RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 SEMA3EO15041 775 aa25.57■■□□□ 1.68
TOP3A-204ENST00000472959 MMP14P50281 582 aa25.57■■□□□ 1.68
TOP3A-204ENST00000472959 ADARB2Q9NS39 739 aaKnown RBP25.57■■□□□ 1.68
TOP3A-204ENST00000472959 IQSEC3Q9UPP2 1182 aaPredicted RBP25.57■■□□□ 1.68
TOP3A-204ENST00000472959 USP17L8P0C7I0 530 aa25.56■■□□□ 1.68
TOP3A-204ENST00000472959 PHKA1P46020 1223 aa25.56■■□□□ 1.68
TOP3A-204ENST00000472959 HDAC1Q13547 482 aaPredicted RBP25.56■■□□□ 1.68
TOP3A-204ENST00000472959 MICALL2Q8IY33 904 aa25.56■■□□□ 1.68
TOP3A-204ENST00000472959 APBB1O00213 710 aa25.55■■□□□ 1.68
TOP3A-204ENST00000472959 TOMM70O94826 608 aa25.55■■□□□ 1.68
TOP3A-204ENST00000472959 IRX6P78412 446 aaPredicted RBP25.55■■□□□ 1.68
TOP3A-204ENST00000472959 USP50Q70EL3 339 aaPredicted RBP25.55■■□□□ 1.68
TOP3A-204ENST00000472959 CLASRPQ8N2M8 674 aaKnown RBP25.55■■□□□ 1.68
TOP3A-204ENST00000472959 TBC1D22AQ8WUA7 517 aa25.55■■□□□ 1.68
TOP3A-204ENST00000472959 EAF2Q96CJ1 260 aaPredicted RBP25.55■■□□□ 1.68
TOP3A-204ENST00000472959 MXD3Q9BW11 206 aa25.55■■□□□ 1.68
TOP3A-204ENST00000472959 DENND2AQ9ULE3 1009 aa25.55■■□□□ 1.68
TOP3A-204ENST00000472959 SCN4AP35499 1836 aa25.55■■□□□ 1.68
TOP3A-204ENST00000472959 ZNF280AP59817 542 aaPredicted RBP25.54■■□□□ 1.68
TOP3A-204ENST00000472959 OGFOD1Q8N543 542 aa25.54■■□□□ 1.68
TOP3A-204ENST00000472959 LRRCC1Q9C099 1032 aa25.54■■□□□ 1.68
TOP3A-204ENST00000472959 CHAF1AQ13111 956 aaPredicted RBP25.53■■□□□ 1.68
TOP3A-204ENST00000472959 CCDC158Q5M9N0 1113 aa25.53■■□□□ 1.68
TOP3A-204ENST00000472959 MFSD14BQ5SR56 506 aa25.53■■□□□ 1.68
TOP3A-204ENST00000472959 AACSQ86V21 672 aa25.53■■□□□ 1.68
TOP3A-204ENST00000472959 CERS5Q8N5B7 392 aa25.53■■□□□ 1.68
TOP3A-204ENST00000472959 WDR66Q8TBY9 1149 aa25.53■■□□□ 1.68
TOP3A-204ENST00000472959 IL1RAPL2Q9NP60 686 aa25.53■■□□□ 1.68
TOP3A-204ENST00000472959 JAG2Q9Y219 1238 aa25.53■■□□□ 1.68
TOP3A-204ENST00000472959 UQCRFS1P1P0C7P4 283 aa25.52■■□□□ 1.68
TOP3A-204ENST00000472959 RBM46Q8TBY0 533 aaKnown RBP25.52■■□□□ 1.68
TOP3A-204ENST00000472959 DBNDD2Q9BQY9 259 aa25.52■■□□□ 1.68
TOP3A-204ENST00000472959 DBNLQ9UJU6 430 aaKnown RBP25.52■■□□□ 1.68
TOP3A-204ENST00000472959 PSME4Q14997 1843 aa25.51■■□□□ 1.67
TOP3A-204ENST00000472959 SHTN1A0MZ66 631 aa25.51■■□□□ 1.67
TOP3A-204ENST00000472959 EAPPQ56P03 285 aaPredicted RBP25.51■■□□□ 1.67
TOP3A-204ENST00000472959 LDHDQ86WU2 507 aa25.51■■□□□ 1.67
TOP3A-204ENST00000472959 CCDC8Q9H0W5 538 aaPredicted RBP25.51■■□□□ 1.67
TOP3A-204ENST00000472959 RWDD1Q9H446 243 aaPredicted RBP25.51■■□□□ 1.67
TOP3A-204ENST00000472959 HDAC9Q9UKV0 1011 aa25.51■■□□□ 1.67
TOP3A-204ENST00000472959 PDS5AQ29RF7 1337 aaKnown RBP25.51■■□□□ 1.67
TOP3A-204ENST00000472959 ARID4AP29374 1257 aaPredicted RBP25.5■■□□□ 1.67
TOP3A-204ENST00000472959 KIAA0825Q8IV33 1275 aa25.5■■□□□ 1.67
TOP3A-204ENST00000472959 ZNF512BQ96KM6 892 aaPredicted RBP25.5■■□□□ 1.67
TOP3A-204ENST00000472959 SUGT1Q9Y2Z0 365 aa25.5■■□□□ 1.67
TOP3A-204ENST00000472959 ARAP2Q8WZ64 1704 aa25.49■■□□□ 1.67
TOP3A-204ENST00000472959 IFIT2P09913 472 aaKnown RBP25.49■■□□□ 1.67
TOP3A-204ENST00000472959 RASGRF1Q13972 1273 aa25.49■■□□□ 1.67
TOP3A-204ENST00000472959 TTC39AQ5SRH9 613 aa25.49■■□□□ 1.67
TOP3A-204ENST00000472959 GCC1Q96CN9 775 aa25.49■■□□□ 1.67
TOP3A-204ENST00000472959 SAMD7Q7Z3H4 446 aa25.48■■□□□ 1.67
TOP3A-204ENST00000472959 MYOZ2Q9NPC6 264 aa25.48■■□□□ 1.67
TOP3A-204ENST00000472959 TLR7Q9NYK1 1049 aaKnown RBP25.48■■□□□ 1.67
TOP3A-204ENST00000472959 SALL1Q9NSC2 1324 aa25.47■■□□□ 1.67
TOP3A-204ENST00000472959 KIF4BQ2VIQ3 1234 aa25.47■■□□□ 1.67
TOP3A-204ENST00000472959 TBC1D10BQ4KMP7 808 aaPredicted RBP25.47■■□□□ 1.67
TOP3A-204ENST00000472959 ZGPATQ8N5A5 531 aaKnown RBP25.47■■□□□ 1.67
TOP3A-204ENST00000472959 SMC1BQ8NDV3 1235 aa25.47■■□□□ 1.67
TOP3A-204ENST00000472959 TRPM4Q8TD43 1214 aa25.47■■□□□ 1.67
TOP3A-204ENST00000472959 ZC3H15Q8WU90 426 aaKnown RBP25.47■■□□□ 1.67
TOP3A-204ENST00000472959 CLEC11AQ9Y240 323 aa25.47■■□□□ 1.67
TOP3A-204ENST00000472959 FSTL1Q12841 308 aa25.46■■□□□ 1.67
TOP3A-204ENST00000472959 RBM26Q5T8P6 1007 aaKnown RBP25.46■■□□□ 1.67
TOP3A-204ENST00000472959 CHADLQ6NUI6 762 aa25.46■■□□□ 1.67
TOP3A-204ENST00000472959 SPATA5Q8NB90 893 aa25.46■■□□□ 1.67
TOP3A-204ENST00000472959 HMG20BQ9P0W2 317 aa25.46■■□□□ 1.67
TOP3A-204ENST00000472959 COL1A1P02452 1464 aaPredicted RBP25.46■■□□□ 1.67
TOP3A-204ENST00000472959 F8W031 263 aaPredicted RBP25.45■■□□□ 1.66
TOP3A-204ENST00000472959 POTEIP0CG38 1075 aa25.45■■□□□ 1.66
TOP3A-204ENST00000472959 POTEJP0CG39 1038 aa25.45■■□□□ 1.66
TOP3A-204ENST00000472959 HIRAP54198 1017 aaPredicted RBP25.45■■□□□ 1.66
TOP3A-204ENST00000472959 TTF2Q9UNY4 1162 aaKnown RBP25.45■■□□□ 1.66
TOP3A-204ENST00000472959 ZNF646O15015 1829 aaPredicted RBP25.44■■□□□ 1.66
TOP3A-204ENST00000472959 MCAMP43121 646 aa25.44■■□□□ 1.66
TOP3A-204ENST00000472959 PGAP2Q9UHJ9 254 aa25.44■■□□□ 1.66
TOP3A-204ENST00000472959 MAST3O60307 1309 aa25.43■■□□□ 1.66
TOP3A-204ENST00000472959 SMARCA5O60264 1052 aaPredicted RBP25.43■■□□□ 1.66
TOP3A-204ENST00000472959 EGFRP00533 1210 aa25.43■■□□□ 1.66
TOP3A-204ENST00000472959 HDLBPQ00341 1268 aaKnown RBP25.43■■□□□ 1.66
TOP3A-204ENST00000472959 MTMR14Q8NCE2 650 aa25.43■■□□□ 1.66
TOP3A-204ENST00000472959 MRIQ9BWK5 157 aa25.43■■□□□ 1.66
TOP3A-204ENST00000472959 BCL11AQ9H165 835 aa25.43■■□□□ 1.66
TOP3A-204ENST00000472959 ZBTB47Q9UFB7 747 aaPredicted RBP25.43■■□□□ 1.66
TOP3A-204ENST00000472959 SERPINA10Q9UK55 444 aa25.43■■□□□ 1.66
TOP3A-204ENST00000472959 SCARF1Q14162 830 aa25.42■■□□□ 1.66
TOP3A-204ENST00000472959 SPTY2D1Q68D10 685 aaPredicted RBP25.42■■□□□ 1.66
TOP3A-204ENST00000472959 IGHDP01880 384 aa25.41■■□□□ 1.66
TOP3A-204ENST00000472959 LDHBP07195 334 aaKnown RBP25.41■■□□□ 1.66
TOP3A-204ENST00000472959 DLGAP5Q15398 846 aa25.41■■□□□ 1.66
TOP3A-204ENST00000472959 GRIK5Q16478 980 aa25.41■■□□□ 1.66
TOP3A-204ENST00000472959 SMC5Q8IY18 1101 aa25.41■■□□□ 1.66
TOP3A-204ENST00000472959 PI16Q6UXB8 463 aa25.4■■□□□ 1.66
TOP3A-204ENST00000472959 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.4■■□□□ 1.66
TOP3A-204ENST00000472959 ZBED3Q96IU2 234 aaPredicted RBP25.4■■□□□ 1.66
TOP3A-204ENST00000472959 WNT10BO00744 389 aa25.39■■□□□ 1.66
TOP3A-204ENST00000472959 C1QTNF8P60827 252 aa25.39■■□□□ 1.66
TOP3A-204ENST00000472959 CFAP100Q494V2 611 aa25.39■■□□□ 1.66
TOP3A-204ENST00000472959 ANKRD45Q5TZF3 282 aa25.39■■□□□ 1.66
TOP3A-204ENST00000472959 TEKT1Q969V4 418 aa25.39■■□□□ 1.66
TOP3A-204ENST00000472959 ABCF2Q9UG63 623 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms