RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	TXNRD3	Q86VQ6	643 aa		12.9	□□□□□ -0.34
MRPS18B-208	ENST00000472267	C2CD5	Q86YS7	1000 aa		12.9	□□□□□ -0.34
MRPS18B-208	ENST00000472267	CCDC125	Q86Z20	511 aa		12.9	□□□□□ -0.34
MRPS18B-208	ENST00000472267	UPF3B	Q9BZI7	483 aa	Known RBP	12.9	□□□□□ -0.34
MRPS18B-208	ENST00000472267	LRP2BP	Q9P2M1	347 aa		12.9	□□□□□ -0.34
MRPS18B-208	ENST00000472267	DENND2A	Q9ULE3	1009 aa		12.9	□□□□□ -0.34
MRPS18B-208	ENST00000472267		U3KPZ7	1027 aa	Predicted RBP	12.9	□□□□□ -0.34
MRPS18B-208	ENST00000472267	COL11A2	P13942	1736 aa	Predicted RBP	12.9	□□□□□ -0.34
MRPS18B-208	ENST00000472267	ZNF532	Q9HCE3	1301 aa		12.9	□□□□□ -0.35
MRPS18B-208	ENST00000472267	DOCK2	Q92608	1830 aa		12.89	□□□□□ -0.35
MRPS18B-208	ENST00000472267		K7ELQ4	463 aa	Predicted RBP	12.89	□□□□□ -0.35
MRPS18B-208	ENST00000472267	ATP2B4	P23634	1241 aa		12.89	□□□□□ -0.35
MRPS18B-208	ENST00000472267	CHAF1A	Q13111	956 aa	Predicted RBP	12.89	□□□□□ -0.35
MRPS18B-208	ENST00000472267	VPS53	Q5VIR6	699 aa		12.89	□□□□□ -0.35
MRPS18B-208	ENST00000472267	RNF20	Q5VTR2	975 aa		12.89	□□□□□ -0.35
MRPS18B-208	ENST00000472267	MAGEB6	Q8N7X4	407 aa		12.89	□□□□□ -0.35
MRPS18B-208	ENST00000472267	MASTL	Q96GX5	879 aa		12.89	□□□□□ -0.35
MRPS18B-208	ENST00000472267	PUS7L	Q9H0K6	701 aa	Known RBP	12.89	□□□□□ -0.35
MRPS18B-208	ENST00000472267	SLK	Q9H2G2	1235 aa	Predicted RBP	12.89	□□□□□ -0.35
MRPS18B-208	ENST00000472267	ABCF2	Q9UG63	623 aa		12.89	□□□□□ -0.35
MRPS18B-208	ENST00000472267	GGA1	Q9UJY5	639 aa		12.89	□□□□□ -0.35
MRPS18B-208	ENST00000472267	CACNA1S	Q13698	1873 aa		12.89	□□□□□ -0.35
MRPS18B-208	ENST00000472267	COL1A1	P02452	1464 aa	Predicted RBP	12.89	□□□□□ -0.35
MRPS18B-208	ENST00000472267	ALDH1B1	P30837	517 aa		12.88	□□□□□ -0.35
MRPS18B-208	ENST00000472267	UBE3C	Q15386	1083 aa		12.88	□□□□□ -0.35
MRPS18B-208	ENST00000472267	IL17RA	Q96F46	866 aa		12.88	□□□□□ -0.35
MRPS18B-208	ENST00000472267	JAKMIP1	Q96N16	626 aa	Known RBP	12.88	□□□□□ -0.35
MRPS18B-208	ENST00000472267	RAI14	Q9P0K7	980 aa		12.88	□□□□□ -0.35
MRPS18B-208	ENST00000472267		H0YIN7	160 aa		12.88	□□□□□ -0.35
MRPS18B-208	ENST00000472267	SEMA3E	O15041	775 aa		12.88	□□□□□ -0.35
MRPS18B-208	ENST00000472267	GPAA1	O43292	621 aa		12.88	□□□□□ -0.35
MRPS18B-208	ENST00000472267	HSP90AA1	P07900	732 aa	Known RBP	12.88	□□□□□ -0.35
MRPS18B-208	ENST00000472267	HSPD1	P10809	573 aa	Known RBP	12.88	□□□□□ -0.35
MRPS18B-208	ENST00000472267	CAST	P20810	708 aa	Known RBP	12.88	□□□□□ -0.35
MRPS18B-208	ENST00000472267	ADCK5	Q3MIX3	580 aa		12.88	□□□□□ -0.35
MRPS18B-208	ENST00000472267	NOL8	Q76FK4	1167 aa	Known RBP	12.88	□□□□□ -0.35
MRPS18B-208	ENST00000472267	TMC4	Q7Z404	712 aa		12.88	□□□□□ -0.35
MRPS18B-208	ENST00000472267	SP8	Q8IXZ3	490 aa		12.88	□□□□□ -0.35
MRPS18B-208	ENST00000472267	KCNB2	Q92953	911 aa		12.88	□□□□□ -0.35
MRPS18B-208	ENST00000472267	DSCC1	Q9BVC3	393 aa		12.88	□□□□□ -0.35
MRPS18B-208	ENST00000472267	FOXD4L1	Q9NU39	408 aa		12.88	□□□□□ -0.35
MRPS18B-208	ENST00000472267	JAG2	Q9Y219	1238 aa		12.88	□□□□□ -0.35
MRPS18B-208	ENST00000472267	IRS2	Q9Y4H2	1338 aa		12.87	□□□□□ -0.35
MRPS18B-208	ENST00000472267	TCRBV5S4A2T	A0A5A2	114 aa		12.87	□□□□□ -0.35
MRPS18B-208	ENST00000472267	C6orf229	H3BNL8	230 aa		12.87	□□□□□ -0.35
MRPS18B-208	ENST00000472267	CPA1	P15085	419 aa		12.87	□□□□□ -0.35
MRPS18B-208	ENST00000472267	ZNF804A	Q7Z570	1209 aa		12.87	□□□□□ -0.35
MRPS18B-208	ENST00000472267	TMX4	Q9H1E5	349 aa	Predicted RBP	12.87	□□□□□ -0.35
MRPS18B-208	ENST00000472267	ATP6V0A2	Q9Y487	856 aa		12.87	□□□□□ -0.35
MRPS18B-208	ENST00000472267	LRRC37A	A6NMS7	1700 aa		12.86	□□□□□ -0.35
MRPS18B-208	ENST00000472267	CHRNA5	P30532	468 aa		12.86	□□□□□ -0.35
MRPS18B-208	ENST00000472267	OLFM4	Q6UX06	510 aa		12.86	□□□□□ -0.35
MRPS18B-208	ENST00000472267	TBC1D16	Q8TBP0	767 aa		12.86	□□□□□ -0.35
MRPS18B-208	ENST00000472267	AIDA	Q96BJ3	306 aa		12.86	□□□□□ -0.35
MRPS18B-208	ENST00000472267	POLL	Q9UGP5	575 aa		12.86	□□□□□ -0.35
MRPS18B-208	ENST00000472267	TAF6L	Q9Y6J9	622 aa		12.86	□□□□□ -0.35
MRPS18B-208	ENST00000472267	CYP7A1	P22680	504 aa		12.85	□□□□□ -0.35
MRPS18B-208	ENST00000472267	STYK1	Q6J9G0	422 aa		12.85	□□□□□ -0.35
MRPS18B-208	ENST00000472267	PODXL2	Q9NZ53	605 aa		12.85	□□□□□ -0.35
MRPS18B-208	ENST00000472267	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.85	□□□□□ -0.35
MRPS18B-208	ENST00000472267	MBD4	O95243	580 aa		12.84	□□□□□ -0.35
MRPS18B-208	ENST00000472267	APP	P05067	770 aa		12.84	□□□□□ -0.35
MRPS18B-208	ENST00000472267	CYP21A2	P08686	494 aa		12.84	□□□□□ -0.35
MRPS18B-208	ENST00000472267	PSMA5	P28066	241 aa		12.84	□□□□□ -0.35
MRPS18B-208	ENST00000472267	C15orf52	Q6ZUT6	534 aa	Known RBP	12.84	□□□□□ -0.35
MRPS18B-208	ENST00000472267	MPND	Q8N594	471 aa		12.84	□□□□□ -0.35
MRPS18B-208	ENST00000472267	SLC16A10	Q8TF71	515 aa		12.84	□□□□□ -0.35
MRPS18B-208	ENST00000472267	TM6SF1	Q9BZW5	370 aa		12.84	□□□□□ -0.35
MRPS18B-208	ENST00000472267	ARMT1	Q9H993	441 aa		12.84	□□□□□ -0.35
MRPS18B-208	ENST00000472267	CYP46A1	Q9Y6A2	500 aa		12.84	□□□□□ -0.35
MRPS18B-208	ENST00000472267		A0A0G2JLW4	131 aa		12.84	□□□□□ -0.35
MRPS18B-208	ENST00000472267	RIMBP2	O15034	1052 aa		12.84	□□□□□ -0.35
MRPS18B-208	ENST00000472267	ZBTB7A	O95365	584 aa		12.84	□□□□□ -0.35
MRPS18B-208	ENST00000472267	MCM2	P49736	904 aa		12.84	□□□□□ -0.35
MRPS18B-208	ENST00000472267	TTLL5	Q6EMB2	1281 aa		12.84	□□□□□ -0.35
MRPS18B-208	ENST00000472267	DPP8	Q6V1X1	898 aa	Predicted RBP	12.84	□□□□□ -0.35
MRPS18B-208	ENST00000472267	MIGA1	Q8NAN2	632 aa		12.84	□□□□□ -0.35
MRPS18B-208	ENST00000472267	TDRD7	Q8NHU6	1098 aa	Known RBP	12.84	□□□□□ -0.35
MRPS18B-208	ENST00000472267	ZSWIM6	Q9HCJ5	1215 aa		12.84	□□□□□ -0.35
MRPS18B-208	ENST00000472267	PDRG1	Q9NUG6	133 aa		12.84	□□□□□ -0.35
MRPS18B-208	ENST00000472267	CTNNA3	Q9UI47	895 aa		12.84	□□□□□ -0.35
MRPS18B-208	ENST00000472267	PDS5A	Q29RF7	1337 aa	Known RBP	12.84	□□□□□ -0.35
MRPS18B-208	ENST00000472267	FOXP2	O15409	715 aa		12.83	□□□□□ -0.36
MRPS18B-208	ENST00000472267	KRT32	Q14532	448 aa		12.83	□□□□□ -0.36
MRPS18B-208	ENST00000472267	NAA16	Q6N069	864 aa	Predicted RBP	12.83	□□□□□ -0.36
MRPS18B-208	ENST00000472267	BLOC1S2	Q6QNY1	142 aa		12.83	□□□□□ -0.36
MRPS18B-208	ENST00000472267	RUFY3	Q7L099	469 aa		12.83	□□□□□ -0.36
MRPS18B-208	ENST00000472267	STRBP	Q96SI9	672 aa	Known RBP	12.83	□□□□□ -0.36
MRPS18B-208	ENST00000472267	LARP6	Q9BRS8	491 aa	Known RBP	12.83	□□□□□ -0.36
MRPS18B-208	ENST00000472267	CD209	Q9NNX6	404 aa		12.83	□□□□□ -0.36
MRPS18B-208	ENST00000472267	LTBP1	Q14766	1721 aa		12.83	□□□□□ -0.36
MRPS18B-208	ENST00000472267	SLX4	Q8IY92	1834 aa		12.83	□□□□□ -0.36
MRPS18B-208	ENST00000472267	RPAP1	Q9BWH6	1393 aa	Predicted RBP	12.83	□□□□□ -0.36
MRPS18B-208	ENST00000472267	FGA	P02671	866 aa		12.82	□□□□□ -0.36
MRPS18B-208	ENST00000472267	AK2	P54819	239 aa		12.82	□□□□□ -0.36
MRPS18B-208	ENST00000472267	HAND2	P61296	217 aa		12.82	□□□□□ -0.36
MRPS18B-208	ENST00000472267	TSGA10IP	Q3SY00	556 aa		12.82	□□□□□ -0.36
MRPS18B-208	ENST00000472267	LCORL	Q8N3X6	602 aa		12.82	□□□□□ -0.36
MRPS18B-208	ENST00000472267	WDR66	Q8TBY9	1149 aa		12.82	□□□□□ -0.36
MRPS18B-208	ENST00000472267	CNKSR1	Q969H4	720 aa		12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms