RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 TTLL12Q14166 644 aaPredicted RBP16.28■□□□□ 0.2
SHROOM3-204ENST00000473602 NBPF9Q3BBW0 867 aa16.28■□□□□ 0.2
SHROOM3-204ENST00000473602 TAF7LQ5H9L4 462 aa16.28■□□□□ 0.2
SHROOM3-204ENST00000473602 PODNQ7Z5L7 613 aa16.28■□□□□ 0.2
SHROOM3-204ENST00000473602 KAZALD1Q96I82 304 aa16.28■□□□□ 0.2
SHROOM3-204ENST00000473602 ZNF804BA4D1E1 1349 aa16.27■□□□□ 0.2
SHROOM3-204ENST00000473602 WTIPA6NIX2 430 aaPredicted RBP16.27■□□□□ 0.2
SHROOM3-204ENST00000473602 GPR25O00155 361 aa16.27■□□□□ 0.2
SHROOM3-204ENST00000473602 IPO8O15397 1037 aaKnown RBP16.27■□□□□ 0.2
SHROOM3-204ENST00000473602 TM4SF4P48230 202 aa16.27■□□□□ 0.2
SHROOM3-204ENST00000473602 MKRN3Q13064 507 aaKnown RBP16.27■□□□□ 0.2
SHROOM3-204ENST00000473602 BICC1Q9H694 974 aaKnown RBP16.27■□□□□ 0.2
SHROOM3-204ENST00000473602 AKAP11Q9UKA4 1901 aa16.27■□□□□ 0.19
SHROOM3-204ENST00000473602 ZNF646O15015 1829 aaPredicted RBP16.26■□□□□ 0.19
SHROOM3-204ENST00000473602 LDHAL6AQ6ZMR3 332 aa16.26■□□□□ 0.19
SHROOM3-204ENST00000473602 MXD3Q9BW11 206 aa16.26■□□□□ 0.19
SHROOM3-204ENST00000473602 COA1Q9GZY4 146 aa16.26■□□□□ 0.19
SHROOM3-204ENST00000473602 HDAC5Q9UQL6 1122 aa16.26■□□□□ 0.19
SHROOM3-204ENST00000473602 KCNJ4P48050 445 aa16.25■□□□□ 0.19
SHROOM3-204ENST00000473602 FBXO46Q6PJ61 603 aaPredicted RBP16.25■□□□□ 0.19
SHROOM3-204ENST00000473602 C15orf52Q6ZUT6 534 aaKnown RBP16.25■□□□□ 0.19
SHROOM3-204ENST00000473602 ANKRD44Q8N8A2 993 aa16.25■□□□□ 0.19
SHROOM3-204ENST00000473602 CNNM1Q9NRU3 951 aa16.25■□□□□ 0.19
SHROOM3-204ENST00000473602 WNT10BO00744 389 aa16.24■□□□□ 0.19
SHROOM3-204ENST00000473602 NOM1Q5C9Z4 860 aaKnown RBP16.24■□□□□ 0.19
SHROOM3-204ENST00000473602 DACT2Q5SW24 774 aa16.24■□□□□ 0.19
SHROOM3-204ENST00000473602 OGFOD1Q8N543 542 aa16.24■□□□□ 0.19
SHROOM3-204ENST00000473602 R3HDMLQ9H3Y0 253 aa16.24■□□□□ 0.19
SHROOM3-204ENST00000473602 PAPPA2Q9BXP8 1791 aa16.23■□□□□ 0.19
SHROOM3-204ENST00000473602 FKTNO75072 461 aa16.23■□□□□ 0.19
SHROOM3-204ENST00000473602 UBTFL1P0CB47 393 aaPredicted RBP16.23■□□□□ 0.19
SHROOM3-204ENST00000473602 NF2P35240 595 aa16.23■□□□□ 0.19
SHROOM3-204ENST00000473602 PTPN12Q05209 780 aaKnown RBP16.23■□□□□ 0.19
SHROOM3-204ENST00000473602 INTS3Q68E01 1043 aaKnown RBP16.23■□□□□ 0.19
SHROOM3-204ENST00000473602 FBXW7Q969H0 707 aa16.23■□□□□ 0.19
SHROOM3-204ENST00000473602 ZNF594Q96JF6 807 aaPredicted RBP16.23■□□□□ 0.19
SHROOM3-204ENST00000473602 TRIM27P14373 513 aa16.22■□□□□ 0.19
SHROOM3-204ENST00000473602 SREBF2Q12772 1141 aa16.22■□□□□ 0.19
SHROOM3-204ENST00000473602 PRKG1Q13976 671 aa16.22■□□□□ 0.19
SHROOM3-204ENST00000473602 ATF7IPQ6VMQ6 1270 aa16.22■□□□□ 0.19
SHROOM3-204ENST00000473602 MROH5Q6ZUA9 1318 aa16.21■□□□□ 0.19
SHROOM3-204ENST00000473602 MYO3BQ8WXR4 1341 aa16.21■□□□□ 0.19
SHROOM3-204ENST00000473602 IRS2Q9Y4H2 1338 aa16.21■□□□□ 0.19
SHROOM3-204ENST00000473602 TAF5LO75529 589 aa16.21■□□□□ 0.19
SHROOM3-204ENST00000473602 BCAR3O75815 825 aa16.21■□□□□ 0.19
SHROOM3-204ENST00000473602 SASH1O94885 1247 aa16.21■□□□□ 0.19
SHROOM3-204ENST00000473602 TXNRD3Q86VQ6 643 aa16.21■□□□□ 0.19
SHROOM3-204ENST00000473602 HELBQ8NG08 1087 aaPredicted RBP16.21■□□□□ 0.19
SHROOM3-204ENST00000473602 KLRK1P26718 216 aa16.2■□□□□ 0.18
SHROOM3-204ENST00000473602 UBE4AQ14139 1066 aa16.2■□□□□ 0.18
SHROOM3-204ENST00000473602 STRIP1Q5VSL9 837 aa16.2■□□□□ 0.18
SHROOM3-204ENST00000473602 ZKSCAN2Q63HK3 967 aa16.2■□□□□ 0.18
SHROOM3-204ENST00000473602 ARMC9Q7Z3E5 817 aa16.2■□□□□ 0.18
SHROOM3-204ENST00000473602 ZNF804AQ7Z570 1209 aa16.2■□□□□ 0.18
SHROOM3-204ENST00000473602 FRAT1Q92837 279 aaPredicted RBP16.2■□□□□ 0.18
SHROOM3-204ENST00000473602 CFHR5Q9BXR6 569 aa16.2■□□□□ 0.18
SHROOM3-204ENST00000473602 RIPOR2Q9Y4F9 1068 aa16.2■□□□□ 0.18
SHROOM3-204ENST00000473602 MKI67P46013 3256 aaKnown RBP16.2■□□□□ 0.18
SHROOM3-204ENST00000473602 GNAI3P08754 354 aa16.19■□□□□ 0.18
SHROOM3-204ENST00000473602 MMP14P50281 582 aa16.19■□□□□ 0.18
SHROOM3-204ENST00000473602 LDLRAD1Q5T700 205 aa16.19■□□□□ 0.18
SHROOM3-204ENST00000473602 SPRYD7Q5W111 196 aa16.19■□□□□ 0.18
SHROOM3-204ENST00000473602 PUS3Q9BZE2 481 aaKnown RBP16.19■□□□□ 0.18
SHROOM3-204ENST00000473602 CD209Q9NNX6 404 aa16.19■□□□□ 0.18
SHROOM3-204ENST00000473602 PLIN1O60240 522 aa16.18■□□□□ 0.18
SHROOM3-204ENST00000473602 TTLL5Q6EMB2 1281 aa16.18■□□□□ 0.18
SHROOM3-204ENST00000473602 MEIS3Q99687 375 aa16.18■□□□□ 0.18
SHROOM3-204ENST00000473602 FBXO3Q9UK99 471 aa16.18■□□□□ 0.18
SHROOM3-204ENST00000473602 ANGEL1Q9UNK9 670 aaKnown RBP16.18■□□□□ 0.18
SHROOM3-204ENST00000473602 FZD1Q9UP38 647 aa16.18■□□□□ 0.18
SHROOM3-204ENST00000473602 SNAP23O00161 211 aa16.17■□□□□ 0.18
SHROOM3-204ENST00000473602 ALDH1A1P00352 501 aa16.17■□□□□ 0.18
SHROOM3-204ENST00000473602 IL1R1P14778 569 aa16.17■□□□□ 0.18
SHROOM3-204ENST00000473602 RFX5P48382 616 aaPredicted RBP16.17■□□□□ 0.18
SHROOM3-204ENST00000473602 PPP4R3CPQ6ZMV5 832 aa16.17■□□□□ 0.18
SHROOM3-204ENST00000473602 APOBEC3FQ8IUX4 373 aaKnown RBP16.17■□□□□ 0.18
SHROOM3-204ENST00000473602 KIAA0825Q8IV33 1275 aa16.17■□□□□ 0.18
SHROOM3-204ENST00000473602 GCC1Q96CN9 775 aa16.17■□□□□ 0.18
SHROOM3-204ENST00000473602 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.17■□□□□ 0.18
SHROOM3-204ENST00000473602 LRRFIP2Q9Y608 721 aaKnown RBP16.17■□□□□ 0.18
SHROOM3-204ENST00000473602 ARAP2Q8WZ64 1704 aa16.16■□□□□ 0.18
SHROOM3-204ENST00000473602 PDE8BO95263 885 aa16.16■□□□□ 0.18
SHROOM3-204ENST00000473602 LRRC24Q50LG9 513 aa16.16■□□□□ 0.18
SHROOM3-204ENST00000473602 METTL24Q5JXM2 366 aa16.16■□□□□ 0.18
SHROOM3-204ENST00000473602 VGLL2Q8N8G2 317 aa16.16■□□□□ 0.18
SHROOM3-204ENST00000473602 SLC10A4Q96EP9 437 aa16.16■□□□□ 0.18
SHROOM3-204ENST00000473602 TRIM17Q9Y577 477 aa16.16■□□□□ 0.18
SHROOM3-204ENST00000473602 HTTP42858 3142 aa16.15■□□□□ 0.18
SHROOM3-204ENST00000473602 MANSC4A6NHS7 340 aaPredicted RBP16.15■□□□□ 0.18
SHROOM3-204ENST00000473602 EYA2O00167 538 aa16.15■□□□□ 0.18
SHROOM3-204ENST00000473602 INHBEP58166 350 aa16.15■□□□□ 0.18
SHROOM3-204ENST00000473602 GTF2IP78347 998 aa16.15■□□□□ 0.18
SHROOM3-204ENST00000473602 OTOP1Q7RTM1 612 aa16.15■□□□□ 0.18
SHROOM3-204ENST00000473602 IFNL1Q8IU54 200 aa16.15■□□□□ 0.18
SHROOM3-204ENST00000473602 KLHDC4Q8TBB5 520 aa16.15■□□□□ 0.18
SHROOM3-204ENST00000473602 CLUAP1Q96AJ1 413 aa16.15■□□□□ 0.18
SHROOM3-204ENST00000473602 ZBED3Q96IU2 234 aaPredicted RBP16.15■□□□□ 0.18
SHROOM3-204ENST00000473602 DEFB129Q9H1M3 183 aa16.15■□□□□ 0.18
SHROOM3-204ENST00000473602 POTEFA5A3E0 1075 aa16.14■□□□□ 0.17
SHROOM3-204ENST00000473602 CIAO1O76071 339 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms