RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 ZC3H15Q8WU90 426 aaKnown RBP17.53■□□□□ 0.4
BRCA1-211ENST00000472490 FAM205AQ6ZU69 1335 aa17.52■□□□□ 0.4
BRCA1-211ENST00000472490 A0A1B0GUL7 405 aa17.52■□□□□ 0.4
BRCA1-211ENST00000472490 BCAMP50895 628 aa17.52■□□□□ 0.4
BRCA1-211ENST00000472490 ZNF280AP59817 542 aaPredicted RBP17.52■□□□□ 0.4
BRCA1-211ENST00000472490 AAMPQ13685 434 aa17.52■□□□□ 0.4
BRCA1-211ENST00000472490 TBC1D22AQ8WUA7 517 aa17.52■□□□□ 0.4
BRCA1-211ENST00000472490 GMLQ99445 158 aa17.52■□□□□ 0.4
BRCA1-211ENST00000472490 GPR108Q9NPR9 543 aa17.52■□□□□ 0.4
BRCA1-211ENST00000472490 SEMA3EO15041 775 aa17.51■□□□□ 0.39
BRCA1-211ENST00000472490 TIMM10P62072 90 aa17.51■□□□□ 0.39
BRCA1-211ENST00000472490 GORABQ5T7V8 394 aa17.51■□□□□ 0.39
BRCA1-211ENST00000472490 NEUROD6Q96NK8 337 aa17.51■□□□□ 0.39
BRCA1-211ENST00000472490 KIF4BQ2VIQ3 1234 aa17.5■□□□□ 0.39
BRCA1-211ENST00000472490 MFSD14BQ5SR56 506 aa17.5■□□□□ 0.39
BRCA1-211ENST00000472490 A0A1B0GUL6 1792 aa17.5■□□□□ 0.39
BRCA1-211ENST00000472490 ZBTB22O15209 634 aa17.49■□□□□ 0.39
BRCA1-211ENST00000472490 RAB11FIP3O75154 756 aa17.49■□□□□ 0.39
BRCA1-211ENST00000472490 POTEIP0CG38 1075 aa17.49■□□□□ 0.39
BRCA1-211ENST00000472490 POTEJP0CG39 1038 aa17.49■□□□□ 0.39
BRCA1-211ENST00000472490 TBC1D10BQ4KMP7 808 aaPredicted RBP17.49■□□□□ 0.39
BRCA1-211ENST00000472490 RBM26Q5T8P6 1007 aaKnown RBP17.49■□□□□ 0.39
BRCA1-211ENST00000472490 CCDC102BQ68D86 513 aa17.49■□□□□ 0.39
BRCA1-211ENST00000472490 SAMD7Q7Z3H4 446 aa17.49■□□□□ 0.39
BRCA1-211ENST00000472490 KIAA0825Q8IV33 1275 aa17.49■□□□□ 0.39
BRCA1-211ENST00000472490 XAGE2Q96GT9 111 aa17.49■□□□□ 0.39
BRCA1-211ENST00000472490 MYOZ2Q9NPC6 264 aa17.49■□□□□ 0.39
BRCA1-211ENST00000472490 DENND2AQ9ULE3 1009 aa17.49■□□□□ 0.39
BRCA1-211ENST00000472490 SUPT16HQ9Y5B9 1047 aaKnown RBP17.49■□□□□ 0.39
BRCA1-211ENST00000472490 CHAF1AQ13111 956 aaPredicted RBP17.48■□□□□ 0.39
BRCA1-211ENST00000472490 TNNI3KQ59H18 835 aa17.48■□□□□ 0.39
BRCA1-211ENST00000472490 SIRT2Q8IXJ6 389 aa17.48■□□□□ 0.39
BRCA1-211ENST00000472490 CNTROBQ8N137 903 aa17.48■□□□□ 0.39
BRCA1-211ENST00000472490 WDR66Q8TBY9 1149 aa17.48■□□□□ 0.39
BRCA1-211ENST00000472490 TRPM4Q8TD43 1214 aa17.48■□□□□ 0.39
BRCA1-211ENST00000472490 KIF1BPQ96EK5 621 aa17.48■□□□□ 0.39
BRCA1-211ENST00000472490 MXD3Q9BW11 206 aa17.48■□□□□ 0.39
BRCA1-211ENST00000472490 IQSEC3Q9UPP2 1182 aaPredicted RBP17.48■□□□□ 0.39
BRCA1-211ENST00000472490 EXOC6BQ9Y2D4 811 aa17.48■□□□□ 0.39
BRCA1-211ENST00000472490 SUGT1Q9Y2Z0 365 aa17.48■□□□□ 0.39
BRCA1-211ENST00000472490 FPGT-TNNI3KV9GXZ4 949 aa17.48■□□□□ 0.39
BRCA1-211ENST00000472490 SHTN1A0MZ66 631 aa17.47■□□□□ 0.39
BRCA1-211ENST00000472490 CCDC158Q5M9N0 1113 aa17.47■□□□□ 0.39
BRCA1-211ENST00000472490 CRBNQ96SW2 442 aa17.47■□□□□ 0.39
BRCA1-211ENST00000472490 PGAP2Q9UHJ9 254 aa17.47■□□□□ 0.39
BRCA1-211ENST00000472490 UQCRFS1P1P0C7P4 283 aa17.46■□□□□ 0.39
BRCA1-211ENST00000472490 HSPA6P17066 643 aa17.46■□□□□ 0.39
BRCA1-211ENST00000472490 PHKA1P46020 1223 aa17.46■□□□□ 0.39
BRCA1-211ENST00000472490 HIRAP54198 1017 aaPredicted RBP17.46■□□□□ 0.39
BRCA1-211ENST00000472490 MAP1SQ66K74 1059 aaPredicted RBP17.46■□□□□ 0.39
BRCA1-211ENST00000472490 CLASRPQ8N2M8 674 aaKnown RBP17.46■□□□□ 0.39
BRCA1-211ENST00000472490 ZGPATQ8N5A5 531 aaKnown RBP17.46■□□□□ 0.39
BRCA1-211ENST00000472490 CERS5Q8N5B7 392 aa17.46■□□□□ 0.39
BRCA1-211ENST00000472490 DCPSQ96C86 337 aaKnown RBP17.46■□□□□ 0.39
BRCA1-211ENST00000472490 JAG2Q9Y219 1238 aa17.46■□□□□ 0.39
BRCA1-211ENST00000472490 MAST3O60307 1309 aa17.46■□□□□ 0.38
BRCA1-211ENST00000472490 F8W031 263 aaPredicted RBP17.45■□□□□ 0.38
BRCA1-211ENST00000472490 ADORA1P30542 326 aa17.45■□□□□ 0.38
BRCA1-211ENST00000472490 CDC37L1Q7L3B6 337 aa17.45■□□□□ 0.38
BRCA1-211ENST00000472490 RHPN1Q8TCX5 695 aa17.45■□□□□ 0.38
BRCA1-211ENST00000472490 SCN9AQ15858 1988 aa17.45■□□□□ 0.38
BRCA1-211ENST00000472490 PDS5AQ29RF7 1337 aaKnown RBP17.45■□□□□ 0.38
BRCA1-211ENST00000472490 MYO1BO43795 1136 aa17.44■□□□□ 0.38
BRCA1-211ENST00000472490 APLP1P51693 650 aa17.44■□□□□ 0.38
BRCA1-211ENST00000472490 SCARF1Q14162 830 aa17.44■□□□□ 0.38
BRCA1-211ENST00000472490 DLGAP5Q15398 846 aa17.44■□□□□ 0.38
BRCA1-211ENST00000472490 TTF2Q9UNY4 1162 aaKnown RBP17.44■□□□□ 0.38
BRCA1-211ENST00000472490 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.44■□□□□ 0.38
BRCA1-211ENST00000472490 ITGBL1O95965 494 aaPredicted RBP17.43■□□□□ 0.38
BRCA1-211ENST00000472490 EGFRP00533 1210 aa17.43■□□□□ 0.38
BRCA1-211ENST00000472490 HDLBPQ00341 1268 aaKnown RBP17.43■□□□□ 0.38
BRCA1-211ENST00000472490 TTC39AQ5SRH9 613 aa17.43■□□□□ 0.38
BRCA1-211ENST00000472490 SULF1Q8IWU6 871 aa17.43■□□□□ 0.38
BRCA1-211ENST00000472490 MTMR14Q8NCE2 650 aa17.43■□□□□ 0.38
BRCA1-211ENST00000472490 SERPINA10Q9UK55 444 aa17.43■□□□□ 0.38
BRCA1-211ENST00000472490 SALL1Q9NSC2 1324 aa17.43■□□□□ 0.38
BRCA1-211ENST00000472490 PSME4Q14997 1843 aa17.42■□□□□ 0.38
BRCA1-211ENST00000472490 APBB1O00213 710 aa17.42■□□□□ 0.38
BRCA1-211ENST00000472490 WNT10BO00744 389 aa17.42■□□□□ 0.38
BRCA1-211ENST00000472490 RBM5P52756 815 aaKnown RBP eCLIP17.42■□□□□ 0.38
BRCA1-211ENST00000472490 RASGRF1Q13972 1273 aa17.42■□□□□ 0.38
BRCA1-211ENST00000472490 AACSQ86V21 672 aa17.42■□□□□ 0.38
BRCA1-211ENST00000472490 EAF2Q96CJ1 260 aaPredicted RBP17.42■□□□□ 0.38
BRCA1-211ENST00000472490 ZNF512BQ96KM6 892 aaPredicted RBP17.42■□□□□ 0.38
BRCA1-211ENST00000472490 DBNDD2Q9BQY9 259 aa17.42■□□□□ 0.38
BRCA1-211ENST00000472490 MRIQ9BWK5 157 aa17.42■□□□□ 0.38
BRCA1-211ENST00000472490 LRRCC1Q9C099 1032 aa17.42■□□□□ 0.38
BRCA1-211ENST00000472490 GGA3Q9NZ52 723 aa17.42■□□□□ 0.38
BRCA1-211ENST00000472490 ADAMTSL1Q8N6G6 1762 aa17.42■□□□□ 0.38
BRCA1-211ENST00000472490 PITPNM2Q9BZ72 1349 aa17.42■□□□□ 0.38
BRCA1-211ENST00000472490 LDHBP07195 334 aaKnown RBP17.41■□□□□ 0.38
BRCA1-211ENST00000472490 IFIT2P09913 472 aaKnown RBP17.41■□□□□ 0.38
BRCA1-211ENST00000472490 ARID4AP29374 1257 aaPredicted RBP17.41■□□□□ 0.38
BRCA1-211ENST00000472490 CFAP100Q494V2 611 aa17.41■□□□□ 0.38
BRCA1-211ENST00000472490 SPTY2D1Q68D10 685 aaPredicted RBP17.41■□□□□ 0.38
BRCA1-211ENST00000472490 KRT26Q7Z3Y9 468 aa17.41■□□□□ 0.38
BRCA1-211ENST00000472490 SPATA5Q8NB90 893 aa17.41■□□□□ 0.38
BRCA1-211ENST00000472490 TEKT1Q969V4 418 aa17.41■□□□□ 0.38
BRCA1-211ENST00000472490 DCTPP1Q9H773 170 aa17.41■□□□□ 0.38
BRCA1-211ENST00000472490 IL1RAPL2Q9NP60 686 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms