RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 EGFRP00533 1210 aa16.3■□□□□ 0.2
TPM3-216ENST00000473036 IL1R1P14778 569 aa16.3■□□□□ 0.2
TPM3-216ENST00000473036 MLLT1Q03111 559 aaPredicted RBP16.3■□□□□ 0.2
TPM3-216ENST00000473036 TFCP2Q12800 502 aa16.3■□□□□ 0.2
TPM3-216ENST00000473036 TNIP1Q15025 636 aa16.3■□□□□ 0.2
TPM3-216ENST00000473036 CST9Q5W186 159 aa16.3■□□□□ 0.2
TPM3-216ENST00000473036 PCDH10Q9P2E7 1040 aa16.3■□□□□ 0.2
TPM3-216ENST00000473036 ARAP2Q8WZ64 1704 aa16.3■□□□□ 0.2
TPM3-216ENST00000473036 USP17L3A6NCW0 530 aa16.29■□□□□ 0.2
TPM3-216ENST00000473036 USP17L4A6NCW7 530 aa16.29■□□□□ 0.2
TPM3-216ENST00000473036 ADORA1P30542 326 aa16.29■□□□□ 0.2
TPM3-216ENST00000473036 BCAMP50895 628 aa16.29■□□□□ 0.2
TPM3-216ENST00000473036 HIRAP54198 1017 aaPredicted RBP16.29■□□□□ 0.2
TPM3-216ENST00000473036 PUM3Q15397 648 aaKnown RBP16.29■□□□□ 0.2
TPM3-216ENST00000473036 RSBN1LQ6PCB5 846 aaPredicted RBP16.29■□□□□ 0.2
TPM3-216ENST00000473036 USP17L1Q7RTZ2 530 aa16.29■□□□□ 0.2
TPM3-216ENST00000473036 SAPCD2Q86UD0 394 aa16.29■□□□□ 0.2
TPM3-216ENST00000473036 CERS5Q8N5B7 392 aa16.29■□□□□ 0.2
TPM3-216ENST00000473036 PGAP2Q9UHJ9 254 aa16.29■□□□□ 0.2
TPM3-216ENST00000473036 JAG2Q9Y219 1238 aa16.29■□□□□ 0.2
TPM3-216ENST00000473036 NOP58Q9Y2X3 529 aaKnown RBP16.29■□□□□ 0.2
TPM3-216ENST00000473036 ZNF609O15014 1411 aa16.28■□□□□ 0.2
TPM3-216ENST00000473036 G3V3G9 751 aa16.28■□□□□ 0.2
TPM3-216ENST00000473036 DCAF8Q5TAQ9 597 aa16.28■□□□□ 0.2
TPM3-216ENST00000473036 CYP4F22Q6NT55 531 aa16.28■□□□□ 0.2
TPM3-216ENST00000473036 PAXIP1Q6ZW49 1069 aaPredicted RBP16.28■□□□□ 0.2
TPM3-216ENST00000473036 TDRD7Q8NHU6 1098 aaKnown RBP16.28■□□□□ 0.2
TPM3-216ENST00000473036 TRPM4Q8TD43 1214 aa16.28■□□□□ 0.2
TPM3-216ENST00000473036 CRBNQ96SW2 442 aa16.28■□□□□ 0.2
TPM3-216ENST00000473036 CNOT7Q9UIV1 285 aaKnown RBP16.28■□□□□ 0.2
TPM3-216ENST00000473036 HIBADHP31937 336 aaKnown RBP16.27■□□□□ 0.2
TPM3-216ENST00000473036 TIMM10P62072 90 aa16.27■□□□□ 0.2
TPM3-216ENST00000473036 GTF2IP78347 998 aa16.27■□□□□ 0.2
TPM3-216ENST00000473036 ATP2B3Q16720 1220 aa16.27■□□□□ 0.2
TPM3-216ENST00000473036 STRIP1Q5VSL9 837 aa16.27■□□□□ 0.2
TPM3-216ENST00000473036 MICALL2Q8IY33 904 aa16.27■□□□□ 0.2
TPM3-216ENST00000473036 LPIN2Q92539 896 aa16.27■□□□□ 0.2
TPM3-216ENST00000473036 DPF2Q92785 391 aa16.27■□□□□ 0.2
TPM3-216ENST00000473036 CEP126Q9P2H0 1117 aa16.27■□□□□ 0.2
TPM3-216ENST00000473036 IQSEC3Q9UPP2 1182 aaPredicted RBP16.27■□□□□ 0.2
TPM3-216ENST00000473036 COL1A1P02452 1464 aaPredicted RBP16.27■□□□□ 0.19
TPM3-216ENST00000473036 CCDC85CA6NKD9 419 aa16.26■□□□□ 0.19
TPM3-216ENST00000473036 SURF6O75683 361 aaKnown RBP16.26■□□□□ 0.19
TPM3-216ENST00000473036 GRIK5Q16478 980 aa16.26■□□□□ 0.19
TPM3-216ENST00000473036 TTLL5Q6EMB2 1281 aa16.26■□□□□ 0.19
TPM3-216ENST00000473036 SAMD7Q7Z3H4 446 aa16.26■□□□□ 0.19
TPM3-216ENST00000473036 ZNF804AQ7Z570 1209 aa16.26■□□□□ 0.19
TPM3-216ENST00000473036 SUPT16HQ9Y5B9 1047 aaKnown RBP16.26■□□□□ 0.19
TPM3-216ENST00000473036 PCDHB15Q9Y5E8 787 aa16.26■□□□□ 0.19
TPM3-216ENST00000473036 POLR2AP24928 1970 aaKnown RBP16.26■□□□□ 0.19
TPM3-216ENST00000473036 G3BP1Q13283 466 aaKnown RBP eCLIP16.25■□□□□ 0.191e-6■■■□□ 15.3
TPM3-216ENST00000473036 RPAP2Q8IXW5 612 aaPredicted RBP16.25■□□□□ 0.19
TPM3-216ENST00000473036 FBXW7Q969H0 707 aa16.25■□□□□ 0.19
TPM3-216ENST00000473036 EXOC6BQ9Y2D4 811 aa16.25■□□□□ 0.19
TPM3-216ENST00000473036 FAM205AQ6ZU69 1335 aa16.24■□□□□ 0.19
TPM3-216ENST00000473036 MYH13Q9UKX3 1938 aa16.24■□□□□ 0.19
TPM3-216ENST00000473036 A0A1B0GUL7 405 aa16.24■□□□□ 0.19
TPM3-216ENST00000473036 TRAF5O00463 557 aa16.24■□□□□ 0.19
TPM3-216ENST00000473036 SLC5A1P13866 664 aa16.24■□□□□ 0.19
TPM3-216ENST00000473036 RPS12P25398 132 aaKnown RBP16.24■□□□□ 0.19
TPM3-216ENST00000473036 PHKA1P46020 1223 aa16.24■□□□□ 0.19
TPM3-216ENST00000473036 ZNF280AP59817 542 aaPredicted RBP16.24■□□□□ 0.19
TPM3-216ENST00000473036 NOGQ13253 232 aa16.24■□□□□ 0.19
TPM3-216ENST00000473036 CDC37L1Q7L3B6 337 aa16.24■□□□□ 0.19
TPM3-216ENST00000473036 AGBL3Q8NEM8 1001 aa16.24■□□□□ 0.19
TPM3-216ENST00000473036 ASTN2O75129 1339 aaPredicted RBP16.23■□□□□ 0.19
TPM3-216ENST00000473036 CELF2O95319 508 aaKnown RBP16.23■□□□□ 0.19
TPM3-216ENST00000473036 IFIT1P09914 478 aaKnown RBP16.23■□□□□ 0.19
TPM3-216ENST00000473036 TBC1D10BQ4KMP7 808 aaPredicted RBP16.23■□□□□ 0.19
TPM3-216ENST00000473036 XAGE2Q96GT9 111 aa16.23■□□□□ 0.19
TPM3-216ENST00000473036 PCDHAC2Q9Y5I4 1007 aa16.23■□□□□ 0.19
TPM3-216ENST00000473036 AOX1Q06278 1338 aa16.21■□□□□ 0.19
TPM3-216ENST00000473036 FMR1Q06787 632 aaKnown RBP eCLIP16.21■□□□□ 0.19
TPM3-216ENST00000473036 GRM1Q13255 1194 aa16.21■□□□□ 0.19
TPM3-216ENST00000473036 TNNI3KQ59H18 835 aa16.21■□□□□ 0.19
TPM3-216ENST00000473036 CCDC102BQ68D86 513 aa16.21■□□□□ 0.19
TPM3-216ENST00000473036 DLK2Q6UY11 383 aa16.21■□□□□ 0.19
TPM3-216ENST00000473036 KIAA0825Q8IV33 1275 aa16.21■□□□□ 0.19
TPM3-216ENST00000473036 EAF2Q96CJ1 260 aaPredicted RBP16.21■□□□□ 0.19
TPM3-216ENST00000473036 TLR7Q9NYK1 1049 aaKnown RBP16.21■□□□□ 0.19
TPM3-216ENST00000473036 FPGT-TNNI3KV9GXZ4 949 aa16.21■□□□□ 0.19
TPM3-216ENST00000473036 AKAP11Q9UKA4 1901 aa16.2■□□□□ 0.18
TPM3-216ENST00000473036 H7C1D1 291 aa16.2■□□□□ 0.18
TPM3-216ENST00000473036 AOC2O75106 756 aa16.2■□□□□ 0.18
TPM3-216ENST00000473036 USP17L8P0C7I0 530 aa16.2■□□□□ 0.18
TPM3-216ENST00000473036 CAVIN4Q5BKX8 364 aa16.2■□□□□ 0.18
TPM3-216ENST00000473036 RBM26Q5T8P6 1007 aaKnown RBP16.2■□□□□ 0.18
TPM3-216ENST00000473036 MYOZ2Q9NPC6 264 aa16.2■□□□□ 0.18
TPM3-216ENST00000473036 GPR108Q9NPR9 543 aa16.2■□□□□ 0.18
TPM3-216ENST00000473036 F8W031 263 aaPredicted RBP16.19■□□□□ 0.18
TPM3-216ENST00000473036 FKBP1AP62942 108 aaKnown RBP16.19■□□□□ 0.18
TPM3-216ENST00000473036 CHAF1AQ13111 956 aaPredicted RBP16.19■□□□□ 0.18
TPM3-216ENST00000473036 OS9Q13438 667 aaPredicted RBP16.19■□□□□ 0.18
TPM3-216ENST00000473036 SCARF1Q14162 830 aa16.19■□□□□ 0.18
TPM3-216ENST00000473036 VPS37DQ86XT2 251 aa16.19■□□□□ 0.18
TPM3-216ENST00000473036 EXOC6Q8TAG9 804 aa16.19■□□□□ 0.18
TPM3-216ENST00000473036 ZBED3Q96IU2 234 aaPredicted RBP16.19■□□□□ 0.18
TPM3-216ENST00000473036 NEUROD6Q96NK8 337 aa16.19■□□□□ 0.18
TPM3-216ENST00000473036 DBNDD2Q9BQY9 259 aa16.19■□□□□ 0.18
TPM3-216ENST00000473036 GLIS2Q9BZE0 524 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms