RNA–Protein interactions for RNA: ENST00000473118.5

TARDBP-205, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-205ENST00000473118 ITPKCQ96DU7 683 aa10.08□□□□□ -0.8
TARDBP-205ENST00000473118 ZFAND3Q9H8U3 227 aa10.08□□□□□ -0.8
TARDBP-205ENST00000473118 LRRC4BQ9NT99 713 aa10.08□□□□□ -0.8
TARDBP-205ENST00000473118 DACH1Q9UI36 760 aa10.08□□□□□ -0.8
TARDBP-205ENST00000473118 SCN7AQ01118 1682 aa10.08□□□□□ -0.8
TARDBP-205ENST00000473118 ANKRD36CQ5JPF3 1778 aa10.08□□□□□ -0.8
TARDBP-205ENST00000473118 CASZ1Q86V15 1759 aa10.08□□□□□ -0.8
TARDBP-205ENST00000473118 ARFGEF2Q9Y6D5 1785 aa10.07□□□□□ -0.8
TARDBP-205ENST00000473118 ITPK1Q13572 414 aa10.07□□□□□ -0.8
TARDBP-205ENST00000473118 KRT24Q2M2I5 525 aa10.07□□□□□ -0.8
TARDBP-205ENST00000473118 PPP1R26Q5T8A7 1209 aaPredicted RBP10.07□□□□□ -0.8
TARDBP-205ENST00000473118 TSPYL6Q8N831 410 aa10.07□□□□□ -0.8
TARDBP-205ENST00000473118 C8orf58Q8NAV2 365 aa10.07□□□□□ -0.8
TARDBP-205ENST00000473118 FMNL2Q96PY5 1086 aa10.07□□□□□ -0.8
TARDBP-205ENST00000473118 MYH16Q9H6N6 1097 aa10.07□□□□□ -0.8
TARDBP-205ENST00000473118 APBA3O96018 575 aa10.06□□□□□ -0.8
TARDBP-205ENST00000473118 TXNRD1Q16881 649 aa10.06□□□□□ -0.8
TARDBP-205ENST00000473118 SLC27A3Q5K4L6 730 aa10.06□□□□□ -0.8
TARDBP-205ENST00000473118 ZNF787Q6DD87 383 aa10.06□□□□□ -0.8
TARDBP-205ENST00000473118 ATP13A2Q9NQ11 1180 aa10.06□□□□□ -0.8
TARDBP-205ENST00000473118 PRAMEF22A3QJZ6 481 aa10.05□□□□□ -0.8
TARDBP-205ENST00000473118 PTCD1O75127 700 aaKnown RBP10.05□□□□□ -0.8
TARDBP-205ENST00000473118 VAMP4O75379 141 aa10.05□□□□□ -0.8
TARDBP-205ENST00000473118 SNRPA1P09661 255 aaKnown RBP10.05□□□□□ -0.8
TARDBP-205ENST00000473118 CYP19A1P11511 503 aaPredicted RBP10.05□□□□□ -0.8
TARDBP-205ENST00000473118 EXOSC9Q06265 439 aaKnown RBP10.05□□□□□ -0.8
TARDBP-205ENST00000473118 RNF20Q5VTR2 975 aa10.05□□□□□ -0.8
TARDBP-205ENST00000473118 LRP10Q7Z4F1 713 aa10.05□□□□□ -0.8
TARDBP-205ENST00000473118 TTC5Q8N0Z6 440 aa10.05□□□□□ -0.8
TARDBP-205ENST00000473118 LAS1LQ9Y4W2 734 aaKnown RBP10.05□□□□□ -0.8
TARDBP-205ENST00000473118 CNTNAP4Q9C0A0 1308 aa10.05□□□□□ -0.8
TARDBP-205ENST00000473118 UPP2O95045 317 aa10.04□□□□□ -0.8
TARDBP-205ENST00000473118 CT47B1P0C2W7 299 aaPredicted RBP10.04□□□□□ -0.8
TARDBP-205ENST00000473118 BMP1P13497 986 aa10.04□□□□□ -0.8
TARDBP-205ENST00000473118 SEMA3FQ13275 785 aa10.04□□□□□ -0.8
TARDBP-205ENST00000473118 DNAJC10Q8IXB1 793 aa10.04□□□□□ -0.8
TARDBP-205ENST00000473118 LINC00116Q8NCU8 138 aa10.04□□□□□ -0.8
TARDBP-205ENST00000473118 CLUAP1Q96AJ1 413 aa10.04□□□□□ -0.8
TARDBP-205ENST00000473118 TMPRSS4Q9NRS4 437 aa10.04□□□□□ -0.8
TARDBP-205ENST00000473118 USP16Q9Y5T5 823 aa10.04□□□□□ -0.8
TARDBP-205ENST00000473118 ERBB4Q15303 1308 aa10.04□□□□□ -0.8
TARDBP-205ENST00000473118 ERVH48-1M5A8F1 160 aa10.03□□□□□ -0.8
TARDBP-205ENST00000473118 BAG6P46379 1132 aa10.03□□□□□ -0.8
TARDBP-205ENST00000473118 SCARF1Q14162 830 aa10.03□□□□□ -0.8
TARDBP-205ENST00000473118 EZH2Q15910 746 aaKnown RBP10.03□□□□□ -0.8
TARDBP-205ENST00000473118 INTS5Q6P9B9 1019 aaKnown RBP10.03□□□□□ -0.8
TARDBP-205ENST00000473118 DEFB132Q7Z7B7 95 aa10.03□□□□□ -0.8
TARDBP-205ENST00000473118 KLF16Q9BXK1 252 aaPredicted RBP10.03□□□□□ -0.8
TARDBP-205ENST00000473118 TEX13AQ9BXU3 409 aaPredicted RBP10.03□□□□□ -0.8
TARDBP-205ENST00000473118 CCNL1Q9UK58 526 aaPredicted RBP10.03□□□□□ -0.8
TARDBP-205ENST00000473118 AFDNP55196 1824 aaKnown RBP10.03□□□□□ -0.8
TARDBP-205ENST00000473118 ESPNB1AK53 854 aa10.02□□□□□ -0.81
TARDBP-205ENST00000473118 KCNQ4P56696 695 aa10.02□□□□□ -0.81
TARDBP-205ENST00000473118 TWISTNBQ3B726 338 aaPredicted RBP10.02□□□□□ -0.81
TARDBP-205ENST00000473118 NBPF10Q6P3W6 841 aaKnown RBP10.02□□□□□ -0.81
TARDBP-205ENST00000473118 NBPF15Q8N660 670 aa10.02□□□□□ -0.81
TARDBP-205ENST00000473118 ZNF428Q96B54 188 aa10.02□□□□□ -0.81
TARDBP-205ENST00000473118 YTHDC1Q96MU7 727 aaKnown RBP10.02□□□□□ -0.81
TARDBP-205ENST00000473118 GMPR2Q9P2T1 348 aaKnown RBP10.02□□□□□ -0.81
TARDBP-205ENST00000473118 C6orf118Q5T5N4 469 aa10.01□□□□□ -0.81
TARDBP-205ENST00000473118 AMIGO3Q86WK7 504 aa10.01□□□□□ -0.81
TARDBP-205ENST00000473118 SENP2Q9HC62 589 aa10.01□□□□□ -0.81
TARDBP-205ENST00000473118 CEP126Q9P2H0 1117 aa10.01□□□□□ -0.81
TARDBP-205ENST00000473118 GTF3C3Q9Y5Q9 886 aa10.01□□□□□ -0.81
TARDBP-205ENST00000473118 NRXN2Q9P2S2 1712 aa10.01□□□□□ -0.81
TARDBP-205ENST00000473118 HMGB2P26583 209 aaKnown RBP10□□□□□ -0.81
TARDBP-205ENST00000473118 CRKLP46109 303 aaKnown RBP10□□□□□ -0.81
TARDBP-205ENST00000473118 EIF5P55010 431 aaKnown RBP10□□□□□ -0.81
TARDBP-205ENST00000473118 CBLBQ13191 982 aa10□□□□□ -0.81
TARDBP-205ENST00000473118 SF3B2Q13435 895 aaKnown RBP10□□□□□ -0.81
TARDBP-205ENST00000473118 SLFNL1Q499Z3 407 aa10□□□□□ -0.81
TARDBP-205ENST00000473118 MRPL14Q6P1L8 145 aaKnown RBP10□□□□□ -0.81
TARDBP-205ENST00000473118 DDX21Q9NR30 783 aaKnown RBP eCLIP10□□□□□ -0.81
TARDBP-205ENST00000473118 CCDC87Q9NVE4 849 aa10□□□□□ -0.81
TARDBP-205ENST00000473118 ZBTB1Q9Y2K1 713 aa10□□□□□ -0.81
TARDBP-205ENST00000473118 POTECB2RU33 542 aa9.99□□□□□ -0.81
TARDBP-205ENST00000473118 RPS6KA4O75676 772 aa9.99□□□□□ -0.81
TARDBP-205ENST00000473118 STARD3NLO95772 234 aa9.99□□□□□ -0.81
TARDBP-205ENST00000473118 A1BGP04217 495 aa9.99□□□□□ -0.81
TARDBP-205ENST00000473118 BMP2P12643 396 aa9.99□□□□□ -0.81
TARDBP-205ENST00000473118 SOX11P35716 441 aa9.99□□□□□ -0.81
TARDBP-205ENST00000473118 RARSP54136 660 aaKnown RBP9.99□□□□□ -0.81
TARDBP-205ENST00000473118 ZNF827Q17R98 1081 aa9.99□□□□□ -0.81
TARDBP-205ENST00000473118 PROSER3Q2NL68 480 aa9.99□□□□□ -0.81
TARDBP-205ENST00000473118 ALDH1L2Q3SY69 923 aa9.99□□□□□ -0.81
TARDBP-205ENST00000473118 HDGFL1Q5TGJ6 251 aa9.99□□□□□ -0.81
TARDBP-205ENST00000473118 TRIM46Q7Z4K8 759 aa9.99□□□□□ -0.81
TARDBP-205ENST00000473118 ZNF784Q8NCA9 323 aaPredicted RBP9.99□□□□□ -0.81
TARDBP-205ENST00000473118 PURBQ96QR8 312 aaKnown RBP9.99□□□□□ -0.81
TARDBP-205ENST00000473118 CYLDQ9NQC7 956 aa9.99□□□□□ -0.81
TARDBP-205ENST00000473118 PCDHB11Q9Y5F2 797 aa9.99□□□□□ -0.81
TARDBP-205ENST00000473118 LAMB2P55268 1798 aa9.98□□□□□ -0.81
TARDBP-205ENST00000473118 ELL2O00472 640 aaPredicted RBP9.98□□□□□ -0.81
TARDBP-205ENST00000473118 IL6STP40189 918 aaPredicted RBP9.98□□□□□ -0.81
TARDBP-205ENST00000473118 CCDC30Q5VVM6 783 aa9.98□□□□□ -0.81
TARDBP-205ENST00000473118 KIFC2Q96AC6 838 aa9.98□□□□□ -0.81
TARDBP-205ENST00000473118 CHMP4AQ9BY43 222 aa9.98□□□□□ -0.81
TARDBP-205ENST00000473118 CHPF2Q9P2E5 772 aa9.98□□□□□ -0.81
TARDBP-205ENST00000473118 DBF4Q9UBU7 674 aaPredicted RBP9.98□□□□□ -0.81
TARDBP-205ENST00000473118 KIF13BQ9NQT8 1826 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms