RNA–Protein interactions for RNA: ENST00000473308.1

C1orf56-203, Transcript of chromosome 1 open reading frame 56, humanhuman

TSL 3

Gene C1orf56, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf56-203ENST00000473308 CST9Q5W186 159 aa11.39□□□□□ -0.59
C1orf56-203ENST00000473308 DLK2Q6UY11 383 aa11.39□□□□□ -0.59
C1orf56-203ENST00000473308 USP48Q86UV5 1035 aa11.39□□□□□ -0.59
C1orf56-203ENST00000473308 VPS37DQ86XT2 251 aa11.39□□□□□ -0.59
C1orf56-203ENST00000473308 OGFOD1Q8N543 542 aa11.39□□□□□ -0.59
C1orf56-203ENST00000473308 LPIN2Q92539 896 aa11.39□□□□□ -0.59
C1orf56-203ENST00000473308 DCPSQ96C86 337 aaKnown RBP11.39□□□□□ -0.59
C1orf56-203ENST00000473308 TRPM7Q96QT4 1865 aa11.39□□□□□ -0.59
C1orf56-203ENST00000473308 WNT10BO00744 389 aa11.38□□□□□ -0.59
C1orf56-203ENST00000473308 MS4A1P11836 297 aa11.38□□□□□ -0.59
C1orf56-203ENST00000473308 SLC5A1P13866 664 aa11.38□□□□□ -0.59
C1orf56-203ENST00000473308 ATP8B2P98198 1209 aa11.38□□□□□ -0.59
C1orf56-203ENST00000473308 POLA2Q14181 598 aa11.38□□□□□ -0.59
C1orf56-203ENST00000473308 NBPF9Q3BBW0 867 aa11.38□□□□□ -0.59
C1orf56-203ENST00000473308 ANGEL2Q5VTE6 544 aaKnown RBP11.38□□□□□ -0.59
C1orf56-203ENST00000473308 KRT26Q7Z3Y9 468 aa11.38□□□□□ -0.59
C1orf56-203ENST00000473308 ZBED3Q96IU2 234 aaPredicted RBP11.38□□□□□ -0.59
C1orf56-203ENST00000473308 C1orf115Q9H7X2 142 aa11.38□□□□□ -0.59
C1orf56-203ENST00000473308 GGA3Q9NZ52 723 aa11.38□□□□□ -0.59
C1orf56-203ENST00000473308 MKRN1Q9UHC7 482 aaKnown RBP11.38□□□□□ -0.59
C1orf56-203ENST00000473308 HDAC9Q9UKV0 1011 aa11.38□□□□□ -0.59
C1orf56-203ENST00000473308 IQSEC3Q9UPP2 1182 aaPredicted RBP11.38□□□□□ -0.59
C1orf56-203ENST00000473308 ADM5C9JUS6 153 aa11.37□□□□□ -0.59
C1orf56-203ENST00000473308 F8W031 263 aaPredicted RBP11.37□□□□□ -0.59
C1orf56-203ENST00000473308 CELF2O95319 508 aaKnown RBP11.37□□□□□ -0.59
C1orf56-203ENST00000473308 ATP2B3Q16720 1220 aa11.37□□□□□ -0.59
C1orf56-203ENST00000473308 MFSD14BQ5SR56 506 aa11.37□□□□□ -0.59
C1orf56-203ENST00000473308 JMYQ8N9B5 988 aa11.37□□□□□ -0.59
C1orf56-203ENST00000473308 SSH3Q8TE77 659 aa11.37□□□□□ -0.59
C1orf56-203ENST00000473308 CNTNAP1P78357 1384 aa11.37□□□□□ -0.59
C1orf56-203ENST00000473308 PITPNM2Q9BZ72 1349 aa11.36□□□□□ -0.59
C1orf56-203ENST00000473308 RASSF10A6NK89 507 aa11.36□□□□□ -0.59
C1orf56-203ENST00000473308 TFCP2Q12800 502 aa11.36□□□□□ -0.59
C1orf56-203ENST00000473308 CHAF1AQ13111 956 aaPredicted RBP11.36□□□□□ -0.59
C1orf56-203ENST00000473308 MVPQ14764 893 aaKnown RBP11.36□□□□□ -0.59
C1orf56-203ENST00000473308 SULF1Q8IWU6 871 aa11.36□□□□□ -0.59
C1orf56-203ENST00000473308 MTMR14Q8NCE2 650 aa11.36□□□□□ -0.59
C1orf56-203ENST00000473308 ABT1Q9ULW3 272 aaKnown RBP11.36□□□□□ -0.59
C1orf56-203ENST00000473308 PCDHAC2Q9Y5I4 1007 aa11.36□□□□□ -0.59
C1orf56-203ENST00000473308 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.36□□□□□ -0.59
C1orf56-203ENST00000473308 FRAT2O75474 233 aaPredicted RBP11.35□□□□□ -0.59
C1orf56-203ENST00000473308 ADORA1P30542 326 aa11.35□□□□□ -0.59
C1orf56-203ENST00000473308 VEGFBP49765 207 aa11.35□□□□□ -0.59
C1orf56-203ENST00000473308 TIMM10P62072 90 aa11.35□□□□□ -0.59
C1orf56-203ENST00000473308 G3BP1Q13283 466 aaKnown RBP eCLIP11.35□□□□□ -0.59
C1orf56-203ENST00000473308 GRIK5Q16478 980 aa11.35□□□□□ -0.59
C1orf56-203ENST00000473308 DEFB115Q30KQ5 88 aa11.35□□□□□ -0.59
C1orf56-203ENST00000473308 CEP85Q6P2H3 762 aa11.35□□□□□ -0.59
C1orf56-203ENST00000473308 TBC1D22AQ8WUA7 517 aa11.35□□□□□ -0.59
C1orf56-203ENST00000473308 ZNF408Q9H9D4 720 aa11.35□□□□□ -0.59
C1orf56-203ENST00000473308 SCAF8Q9UPN6 1271 aaKnown RBP11.35□□□□□ -0.59
C1orf56-203ENST00000473308 COG6Q9Y2V7 657 aa11.35□□□□□ -0.59
C1orf56-203ENST00000473308 TLL2Q9Y6L7 1015 aa11.35□□□□□ -0.59
C1orf56-203ENST00000473308 PHKA1P46020 1223 aa11.34□□□□□ -0.59
C1orf56-203ENST00000473308 DLGAP5Q15398 846 aa11.34□□□□□ -0.59
C1orf56-203ENST00000473308 CFAP100Q494V2 611 aa11.34□□□□□ -0.59
C1orf56-203ENST00000473308 C20orf194Q5TEA3 1177 aa11.34□□□□□ -0.59
C1orf56-203ENST00000473308 SAPCD2Q86UD0 394 aa11.34□□□□□ -0.59
C1orf56-203ENST00000473308 CDCA5Q96FF9 252 aa11.34□□□□□ -0.59
C1orf56-203ENST00000473308 YTHDC1Q96MU7 727 aaKnown RBP11.34□□□□□ -0.59
C1orf56-203ENST00000473308 TTF2Q9UNY4 1162 aaKnown RBP11.34□□□□□ -0.59
C1orf56-203ENST00000473308 AKAP2Q9Y2D5 859 aa11.34□□□□□ -0.59
C1orf56-203ENST00000473308 AOX1Q06278 1338 aa11.34□□□□□ -0.59
C1orf56-203ENST00000473308 COL1A1P02452 1464 aaPredicted RBP11.33□□□□□ -0.6
C1orf56-203ENST00000473308 ARAP2Q8WZ64 1704 aa11.33□□□□□ -0.6
C1orf56-203ENST00000473308 A0A1B0GUL7 405 aa11.33□□□□□ -0.6
C1orf56-203ENST00000473308 SPDYE2BA6NHP3 402 aa11.33□□□□□ -0.6
C1orf56-203ENST00000473308 ZBTB22O15209 634 aa11.33□□□□□ -0.6
C1orf56-203ENST00000473308 SPDYE6P0CI01 402 aa11.33□□□□□ -0.6
C1orf56-203ENST00000473308 PDE3AQ14432 1141 aa11.33□□□□□ -0.6
C1orf56-203ENST00000473308 CCDC102BQ68D86 513 aa11.33□□□□□ -0.6
C1orf56-203ENST00000473308 XAGE2Q96GT9 111 aa11.33□□□□□ -0.6
C1orf56-203ENST00000473308 PRMT6Q96LA8 375 aaPredicted RBP11.33□□□□□ -0.6
C1orf56-203ENST00000473308 GBA2Q9HCG7 927 aaPredicted RBP11.33□□□□□ -0.6
C1orf56-203ENST00000473308 ZBTB40Q9NUA8 1239 aa11.33□□□□□ -0.6
C1orf56-203ENST00000473308 GNL3LQ9NVN8 582 aaKnown RBP11.33□□□□□ -0.6
C1orf56-203ENST00000473308 SERPINA10Q9UK55 444 aa11.33□□□□□ -0.6
C1orf56-203ENST00000473308 DDX19BQ9UMR2 479 aa11.33□□□□□ -0.6
C1orf56-203ENST00000473308 NOP58Q9Y2X3 529 aaKnown RBP11.33□□□□□ -0.6
C1orf56-203ENST00000473308 SURF6O75683 361 aaKnown RBP11.32□□□□□ -0.6
C1orf56-203ENST00000473308 CRKP46108 304 aa11.32□□□□□ -0.6
C1orf56-203ENST00000473308 RBM5P52756 815 aaKnown RBP eCLIP11.32□□□□□ -0.6
C1orf56-203ENST00000473308 PRAMEF18Q5VWM3 479 aa11.32□□□□□ -0.6
C1orf56-203ENST00000473308 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.32□□□□□ -0.6
C1orf56-203ENST00000473308 WDR66Q8TBY9 1149 aa11.32□□□□□ -0.6
C1orf56-203ENST00000473308 MRIQ9BWK5 157 aa11.32□□□□□ -0.6
C1orf56-203ENST00000473308 SUGT1Q9Y2Z0 365 aa11.32□□□□□ -0.6
C1orf56-203ENST00000473308 WDR33Q9C0J8 1336 aaKnown RBP11.32□□□□□ -0.6
C1orf56-203ENST00000473308 MYH13Q9UKX3 1938 aa11.31□□□□□ -0.6
C1orf56-203ENST00000473308 SEMA3EO15041 775 aa11.31□□□□□ -0.6
C1orf56-203ENST00000473308 HDLBPQ00341 1268 aaKnown RBP11.31□□□□□ -0.6
C1orf56-203ENST00000473308 OS9Q13438 667 aaPredicted RBP11.31□□□□□ -0.6
C1orf56-203ENST00000473308 CYP4F22Q6NT55 531 aa11.31□□□□□ -0.6
C1orf56-203ENST00000473308 APOBEC3FQ8IUX4 373 aaKnown RBP11.31□□□□□ -0.6
C1orf56-203ENST00000473308 C2orf69Q8N8R5 385 aa11.31□□□□□ -0.6
C1orf56-203ENST00000473308 HHIPL1Q96JK4 782 aa11.31□□□□□ -0.6
C1orf56-203ENST00000473308 CAPNS2Q96L46 248 aa11.31□□□□□ -0.6
C1orf56-203ENST00000473308 NEUROD6Q96NK8 337 aa11.31□□□□□ -0.6
C1orf56-203ENST00000473308 DENND2AQ9ULE3 1009 aa11.31□□□□□ -0.6
C1orf56-203ENST00000473308 ECM29Q5VYK3 1845 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms