RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 ALDH1L2Q3SY69 923 aa19.29■□□□□ 0.68
VTI1A-203ENST00000472892 CERS5Q8N5B7 392 aa19.29■□□□□ 0.68
VTI1A-203ENST00000472892 SASH1O94885 1247 aa19.28■□□□□ 0.68
VTI1A-203ENST00000472892 SLC10A3P09131 477 aa19.28■□□□□ 0.68
VTI1A-203ENST00000472892 FKBP1AP62942 108 aaKnown RBP19.28■□□□□ 0.68
VTI1A-203ENST00000472892 KIF23Q02241 960 aaPredicted RBP19.28■□□□□ 0.68
VTI1A-203ENST00000472892 UBE4AQ14139 1066 aa19.28■□□□□ 0.68
VTI1A-203ENST00000472892 PRAMEF18Q5VWM3 479 aa19.28■□□□□ 0.68
VTI1A-203ENST00000472892 PUS3Q9BZE2 481 aaKnown RBP19.28■□□□□ 0.68
VTI1A-203ENST00000472892 BICC1Q9H694 974 aaKnown RBP19.28■□□□□ 0.68
VTI1A-203ENST00000472892 RIPOR2Q9Y4F9 1068 aa19.28■□□□□ 0.68
VTI1A-203ENST00000472892 CCER2I3L3R5 266 aa19.27■□□□□ 0.68
VTI1A-203ENST00000472892 ANKRD44Q8N8A2 993 aa19.27■□□□□ 0.68
VTI1A-203ENST00000472892 MTMR14Q8NCE2 650 aa19.27■□□□□ 0.68
VTI1A-203ENST00000472892 USP44Q9H0E7 712 aa19.27■□□□□ 0.68
VTI1A-203ENST00000472892 A0A1B0GUL6 1792 aa19.26■□□□□ 0.67
VTI1A-203ENST00000472892 MROH5Q6ZUA9 1318 aa19.25■□□□□ 0.67
VTI1A-203ENST00000472892 DLGAP5Q15398 846 aa19.25■□□□□ 0.67
VTI1A-203ENST00000472892 MOB2Q70IA6 237 aa19.25■□□□□ 0.67
VTI1A-203ENST00000472892 APOBEC3FQ8IUX4 373 aaKnown RBP19.25■□□□□ 0.67
VTI1A-203ENST00000472892 TDRD7Q8NHU6 1098 aaKnown RBP19.25■□□□□ 0.67
VTI1A-203ENST00000472892 FAM84BQ96KN1 310 aaPredicted RBP19.25■□□□□ 0.67
VTI1A-203ENST00000472892 CSRNP1Q96S65 589 aa19.25■□□□□ 0.67
VTI1A-203ENST00000472892 FAM205AQ6ZU69 1335 aa19.25■□□□□ 0.67
VTI1A-203ENST00000472892 UBE2Q2LH0YL09 131 aa19.24■□□□□ 0.67
VTI1A-203ENST00000472892 CT47B1P0C2W7 299 aaPredicted RBP19.24■□□□□ 0.67
VTI1A-203ENST00000472892 RASAL3Q86YV0 1011 aa19.24■□□□□ 0.67
VTI1A-203ENST00000472892 REM2Q8IYK8 340 aaPredicted RBP19.24■□□□□ 0.67
VTI1A-203ENST00000472892 SAGE1Q9NXZ1 904 aa19.24■□□□□ 0.67
VTI1A-203ENST00000472892 PAPPA2Q9BXP8 1791 aa19.24■□□□□ 0.67
VTI1A-203ENST00000472892 HIBADHP31937 336 aaKnown RBP19.23■□□□□ 0.67
VTI1A-203ENST00000472892 GYG1P46976 350 aa19.23■□□□□ 0.67
VTI1A-203ENST00000472892 ABHD8Q96I13 439 aa19.23■□□□□ 0.67
VTI1A-203ENST00000472892 RNF186Q9NXI6 227 aa19.23■□□□□ 0.67
VTI1A-203ENST00000472892 F8W031 263 aaPredicted RBP19.22■□□□□ 0.67
VTI1A-203ENST00000472892 NF2P35240 595 aa19.22■□□□□ 0.67
VTI1A-203ENST00000472892 LRRC24Q50LG9 513 aa19.22■□□□□ 0.67
VTI1A-203ENST00000472892 PRMT6Q96LA8 375 aaPredicted RBP19.22■□□□□ 0.67
VTI1A-203ENST00000472892 SMC4Q9NTJ3 1288 aa19.22■□□□□ 0.67
VTI1A-203ENST00000472892 JAG2Q9Y219 1238 aa19.22■□□□□ 0.67
VTI1A-203ENST00000472892 SPDYE2BA6NHP3 402 aa19.21■□□□□ 0.67
VTI1A-203ENST00000472892 SPDYE6P0CI01 402 aa19.21■□□□□ 0.67
VTI1A-203ENST00000472892 TTLL12Q14166 644 aaPredicted RBP19.21■□□□□ 0.67
VTI1A-203ENST00000472892 CFAP100Q494V2 611 aa19.21■□□□□ 0.67
VTI1A-203ENST00000472892 FBXO33Q7Z6M2 555 aa19.21■□□□□ 0.67
VTI1A-203ENST00000472892 VGLL2Q8N8G2 317 aa19.21■□□□□ 0.67
VTI1A-203ENST00000472892 DEFB129Q9H1M3 183 aa19.21■□□□□ 0.67
VTI1A-203ENST00000472892 PCDHAC2Q9Y5I4 1007 aa19.21■□□□□ 0.67
VTI1A-203ENST00000472892 U3KPZ7 1027 aaPredicted RBP19.21■□□□□ 0.67
VTI1A-203ENST00000472892 PDE8BO95263 885 aa19.2■□□□□ 0.66
VTI1A-203ENST00000472892 MYO1BO43795 1136 aa19.19■□□□□ 0.66
VTI1A-203ENST00000472892 TRPA1O75762 1119 aa19.19■□□□□ 0.66
VTI1A-203ENST00000472892 METTL24Q5JXM2 366 aa19.19■□□□□ 0.66
VTI1A-203ENST00000472892 MFSD14BQ5SR56 506 aa19.19■□□□□ 0.66
VTI1A-203ENST00000472892 LDLRAD1Q5T700 205 aa19.19■□□□□ 0.66
VTI1A-203ENST00000472892 ARMC9Q7Z3E5 817 aa19.19■□□□□ 0.66
VTI1A-203ENST00000472892 KLHDC4Q8TBB5 520 aa19.19■□□□□ 0.66
VTI1A-203ENST00000472892 NOB1Q9ULX3 412 aaKnown RBP19.19■□□□□ 0.66
VTI1A-203ENST00000472892 COL1A1P02452 1464 aaPredicted RBP19.18■□□□□ 0.66
VTI1A-203ENST00000472892 RFX5P48382 616 aaPredicted RBP19.18■□□□□ 0.66
VTI1A-203ENST00000472892 PTPN12Q05209 780 aaKnown RBP19.18■□□□□ 0.66
VTI1A-203ENST00000472892 PPP2R3BQ9Y5P8 575 aa19.18■□□□□ 0.66
VTI1A-203ENST00000472892 RBM5P52756 815 aaKnown RBP eCLIP19.17■□□□□ 0.66
VTI1A-203ENST00000472892 CAVIN4Q5BKX8 364 aa19.17■□□□□ 0.66
VTI1A-203ENST00000472892 SERPINA10Q9UK55 444 aa19.17■□□□□ 0.66
VTI1A-203ENST00000472892 TTF2Q9UNY4 1162 aaKnown RBP19.17■□□□□ 0.66
VTI1A-203ENST00000472892 AOX1Q06278 1338 aa19.17■□□□□ 0.66
VTI1A-203ENST00000472892 CLRN2A0PK11 232 aa19.16■□□□□ 0.66
VTI1A-203ENST00000472892 TM4SF4P48230 202 aa19.16■□□□□ 0.66
VTI1A-203ENST00000472892 PRKG1Q13976 671 aa19.16■□□□□ 0.66
VTI1A-203ENST00000472892 MAP3K11Q16584 847 aa19.16■□□□□ 0.66
VTI1A-203ENST00000472892 VPS37DQ86XT2 251 aa19.16■□□□□ 0.66
VTI1A-203ENST00000472892 API5Q9BZZ5 524 aaKnown RBP19.16■□□□□ 0.66
VTI1A-203ENST00000472892 MCOLN1Q9GZU1 580 aa19.16■□□□□ 0.66
VTI1A-203ENST00000472892 CASP8AP2Q9UKL3 1982 aa19.15■□□□□ 0.66
VTI1A-203ENST00000472892 EYA2O00167 538 aa19.15■□□□□ 0.66
VTI1A-203ENST00000472892 FGFR2P21802 821 aa19.15■□□□□ 0.66
VTI1A-203ENST00000472892 SUPT20HL1Q3ZLR7 823 aa19.15■□□□□ 0.66
VTI1A-203ENST00000472892 ANGEL1Q9UNK9 670 aaKnown RBP19.15■□□□□ 0.66
VTI1A-203ENST00000472892 BCAMP50895 628 aa19.14■□□□□ 0.65
VTI1A-203ENST00000472892 RARSP54136 660 aaKnown RBP19.14■□□□□ 0.65
VTI1A-203ENST00000472892 DGKZQ13574 1117 aa19.14■□□□□ 0.65
VTI1A-203ENST00000472892 PUM3Q15397 648 aaKnown RBP19.14■□□□□ 0.65
VTI1A-203ENST00000472892 VEZTQ9HBM0 779 aa19.14■□□□□ 0.65
VTI1A-203ENST00000472892 IQSEC3Q9UPP2 1182 aaPredicted RBP19.14■□□□□ 0.65
VTI1A-203ENST00000472892 KIF16BQ96L93 1317 aa19.14■□□□□ 0.65
VTI1A-203ENST00000472892 UNCXA6NJT0 531 aa19.13■□□□□ 0.65
VTI1A-203ENST00000472892 PPP1R12BO60237 982 aaPredicted RBP19.13■□□□□ 0.65
VTI1A-203ENST00000472892 IFIT1P09914 478 aaKnown RBP19.13■□□□□ 0.65
VTI1A-203ENST00000472892 UBTFL1P0CB47 393 aaPredicted RBP19.13■□□□□ 0.65
VTI1A-203ENST00000472892 HDLBPQ00341 1268 aaKnown RBP19.13■□□□□ 0.65
VTI1A-203ENST00000472892 RASA3Q14644 834 aa19.13■□□□□ 0.65
VTI1A-203ENST00000472892 GRIK5Q16478 980 aa19.13■□□□□ 0.65
VTI1A-203ENST00000472892 SPDYE2Q495Y8 402 aa19.13■□□□□ 0.65
VTI1A-203ENST00000472892 NBPF12Q5TAG4 269 aaPredicted RBP19.13■□□□□ 0.65
VTI1A-203ENST00000472892 ATG9AQ7Z3C6 839 aa19.13■□□□□ 0.65
VTI1A-203ENST00000472892 DZIP1LQ8IYY4 767 aaKnown RBP19.13■□□□□ 0.65
VTI1A-203ENST00000472892 TBC1D22AQ8WUA7 517 aa19.13■□□□□ 0.65
VTI1A-203ENST00000472892 ARHGAP45Q92619 1136 aa19.13■□□□□ 0.65
VTI1A-203ENST00000472892 ZNF70Q9UC06 446 aaPredicted RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms