RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 ATP2B4P23634 1241 aa8.91□□□□□ -0.98
CKS1B-205ENST00000473344 NF2P35240 595 aa8.91□□□□□ -0.98
CKS1B-205ENST00000473344 ZNF280AP59817 542 aaPredicted RBP8.91□□□□□ -0.98
CKS1B-205ENST00000473344 TTLL12Q14166 644 aaPredicted RBP8.91□□□□□ -0.98
CKS1B-205ENST00000473344 CTU1Q7Z7A3 348 aaKnown RBP8.91□□□□□ -0.98
CKS1B-205ENST00000473344 RASAL3Q86YV0 1011 aa8.91□□□□□ -0.98
CKS1B-205ENST00000473344 FBXW7Q969H0 707 aa8.91□□□□□ -0.98
CKS1B-205ENST00000473344 CDC5LQ99459 802 aaKnown RBP8.91□□□□□ -0.98
CKS1B-205ENST00000473344 PHAXQ9H814 394 aaKnown RBP8.91□□□□□ -0.98
CKS1B-205ENST00000473344 ADAMTS8Q9UP79 889 aa8.91□□□□□ -0.98
CKS1B-205ENST00000473344 TAF1P21675 1872 aa8.91□□□□□ -0.98
CKS1B-205ENST00000473344 GNAI1P63096 354 aa8.9□□□□□ -0.98
CKS1B-205ENST00000473344 DDX10Q13206 875 aaKnown RBP8.9□□□□□ -0.98
CKS1B-205ENST00000473344 PKN2Q16513 984 aaKnown RBP8.9□□□□□ -0.98
CKS1B-205ENST00000473344 JARID2Q92833 1246 aaPredicted RBP8.9□□□□□ -0.98
CKS1B-205ENST00000473344 IFT57Q9NWB7 429 aa8.9□□□□□ -0.98
CKS1B-205ENST00000473344 ZNF609O15014 1411 aa8.89□□□□□ -0.99
CKS1B-205ENST00000473344 MYO3BQ8WXR4 1341 aa8.89□□□□□ -0.99
CKS1B-205ENST00000473344 COL4A1P02462 1669 aa8.89□□□□□ -0.99
CKS1B-205ENST00000473344 UBE2Q2LH0YL09 131 aa8.89□□□□□ -0.99
CKS1B-205ENST00000473344 NEXNQ0ZGT2 675 aa8.89□□□□□ -0.99
CKS1B-205ENST00000473344 CCDC30Q5VVM6 783 aa8.89□□□□□ -0.99
CKS1B-205ENST00000473344 ANP32EQ9BTT0 268 aa8.89□□□□□ -0.99
CKS1B-205ENST00000473344 METTL22Q9BUU2 404 aaPredicted RBP8.89□□□□□ -0.99
CKS1B-205ENST00000473344 BCL11AQ9H165 835 aa8.89□□□□□ -0.99
CKS1B-205ENST00000473344 SCAF8Q9UPN6 1271 aaKnown RBP8.89□□□□□ -0.99
CKS1B-205ENST00000473344 CASP8AP2Q9UKL3 1982 aa8.89□□□□□ -0.99
CKS1B-205ENST00000473344 MED23Q9ULK4 1368 aa8.88□□□□□ -0.99
CKS1B-205ENST00000473344 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.88□□□□□ -0.99
CKS1B-205ENST00000473344 TBC1D8O95759 1140 aa8.88□□□□□ -0.99
CKS1B-205ENST00000473344 CTSWP56202 376 aa8.88□□□□□ -0.99
CKS1B-205ENST00000473344 SREBF2Q12772 1141 aa8.88□□□□□ -0.99
CKS1B-205ENST00000473344 NBPF9Q3BBW0 867 aa8.88□□□□□ -0.99
CKS1B-205ENST00000473344 PRAMEF18Q5VWM3 479 aa8.88□□□□□ -0.99
CKS1B-205ENST00000473344 MOB2Q70IA6 237 aa8.88□□□□□ -0.99
CKS1B-205ENST00000473344 ZNF296Q8WUU4 475 aaPredicted RBP8.88□□□□□ -0.99
CKS1B-205ENST00000473344 ZFP91Q96JP5 570 aaPredicted RBP8.88□□□□□ -0.99
CKS1B-205ENST00000473344 GMLQ99445 158 aa8.88□□□□□ -0.99
CKS1B-205ENST00000473344 BSDC1Q9NW68 430 aaPredicted RBP8.88□□□□□ -0.99
CKS1B-205ENST00000473344 HPS5Q9UPZ3 1129 aa8.88□□□□□ -0.99
CKS1B-205ENST00000473344 MAP3K2Q9Y2U5 619 aa8.88□□□□□ -0.99
CKS1B-205ENST00000473344 PAPPA2Q9BXP8 1791 aa8.87□□□□□ -0.99
CKS1B-205ENST00000473344 APAF1O14727 1248 aa8.87□□□□□ -0.99
CKS1B-205ENST00000473344 ZNF853P0CG23 659 aa8.87□□□□□ -0.99
CKS1B-205ENST00000473344 IGHMBP2P38935 993 aaKnown RBP8.87□□□□□ -0.99
CKS1B-205ENST00000473344 MMP14P50281 582 aa8.87□□□□□ -0.99
CKS1B-205ENST00000473344 CCT4P50991 539 aaKnown RBP8.87□□□□□ -0.99
CKS1B-205ENST00000473344 STRIP1Q5VSL9 837 aa8.87□□□□□ -0.99
CKS1B-205ENST00000473344 ARMC9Q7Z3E5 817 aa8.87□□□□□ -0.99
CKS1B-205ENST00000473344 C8orf58Q8NAV2 365 aa8.87□□□□□ -0.99
CKS1B-205ENST00000473344 STK31Q9BXU1 1019 aa8.87□□□□□ -0.99
CKS1B-205ENST00000473344 COA1Q9GZY4 146 aa8.87□□□□□ -0.99
CKS1B-205ENST00000473344 GREM2Q9H772 168 aa8.87□□□□□ -0.99
CKS1B-205ENST00000473344 MINPP1Q9UNW1 487 aa8.87□□□□□ -0.99
CKS1B-205ENST00000473344 CENPFP49454 3210 aa8.87□□□□□ -0.99
CKS1B-205ENST00000473344 PI4KAP2A4QPH2 592 aa8.86□□□□□ -0.99
CKS1B-205ENST00000473344 WNT10BO00744 389 aa8.86□□□□□ -0.99
CKS1B-205ENST00000473344 SASH1O94885 1247 aa8.86□□□□□ -0.99
CKS1B-205ENST00000473344 KCNJ4P48050 445 aa8.86□□□□□ -0.99
CKS1B-205ENST00000473344 TM4SF4P48230 202 aa8.86□□□□□ -0.99
CKS1B-205ENST00000473344 PRKG1Q13976 671 aa8.86□□□□□ -0.99
CKS1B-205ENST00000473344 DACT2Q5SW24 774 aa8.86□□□□□ -0.99
CKS1B-205ENST00000473344 PRPF38BQ5VTL8 546 aaKnown RBP8.86□□□□□ -0.99
CKS1B-205ENST00000473344 TTLL5Q6EMB2 1281 aa8.86□□□□□ -0.99
CKS1B-205ENST00000473344 KSR2Q6VAB6 950 aa8.86□□□□□ -0.99
CKS1B-205ENST00000473344 APOBEC3FQ8IUX4 373 aaKnown RBP8.86□□□□□ -0.99
CKS1B-205ENST00000473344 PI4KAP1Q8N8J0 262 aa8.86□□□□□ -0.99
CKS1B-205ENST00000473344 TTLL11Q8NHH1 800 aa8.86□□□□□ -0.99
CKS1B-205ENST00000473344 MPHOSPH8Q99549 860 aa8.86□□□□□ -0.99
CKS1B-205ENST00000473344 MXD3Q9BW11 206 aa8.86□□□□□ -0.99
CKS1B-205ENST00000473344 LEMD3Q9Y2U8 911 aa8.86□□□□□ -0.99
CKS1B-205ENST00000473344 WTIPA6NIX2 430 aaPredicted RBP8.85□□□□□ -0.99
CKS1B-205ENST00000473344 GPR25O00155 361 aa8.85□□□□□ -0.99
CKS1B-205ENST00000473344 KIAA0825Q8IV33 1275 aa8.85□□□□□ -0.99
CKS1B-205ENST00000473344 RNF25Q96BH1 459 aaPredicted RBP8.85□□□□□ -0.99
CKS1B-205ENST00000473344 ANKRD2Q9GZV1 360 aa8.85□□□□□ -0.99
CKS1B-205ENST00000473344 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.85□□□□□ -0.99
CKS1B-205ENST00000473344 ZNF804BA4D1E1 1349 aa8.84□□□□□ -0.99
CKS1B-205ENST00000473344 MKI67P46013 3256 aaKnown RBP8.84□□□□□ -0.99
CKS1B-205ENST00000473344 MYO1BO43795 1136 aa8.84□□□□□ -0.99
CKS1B-205ENST00000473344 FKTNO75072 461 aa8.84□□□□□ -0.99
CKS1B-205ENST00000473344 ALDH1A1P00352 501 aa8.84□□□□□ -0.99
CKS1B-205ENST00000473344 IGKV5-2P06315 115 aa8.84□□□□□ -0.99
CKS1B-205ENST00000473344 GTF2IP78347 998 aa8.84□□□□□ -0.99
CKS1B-205ENST00000473344 CWF19L2Q2TBE0 894 aaKnown RBP8.84□□□□□ -0.99
CKS1B-205ENST00000473344 NOM1Q5C9Z4 860 aaKnown RBP8.84□□□□□ -0.99
CKS1B-205ENST00000473344 VARS2Q5ST30 1063 aaKnown RBP8.84□□□□□ -0.99
CKS1B-205ENST00000473344 FBXO46Q6PJ61 603 aaPredicted RBP8.84□□□□□ -0.99
CKS1B-205ENST00000473344 UBE3BQ7Z3V4 1068 aa8.84□□□□□ -0.99
CKS1B-205ENST00000473344 ZNF687Q8N1G0 1237 aa8.84□□□□□ -0.99
CKS1B-205ENST00000473344 ANGEL1Q9UNK9 670 aaKnown RBP8.84□□□□□ -0.99
CKS1B-205ENST00000473344 SCN9AQ15858 1988 aa8.84□□□□□ -0.99
CKS1B-205ENST00000473344 AKAP11Q9UKA4 1901 aa8.84□□□□□ -1
CKS1B-205ENST00000473344 BRCA2P51587 3418 aa8.83□□□□□ -1
CKS1B-205ENST00000473344 NEURL1BA8MQ27 555 aa8.83□□□□□ -1
CKS1B-205ENST00000473344 PPP1R12BO60237 982 aaPredicted RBP8.83□□□□□ -1
CKS1B-205ENST00000473344 ITGA6P23229 1130 aa8.83□□□□□ -1
CKS1B-205ENST00000473344 INHBEP58166 350 aa8.83□□□□□ -1
CKS1B-205ENST00000473344 PTPN12Q05209 780 aaKnown RBP8.83□□□□□ -1
CKS1B-205ENST00000473344 DLGAP5Q15398 846 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms