RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 SPATA5Q8NB90 893 aa12.8□□□□□ -0.36
UBE2F-220ENST00000472479 RNF181Q9P0P0 153 aa12.8□□□□□ -0.36
UBE2F-220ENST00000472479 ABCF2Q9UG63 623 aa12.8□□□□□ -0.36
UBE2F-220ENST00000472479 STAP2Q9UGK3 403 aa12.8□□□□□ -0.36
UBE2F-220ENST00000472479 GOLIM4O00461 696 aa12.79□□□□□ -0.36
UBE2F-220ENST00000472479 ZAP70P43403 619 aa12.79□□□□□ -0.36
UBE2F-220ENST00000472479 TTF1Q15361 905 aaPredicted RBP12.79□□□□□ -0.36
UBE2F-220ENST00000472479 CNTROBQ8N137 903 aa12.79□□□□□ -0.36
UBE2F-220ENST00000472479 TDRD7Q8NHU6 1098 aaKnown RBP12.79□□□□□ -0.36
UBE2F-220ENST00000472479 WDR66Q8TBY9 1149 aa12.79□□□□□ -0.36
UBE2F-220ENST00000472479 LRP2BPQ9P2M1 347 aa12.79□□□□□ -0.36
UBE2F-220ENST00000472479 ZNRF3Q9ULT6 936 aa12.79□□□□□ -0.36
UBE2F-220ENST00000472479 LTBP3Q9NS15 1303 aa12.79□□□□□ -0.36
UBE2F-220ENST00000472479 KIAA1551Q9HCM1 1747 aa12.79□□□□□ -0.36
UBE2F-220ENST00000472479 USP17L3A6NCW0 530 aa12.78□□□□□ -0.36
UBE2F-220ENST00000472479 USP17L4A6NCW7 530 aa12.78□□□□□ -0.36
UBE2F-220ENST00000472479 RAD17O75943 681 aa12.78□□□□□ -0.36
UBE2F-220ENST00000472479 ARID4AP29374 1257 aaPredicted RBP12.78□□□□□ -0.36
UBE2F-220ENST00000472479 MCAMP43121 646 aa12.78□□□□□ -0.36
UBE2F-220ENST00000472479 AOX1Q06278 1338 aa12.78□□□□□ -0.36
UBE2F-220ENST00000472479 RASGRF1Q13972 1273 aa12.78□□□□□ -0.36
UBE2F-220ENST00000472479 LRRFIP1Q32MZ4 808 aaKnown RBP12.78□□□□□ -0.36
UBE2F-220ENST00000472479 USP17L1Q7RTZ2 530 aa12.78□□□□□ -0.36
UBE2F-220ENST00000472479 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.78□□□□□ -0.36
UBE2F-220ENST00000472479 ZNF512BQ96KM6 892 aaPredicted RBP12.78□□□□□ -0.36
UBE2F-220ENST00000472479 PAG1Q9NWQ8 432 aa12.78□□□□□ -0.36
UBE2F-220ENST00000472479 HMG20BQ9P0W2 317 aa12.78□□□□□ -0.36
UBE2F-220ENST00000472479 NDUFB9Q9Y6M9 179 aa12.78□□□□□ -0.36
UBE2F-220ENST00000472479 IL1R1P14778 569 aa12.78□□□□□ -0.36
UBE2F-220ENST00000472479 SCARF1Q14162 830 aa12.78□□□□□ -0.36
UBE2F-220ENST00000472479 TNIP1Q15025 636 aa12.78□□□□□ -0.36
UBE2F-220ENST00000472479 TTC22Q5TAA0 569 aa12.78□□□□□ -0.36
UBE2F-220ENST00000472479 C9orf131Q5VYM1 1079 aa12.78□□□□□ -0.36
UBE2F-220ENST00000472479 SPTY2D1Q68D10 685 aaPredicted RBP12.78□□□□□ -0.36
UBE2F-220ENST00000472479 ZGPATQ8N5A5 531 aaKnown RBP12.78□□□□□ -0.36
UBE2F-220ENST00000472479 HAUS7Q99871 368 aa12.78□□□□□ -0.36
UBE2F-220ENST00000472479 FSD1Q9BTV5 496 aa12.78□□□□□ -0.36
UBE2F-220ENST00000472479 OSBPL3Q9H4L5 887 aa12.78□□□□□ -0.36
UBE2F-220ENST00000472479 RAI14Q9P0K7 980 aa12.78□□□□□ -0.36
UBE2F-220ENST00000472479 GJA3Q9Y6H8 435 aa12.78□□□□□ -0.36
UBE2F-220ENST00000472479 IDH1O75874 414 aaKnown RBP12.77□□□□□ -0.37
UBE2F-220ENST00000472479 PI16Q6UXB8 463 aa12.77□□□□□ -0.37
UBE2F-220ENST00000472479 TBC1D9Q6ZT07 1266 aa12.77□□□□□ -0.37
UBE2F-220ENST00000472479 ERICH6Q7L0X2 663 aa12.77□□□□□ -0.37
UBE2F-220ENST00000472479 PI4K2BQ8TCG2 481 aa12.77□□□□□ -0.37
UBE2F-220ENST00000472479 TBC1D22AQ8WUA7 517 aa12.77□□□□□ -0.37
UBE2F-220ENST00000472479 EVI5LQ96CN4 794 aa12.77□□□□□ -0.37
UBE2F-220ENST00000472479 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.77□□□□□ -0.37
UBE2F-220ENST00000472479 SALL3Q9BXA9 1300 aa12.76□□□□□ -0.37
UBE2F-220ENST00000472479 LRRC37AA6NMS7 1700 aa12.76□□□□□ -0.37
UBE2F-220ENST00000472479 F8W031 263 aaPredicted RBP12.76□□□□□ -0.37
UBE2F-220ENST00000472479 LDHBP07195 334 aaKnown RBP12.76□□□□□ -0.37
UBE2F-220ENST00000472479 MAP3K12Q12852 859 aa12.76□□□□□ -0.37
UBE2F-220ENST00000472479 MFSD14BQ5SR56 506 aa12.76□□□□□ -0.37
UBE2F-220ENST00000472479 CIAPIN1Q6FI81 312 aa12.76□□□□□ -0.37
UBE2F-220ENST00000472479 EDC3Q96F86 508 aaKnown RBP12.76□□□□□ -0.37
UBE2F-220ENST00000472479 KCNQ5Q9NR82 932 aa12.76□□□□□ -0.37
UBE2F-220ENST00000472479 IRS2Q9Y4H2 1338 aa12.75□□□□□ -0.37
UBE2F-220ENST00000472479 STRIP1Q5VSL9 837 aa12.75□□□□□ -0.37
UBE2F-220ENST00000472479 ZSCAN25Q6NSZ9 544 aa12.75□□□□□ -0.37
UBE2F-220ENST00000472479 DPY19L2Q6NUT2 758 aa12.75□□□□□ -0.37
UBE2F-220ENST00000472479 CASC1Q6TDU7 716 aa12.75□□□□□ -0.37
UBE2F-220ENST00000472479 DZIP1Q86YF9 867 aaKnown RBP12.75□□□□□ -0.37
UBE2F-220ENST00000472479 CYP2E1P05181 493 aaPredicted RBP12.74□□□□□ -0.37
UBE2F-220ENST00000472479 RBM5P52756 815 aaKnown RBP eCLIP12.74□□□□□ -0.37
UBE2F-220ENST00000472479 CXCL9Q07325 125 aa12.74□□□□□ -0.37
UBE2F-220ENST00000472479 NOL10Q9BSC4 688 aaKnown RBP12.74□□□□□ -0.37
UBE2F-220ENST00000472479 ANTXR1Q9H6X2 564 aa12.74□□□□□ -0.37
UBE2F-220ENST00000472479 DIAPH3Q9NSV4 1193 aa12.74□□□□□ -0.37
UBE2F-220ENST00000472479 HDAC9Q9UKV0 1011 aa12.74□□□□□ -0.37
UBE2F-220ENST00000472479 BRCA1P38398 1863 aaKnown RBP12.74□□□□□ -0.37
UBE2F-220ENST00000472479 DUOX1Q9NRD9 1551 aa12.74□□□□□ -0.37
UBE2F-220ENST00000472479 FAM205AQ6ZU69 1335 aa12.73□□□□□ -0.37
UBE2F-220ENST00000472479 YDJCA8MPS7 323 aa12.73□□□□□ -0.37
UBE2F-220ENST00000472479 PSMD14O00487 310 aa12.73□□□□□ -0.37
UBE2F-220ENST00000472479 SDSP20132 328 aa12.73□□□□□ -0.37
UBE2F-220ENST00000472479 GSTO1P78417 241 aa12.73□□□□□ -0.37
UBE2F-220ENST00000472479 BMP2KLQ5H9B9 411 aa12.73□□□□□ -0.37
UBE2F-220ENST00000472479 SLF2Q8IX21 1173 aa12.73□□□□□ -0.37
UBE2F-220ENST00000472479 OGFOD1Q8N543 542 aa12.73□□□□□ -0.37
UBE2F-220ENST00000472479 MXD3Q9BW11 206 aa12.73□□□□□ -0.37
UBE2F-220ENST00000472479 PIH1D3Q9NQM4 214 aaKnown RBP12.73□□□□□ -0.37
UBE2F-220ENST00000472479 SNED1Q8TER0 1413 aa12.73□□□□□ -0.37
UBE2F-220ENST00000472479 ARFGEF1Q9Y6D6 1849 aa12.72□□□□□ -0.37
UBE2F-220ENST00000472479 HIP1O00291 1037 aa12.72□□□□□ -0.37
UBE2F-220ENST00000472479 LDHCP07864 332 aa12.72□□□□□ -0.37
UBE2F-220ENST00000472479 GSPT1P15170 499 aaKnown RBP12.72□□□□□ -0.37
UBE2F-220ENST00000472479 SLC9C2Q5TAH2 1124 aa12.72□□□□□ -0.37
UBE2F-220ENST00000472479 NAA16Q6N069 864 aaPredicted RBP12.72□□□□□ -0.37
UBE2F-220ENST00000472479 RSBN1LQ6PCB5 846 aaPredicted RBP12.72□□□□□ -0.37
UBE2F-220ENST00000472479 KIAA0825Q8IV33 1275 aa12.72□□□□□ -0.37
UBE2F-220ENST00000472479 KBTBD3Q8NAB2 608 aa12.72□□□□□ -0.37
UBE2F-220ENST00000472479 TTF2Q9UNY4 1162 aaKnown RBP12.72□□□□□ -0.37
UBE2F-220ENST00000472479 PDS5AQ29RF7 1337 aaKnown RBP12.72□□□□□ -0.37
UBE2F-220ENST00000472479 MYO3BQ8WXR4 1341 aa12.72□□□□□ -0.37
UBE2F-220ENST00000472479 FZD9O00144 591 aa12.72□□□□□ -0.37
UBE2F-220ENST00000472479 CYP7A1P22680 504 aa12.72□□□□□ -0.37
UBE2F-220ENST00000472479 PRELPP51888 382 aa12.72□□□□□ -0.37
UBE2F-220ENST00000472479 MAGEB6Q8N7X4 407 aa12.72□□□□□ -0.37
UBE2F-220ENST00000472479 ZBTB12Q9Y330 459 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms