RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 VCANP13611 3396 aa13.76□□□□□ -0.21
SSBP1-209ENST00000473783 ALPK3Q96L96 1907 aa13.76□□□□□ -0.21
SSBP1-209ENST00000473783 MYH3P11055 1940 aa13.75□□□□□ -0.21
SSBP1-209ENST00000473783 CCL15-CCL14A0A0B4J2E2 113 aa13.75□□□□□ -0.21
SSBP1-209ENST00000473783 TLR2O60603 784 aa13.75□□□□□ -0.21
SSBP1-209ENST00000473783 FARP2O94887 1054 aaPredicted RBP13.75□□□□□ -0.21
SSBP1-209ENST00000473783 GTF2A2P52657 109 aa13.75□□□□□ -0.21
SSBP1-209ENST00000473783 CCL15Q16663 113 aa13.75□□□□□ -0.21
SSBP1-209ENST00000473783 TTLL5Q6EMB2 1281 aa13.75□□□□□ -0.21
SSBP1-209ENST00000473783 ZBTB38Q8NAP3 1195 aaPredicted RBP13.75□□□□□ -0.21
SSBP1-209ENST00000473783 MTMR14Q8NCE2 650 aa13.75□□□□□ -0.21
SSBP1-209ENST00000473783 MTMR10Q9NXD2 777 aa13.75□□□□□ -0.21
SSBP1-209ENST00000473783 STAP2Q9UGK3 403 aa13.75□□□□□ -0.21
SSBP1-209ENST00000473783 MYO1BO43795 1136 aa13.74□□□□□ -0.21
SSBP1-209ENST00000473783 GRK4P32298 578 aa13.74□□□□□ -0.21
SSBP1-209ENST00000473783 BMP8BP34820 402 aa13.74□□□□□ -0.21
SSBP1-209ENST00000473783 NBPF12Q5TAG4 269 aaPredicted RBP13.74□□□□□ -0.21
SSBP1-209ENST00000473783 FAM43AQ8N2R8 423 aa13.74□□□□□ -0.21
SSBP1-209ENST00000473783 ELP3Q9H9T3 547 aa13.74□□□□□ -0.21
SSBP1-209ENST00000473783 ZCCHC17Q9NP64 241 aaKnown RBP13.74□□□□□ -0.21
SSBP1-209ENST00000473783 PDE8AO60658 829 aa13.73□□□□□ -0.21
SSBP1-209ENST00000473783 CCL5P13501 91 aa13.73□□□□□ -0.21
SSBP1-209ENST00000473783 Q7L0L9 218 aa13.73□□□□□ -0.21
SSBP1-209ENST00000473783 PLEKHF1Q96S99 279 aa13.73□□□□□ -0.21
SSBP1-209ENST00000473783 CDC5LQ99459 802 aaKnown RBP13.73□□□□□ -0.21
SSBP1-209ENST00000473783 RNF208Q9H0X6 261 aa13.73□□□□□ -0.21
SSBP1-209ENST00000473783 PRDM6Q9NQX0 595 aa13.73□□□□□ -0.21
SSBP1-209ENST00000473783 CHPF2Q9P2E5 772 aa13.73□□□□□ -0.21
SSBP1-209ENST00000473783 SRRDQ9UH36 339 aa13.73□□□□□ -0.21
SSBP1-209ENST00000473783 CAPN2P17655 700 aa13.72□□□□□ -0.21
SSBP1-209ENST00000473783 PPP2R1AP30153 589 aa13.72□□□□□ -0.21
SSBP1-209ENST00000473783 CCT4P50991 539 aaKnown RBP13.72□□□□□ -0.21
SSBP1-209ENST00000473783 LRIT3Q3SXY7 679 aa13.72□□□□□ -0.21
SSBP1-209ENST00000473783 HELBQ8NG08 1087 aaPredicted RBP13.72□□□□□ -0.21
SSBP1-209ENST00000473783 U2AF1L4Q8WU68 220 aaKnown RBP13.72□□□□□ -0.21
SSBP1-209ENST00000473783 GDF15Q99988 308 aa13.72□□□□□ -0.21
SSBP1-209ENST00000473783 RIPOR2Q9Y4F9 1068 aa13.72□□□□□ -0.21
SSBP1-209ENST00000473783 HOXD10P28358 340 aa13.71□□□□□ -0.21
SSBP1-209ENST00000473783 UBXN2AP68543 259 aa13.71□□□□□ -0.21
SSBP1-209ENST00000473783 RAET1EQ8TD07 263 aa13.71□□□□□ -0.21
SSBP1-209ENST00000473783 BSDC1Q9NW68 430 aaPredicted RBP13.71□□□□□ -0.21
SSBP1-209ENST00000473783 MINPP1Q9UNW1 487 aa13.71□□□□□ -0.21
SSBP1-209ENST00000473783 CLRN2A0PK11 232 aa13.7□□□□□ -0.22
SSBP1-209ENST00000473783 SPDYE2BA6NHP3 402 aa13.7□□□□□ -0.22
SSBP1-209ENST00000473783 PCCAP05165 728 aaPredicted RBP13.7□□□□□ -0.22
SSBP1-209ENST00000473783 SPDYE6P0CI01 402 aa13.7□□□□□ -0.22
SSBP1-209ENST00000473783 GTF2IP78347 998 aa13.7□□□□□ -0.22
SSBP1-209ENST00000473783 RASA3Q14644 834 aa13.7□□□□□ -0.22
SSBP1-209ENST00000473783 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.7□□□□□ -0.22
SSBP1-209ENST00000473783 TXNRD3Q86VQ6 643 aa13.7□□□□□ -0.22
SSBP1-209ENST00000473783 TRIM47Q96LD4 638 aa13.7□□□□□ -0.22
SSBP1-209ENST00000473783 CCDC85AQ96PX6 553 aaPredicted RBP13.7□□□□□ -0.22
SSBP1-209ENST00000473783 VEZTQ9HBM0 779 aa13.7□□□□□ -0.22
SSBP1-209ENST00000473783 DBF4Q9UBU7 674 aaPredicted RBP13.7□□□□□ -0.22
SSBP1-209ENST00000473783 LEMD3Q9Y2U8 911 aa13.7□□□□□ -0.22
SSBP1-209ENST00000473783 ARAP2Q8WZ64 1704 aa13.7□□□□□ -0.22
SSBP1-209ENST00000473783 MGAMO43451 1857 aa13.7□□□□□ -0.22
SSBP1-209ENST00000473783 MAPK8IP3Q9UPT6 1336 aa13.69□□□□□ -0.22
SSBP1-209ENST00000473783 SGPL1O95470 568 aa13.69□□□□□ -0.22
SSBP1-209ENST00000473783 CETPP11597 493 aa13.69□□□□□ -0.22
SSBP1-209ENST00000473783 TNFAIP1Q13829 316 aa13.69□□□□□ -0.22
SSBP1-209ENST00000473783 VGLL4Q14135 290 aa13.69□□□□□ -0.22
SSBP1-209ENST00000473783 HDGFL1Q5TGJ6 251 aa13.69□□□□□ -0.22
SSBP1-209ENST00000473783 CNKSR2Q8WXI2 1034 aa13.69□□□□□ -0.22
SSBP1-209ENST00000473783 HYPKQ9NX55 129 aa13.69□□□□□ -0.22
SSBP1-209ENST00000473783 OSBPP22059 807 aa13.68□□□□□ -0.22
SSBP1-209ENST00000473783 PSMC4P43686 418 aa13.68□□□□□ -0.22
SSBP1-209ENST00000473783 CFAP100Q494V2 611 aa13.68□□□□□ -0.22
SSBP1-209ENST00000473783 CCDC191Q8NCU4 936 aa13.68□□□□□ -0.22
SSBP1-209ENST00000473783 PNNQ9H307 717 aaKnown RBP13.68□□□□□ -0.22
SSBP1-209ENST00000473783 BIN2Q9UBW5 565 aaPredicted RBP13.68□□□□□ -0.22
SSBP1-209ENST00000473783 CSADQ9Y600 493 aa13.68□□□□□ -0.22
SSBP1-209ENST00000473783 SPTBN5Q9NRC6 3674 aaKnown RBP13.68□□□□□ -0.22
SSBP1-209ENST00000473783 MYPNQ86TC9 1320 aa13.67□□□□□ -0.22
SSBP1-209ENST00000473783 BTBD19C9JJ37 291 aa13.67□□□□□ -0.22
SSBP1-209ENST00000473783 HOXB7P09629 217 aa13.67□□□□□ -0.22
SSBP1-209ENST00000473783 CTGFP29279 349 aa13.67□□□□□ -0.22
SSBP1-209ENST00000473783 BCAMP50895 628 aa13.67□□□□□ -0.22
SSBP1-209ENST00000473783 MAP3K9P80192 1104 aa13.67□□□□□ -0.22
SSBP1-209ENST00000473783 C17orf99Q6UX52 265 aa13.67□□□□□ -0.22
SSBP1-209ENST00000473783 CERS5Q8N5B7 392 aa13.67□□□□□ -0.22
SSBP1-209ENST00000473783 SLAIN1Q8ND83 568 aa13.67□□□□□ -0.22
SSBP1-209ENST00000473783 PRMT6Q96LA8 375 aaPredicted RBP13.67□□□□□ -0.22
SSBP1-209ENST00000473783 PCDHAC2Q9Y5I4 1007 aa13.67□□□□□ -0.22
SSBP1-209ENST00000473783 RPTORQ8N122 1335 aa13.66□□□□□ -0.22
SSBP1-209ENST00000473783 SPDYE5A6NIY4 337 aa13.66□□□□□ -0.22
SSBP1-209ENST00000473783 FMNL1O95466 1100 aaPredicted RBP13.66□□□□□ -0.22
SSBP1-209ENST00000473783 CTSWP56202 376 aa13.66□□□□□ -0.22
SSBP1-209ENST00000473783 KRT24Q2M2I5 525 aa13.66□□□□□ -0.22
SSBP1-209ENST00000473783 RIC3Q7Z5B4 369 aa13.66□□□□□ -0.22
SSBP1-209ENST00000473783 TDHQ8IZJ6 230 aa13.66□□□□□ -0.22
SSBP1-209ENST00000473783 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.66□□□□□ -0.22
SSBP1-209ENST00000473783 UNC93B1Q9H1C4 597 aa13.66□□□□□ -0.22
SSBP1-209ENST00000473783 KLRK1P26718 216 aa13.65□□□□□ -0.22
SSBP1-209ENST00000473783 GOLGA2Q08379 1002 aa13.65□□□□□ -0.22
SSBP1-209ENST00000473783 SNAPC2Q13487 334 aa13.65□□□□□ -0.22
SSBP1-209ENST00000473783 CD209Q9NNX6 404 aa13.65□□□□□ -0.22
SSBP1-209ENST00000473783 CWC25Q9NXE8 425 aaPredicted RBP13.65□□□□□ -0.22
SSBP1-209ENST00000473783 ECM2O94769 699 aaPredicted RBP13.64□□□□□ -0.23
SSBP1-209ENST00000473783 FKBP1AP62942 108 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms