RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 ERICH6BQ5W0A0 696 aa24.52■■□□□ 1.52
SF1-213ENST00000472725 AACSQ86V21 672 aa24.52■■□□□ 1.52
SF1-213ENST00000472725 SMC5Q8IY18 1101 aa24.52■■□□□ 1.52
SF1-213ENST00000472725 GPBP1L1Q9HC44 474 aaPredicted RBP24.52■■□□□ 1.52
SF1-213ENST00000472725 IL1RAPL2Q9NP60 686 aa24.52■■□□□ 1.52
SF1-213ENST00000472725 IFIT2P09913 472 aaKnown RBP24.51■■□□□ 1.51
SF1-213ENST00000472725 VEGFAP15692 232 aaPredicted RBP24.51■■□□□ 1.51
SF1-213ENST00000472725 ARID4AP29374 1257 aaPredicted RBP24.51■■□□□ 1.51
SF1-213ENST00000472725 LMOD1P29536 600 aaPredicted RBP24.51■■□□□ 1.51
SF1-213ENST00000472725 DBNDD2Q9BQY9 259 aa24.51■■□□□ 1.51
SF1-213ENST00000472725 ZBTB47Q9UFB7 747 aaPredicted RBP24.51■■□□□ 1.51
SF1-213ENST00000472725 DBNLQ9UJU6 430 aaKnown RBP24.51■■□□□ 1.51
SF1-213ENST00000472725 ZNF784Q8NCA9 323 aaPredicted RBP24.5■■□□□ 1.51
SF1-213ENST00000472725 WDR66Q8TBY9 1149 aa24.5■■□□□ 1.51
SF1-213ENST00000472725 GMLQ99445 158 aa24.5■■□□□ 1.51
SF1-213ENST00000472725 GMPSP49915 693 aaPredicted RBP24.49■■□□□ 1.51
SF1-213ENST00000472725 SCNN1DP51172 638 aa24.49■■□□□ 1.51
SF1-213ENST00000472725 CCDC8Q9H0W5 538 aaPredicted RBP24.49■■□□□ 1.51
SF1-213ENST00000472725 GPRC5DQ9NZD1 345 aa24.49■■□□□ 1.51
SF1-213ENST00000472725 HACL1Q9UJ83 578 aa24.49■■□□□ 1.51
SF1-213ENST00000472725 SUGT1Q9Y2Z0 365 aa24.49■■□□□ 1.51
SF1-213ENST00000472725 IGHDP01880 384 aa24.48■■□□□ 1.51
SF1-213ENST00000472725 TTC39AQ5SRH9 613 aa24.48■■□□□ 1.51
SF1-213ENST00000472725 FBXW7Q969H0 707 aa24.48■■□□□ 1.51
SF1-213ENST00000472725 SALL1Q9NSC2 1324 aa24.47■■□□□ 1.51
SF1-213ENST00000472725 ZGPATQ8N5A5 531 aaKnown RBP24.47■■□□□ 1.51
SF1-213ENST00000472725 IQSEC3Q9UPP2 1182 aaPredicted RBP24.47■■□□□ 1.51
SF1-213ENST00000472725 ZBTB12Q9Y330 459 aaPredicted RBP24.47■■□□□ 1.51
SF1-213ENST00000472725 POTECB2RU33 542 aa24.46■■□□□ 1.51
SF1-213ENST00000472725 H7C1D1 291 aa24.46■■□□□ 1.51
SF1-213ENST00000472725 IGSF3O75054 1194 aa24.46■■□□□ 1.51
SF1-213ENST00000472725 MFSD14BQ5SR56 506 aa24.46■■□□□ 1.51
SF1-213ENST00000472725 ZNF526Q8TF50 670 aaPredicted RBP24.46■■□□□ 1.51
SF1-213ENST00000472725 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.46■■□□□ 1.51
SF1-213ENST00000472725 RRAGCQ9HB90 399 aa24.46■■□□□ 1.51
SF1-213ENST00000472725 CNOT7Q9UIV1 285 aaKnown RBP24.46■■□□□ 1.51
SF1-213ENST00000472725 USP17L8P0C7I0 530 aa24.45■■□□□ 1.5
SF1-213ENST00000472725 RASGRF1Q13972 1273 aa24.45■■□□□ 1.5
SF1-213ENST00000472725 OGFOD1Q8N543 542 aa24.45■■□□□ 1.5
SF1-213ENST00000472725 NMRK2Q9NPI5 230 aa24.45■■□□□ 1.5
SF1-213ENST00000472725 TLR7Q9NYK1 1049 aaKnown RBP24.45■■□□□ 1.5
SF1-213ENST00000472725 HDAC9Q9UKV0 1011 aa24.45■■□□□ 1.5
SF1-213ENST00000472725 SMARCA5O60264 1052 aaPredicted RBP24.44■■□□□ 1.5
SF1-213ENST00000472725 ZNF280AP59817 542 aaPredicted RBP24.44■■□□□ 1.5
SF1-213ENST00000472725 CHAF1AQ13111 956 aaPredicted RBP24.44■■□□□ 1.5
SF1-213ENST00000472725 ANKRD45Q5TZF3 282 aa24.44■■□□□ 1.5
SF1-213ENST00000472725 PNMA8AQ86V59 439 aaPredicted RBP24.44■■□□□ 1.5
SF1-213ENST00000472725 SPATA5Q8NB90 893 aa24.44■■□□□ 1.5
SF1-213ENST00000472725 ADARB2Q9NS39 739 aaKnown RBP24.44■■□□□ 1.5
SF1-213ENST00000472725 AKAP11Q9UKA4 1901 aa24.43■■□□□ 1.5
SF1-213ENST00000472725 EPHX2P34913 555 aa24.43■■□□□ 1.5
SF1-213ENST00000472725 USP50Q70EL3 339 aaPredicted RBP24.43■■□□□ 1.5
SF1-213ENST00000472725 MICALL2Q8IY33 904 aa24.43■■□□□ 1.5
SF1-213ENST00000472725 CERS5Q8N5B7 392 aa24.43■■□□□ 1.5
SF1-213ENST00000472725 GPATCH3Q96I76 525 aa24.43■■□□□ 1.5
SF1-213ENST00000472725 TAF1DQ9H5J8 278 aaPredicted RBP24.43■■□□□ 1.5
SF1-213ENST00000472725 HMG20BQ9P0W2 317 aa24.43■■□□□ 1.5
SF1-213ENST00000472725 COL1A1P02452 1464 aaPredicted RBP24.43■■□□□ 1.5
SF1-213ENST00000472725 MAST3O60307 1309 aa24.42■■□□□ 1.5
SF1-213ENST00000472725 EPS15P42566 896 aa24.42■■□□□ 1.5
SF1-213ENST00000472725 MCAMP43121 646 aa24.42■■□□□ 1.5
SF1-213ENST00000472725 MRIQ9BWK5 157 aa24.42■■□□□ 1.5
SF1-213ENST00000472725 HDLBPQ00341 1268 aaKnown RBP24.41■■□□□ 1.5
SF1-213ENST00000472725 NUCB1Q02818 461 aa24.41■■□□□ 1.5
SF1-213ENST00000472725 SPTY2D1Q68D10 685 aaPredicted RBP24.41■■□□□ 1.5
SF1-213ENST00000472725 ATP5JP18859 108 aa24.4■■□□□ 1.5
SF1-213ENST00000472725 KIAA0825Q8IV33 1275 aa24.4■■□□□ 1.5
SF1-213ENST00000472725 MXD3Q9BW11 206 aa24.4■■□□□ 1.5
SF1-213ENST00000472725 ECHDC1Q9NTX5 307 aa24.4■■□□□ 1.5
SF1-213ENST00000472725 JAG2Q9Y219 1238 aa24.4■■□□□ 1.5
SF1-213ENST00000472725 TTC41PQ6P2S7 1318 aa24.39■■□□□ 1.5
SF1-213ENST00000472725 KIF3CO14782 793 aa24.39■■□□□ 1.49
SF1-213ENST00000472725 CHD1LQ86WJ1 897 aa24.39■■□□□ 1.49
SF1-213ENST00000472725 SCARF1Q14162 830 aa24.38■■□□□ 1.49
SF1-213ENST00000472725 C16orf71Q8IYS4 520 aaPredicted RBP24.38■■□□□ 1.49
SF1-213ENST00000472725 MTMR14Q8NCE2 650 aa24.38■■□□□ 1.49
SF1-213ENST00000472725 SERPINA10Q9UK55 444 aa24.38■■□□□ 1.49
SF1-213ENST00000472725 LDHBP07195 334 aaKnown RBP24.37■■□□□ 1.49
SF1-213ENST00000472725 TMED8Q6PL24 325 aaPredicted RBP24.37■■□□□ 1.49
SF1-213ENST00000472725 ZC3H15Q8WU90 426 aaKnown RBP24.37■■□□□ 1.49
SF1-213ENST00000472725 MYOZ2Q9NPC6 264 aa24.37■■□□□ 1.49
SF1-213ENST00000472725 TTF2Q9UNY4 1162 aaKnown RBP24.37■■□□□ 1.49
SF1-213ENST00000472725 ERC2O15083 957 aa24.36■■□□□ 1.49
SF1-213ENST00000472725 TTF1Q15361 905 aaPredicted RBP24.36■■□□□ 1.49
SF1-213ENST00000472725 B4GALNT3Q6L9W6 998 aa24.36■■□□□ 1.49
SF1-213ENST00000472725 CENPQQ7L2Z9 268 aaPredicted RBP24.36■■□□□ 1.49
SF1-213ENST00000472725 ADAMTSL1Q8N6G6 1762 aa24.35■■□□□ 1.49
SF1-213ENST00000472725 MX1P20591 662 aa24.35■■□□□ 1.49
SF1-213ENST00000472725 KIF4BQ2VIQ3 1234 aa24.35■■□□□ 1.49
SF1-213ENST00000472725 ERICH6Q7L0X2 663 aa24.35■■□□□ 1.49
SF1-213ENST00000472725 LDHDQ86WU2 507 aa24.35■■□□□ 1.49
SF1-213ENST00000472725 SLF2Q8IX21 1173 aa24.35■■□□□ 1.49
SF1-213ENST00000472725 BCL11AQ9H165 835 aa24.35■■□□□ 1.49
SF1-213ENST00000472725 ABCF2Q9UG63 623 aa24.35■■□□□ 1.49
SF1-213ENST00000472725 SALL3Q9BXA9 1300 aa24.35■■□□□ 1.49
SF1-213ENST00000472725 TOMM70O94826 608 aa24.34■■□□□ 1.49
SF1-213ENST00000472725 CYP2E1P05181 493 aaPredicted RBP24.34■■□□□ 1.49
SF1-213ENST00000472725 ZAP70P43403 619 aa24.34■■□□□ 1.49
SF1-213ENST00000472725 HHIPL2Q6UWX4 724 aa24.34■■□□□ 1.49
SF1-213ENST00000472725 PI16Q6UXB8 463 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms