CLIC3-201ENST00000473911 HDAC5Q9UQL6 1122 aa19.48■□□□□ 0.71
CLIC3-201ENST00000473911 PCDHAC2Q9Y5I4 1007 aa19.48■□□□□ 0.71
CLIC3-201ENST00000473911 FAM205AQ6ZU69 1335 aa19.48■□□□□ 0.71
CLIC3-201ENST00000473911 MYO1BO43795 1136 aa19.47■□□□□ 0.71
CLIC3-201ENST00000473911 FRAT2O75474 233 aaPredicted RBP19.47■□□□□ 0.71
CLIC3-201ENST00000473911 RBM5P52756 815 aaKnown RBP eCLIP19.47■□□□□ 0.71
CLIC3-201ENST00000473911 PTPN12Q05209 780 aaKnown RBP19.47■□□□□ 0.71
CLIC3-201ENST00000473911 MFSD14BQ5SR56 506 aa19.47■□□□□ 0.71
CLIC3-201ENST00000473911 ZBED3Q96IU2 234 aaPredicted RBP19.47■□□□□ 0.71
CLIC3-201ENST00000473911 A0A1B0GUL6 1792 aa19.47■□□□□ 0.71
CLIC3-201ENST00000473911 HNRNPUQ00839 825 aaKnown RBP eCLIP19.46■□□□□ 0.71
CLIC3-201ENST00000473911 MTMR14Q8NCE2 650 aa19.46■□□□□ 0.71
CLIC3-201ENST00000473911 ZNF296Q8WUU4 475 aaPredicted RBP19.46■□□□□ 0.71
CLIC3-201ENST00000473911 IQSEC3Q9UPP2 1182 aaPredicted RBP19.46■□□□□ 0.71
CLIC3-201ENST00000473911 EYA2O00167 538 aa19.45■□□□□ 0.7
CLIC3-201ENST00000473911 IFIT1P09914 478 aaKnown RBP19.45■□□□□ 0.7
CLIC3-201ENST00000473911 RFX5P48382 616 aaPredicted RBP19.45■□□□□ 0.7
CLIC3-201ENST00000473911 CHAF1AQ13111 956 aaPredicted RBP19.45■□□□□ 0.7
CLIC3-201ENST00000473911 PUM3Q15397 648 aaKnown RBP19.45■□□□□ 0.7
CLIC3-201ENST00000473911 FBXO33Q7Z6M2 555 aa19.45■□□□□ 0.7
CLIC3-201ENST00000473911 VGLL2Q8N8G2 317 aa19.45■□□□□ 0.7
CLIC3-201ENST00000473911 ARHGAP45Q92619 1136 aa19.45■□□□□ 0.7
CLIC3-201ENST00000473911 LRRFIP2Q9Y608 721 aaKnown RBP19.45■□□□□ 0.7
CLIC3-201ENST00000473911 AOX1Q06278 1338 aa19.45■□□□□ 0.7
CLIC3-201ENST00000473911 HTTP42858 3142 aa19.45■□□□□ 0.7
CLIC3-201ENST00000473911 CLRN2A0PK11 232 aa19.44■□□□□ 0.7
CLIC3-201ENST00000473911 SPDYE2BA6NHP3 402 aa19.44■□□□□ 0.7
CLIC3-201ENST00000473911 IPO8O15397 1037 aaKnown RBP19.44■□□□□ 0.7
CLIC3-201ENST00000473911 SPDYE6P0CI01 402 aa19.44■□□□□ 0.7
CLIC3-201ENST00000473911 TM4SF4P48230 202 aa19.44■□□□□ 0.7
CLIC3-201ENST00000473911 SIL1Q9H173 461 aa19.44■□□□□ 0.7
CLIC3-201ENST00000473911 DEFB129Q9H1M3 183 aa19.44■□□□□ 0.7
CLIC3-201ENST00000473911 VEZTQ9HBM0 779 aa19.44■□□□□ 0.7
CLIC3-201ENST00000473911 TTF2Q9UNY4 1162 aaKnown RBP19.44■□□□□ 0.7
CLIC3-201ENST00000473911 HPS5Q9UPZ3 1129 aa19.44■□□□□ 0.7
CLIC3-201ENST00000473911 ARMC9Q7Z3E5 817 aa19.43■□□□□ 0.7
CLIC3-201ENST00000473911 REM2Q8IYK8 340 aaPredicted RBP19.43■□□□□ 0.7
CLIC3-201ENST00000473911 FRAT1Q92837 279 aaPredicted RBP19.43■□□□□ 0.7
CLIC3-201ENST00000473911 PRMT6Q96LA8 375 aaPredicted RBP19.43■□□□□ 0.7
CLIC3-201ENST00000473911 MEIS3Q99687 375 aa19.43■□□□□ 0.7
CLIC3-201ENST00000473911 SLC5A1P13866 664 aa19.42■□□□□ 0.7
CLIC3-201ENST00000473911 BCAMP50895 628 aa19.42■□□□□ 0.7
CLIC3-201ENST00000473911 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.42■□□□□ 0.7
CLIC3-201ENST00000473911 COL1A1P02452 1464 aaPredicted RBP19.41■□□□□ 0.7
CLIC3-201ENST00000473911 SSC5DA1L4H1 1573 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms