RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 MS4A4AQ96JQ5 239 aa13.53□□□□□ -0.24
SPC25-203ENST00000472216 ZNF576Q9H609 170 aa13.53□□□□□ -0.24
SPC25-203ENST00000472216 ABCC12Q96J65 1359 aa13.53□□□□□ -0.24
SPC25-203ENST00000472216 TPRP12270 2363 aaKnown RBP13.52□□□□□ -0.24
SPC25-203ENST00000472216 ECE2O60344 883 aa13.52□□□□□ -0.25
SPC25-203ENST00000472216 BBOX1O75936 387 aa13.52□□□□□ -0.25
SPC25-203ENST00000472216 A1BGP04217 495 aa13.52□□□□□ -0.25
SPC25-203ENST00000472216 USP17L8P0C7I0 530 aa13.52□□□□□ -0.25
SPC25-203ENST00000472216 ID4P47928 161 aa13.52□□□□□ -0.25
SPC25-203ENST00000472216 TFF2Q03403 129 aa13.52□□□□□ -0.25
SPC25-203ENST00000472216 FAM43AQ8N2R8 423 aa13.52□□□□□ -0.25
SPC25-203ENST00000472216 BRI3BPQ8WY22 251 aa13.52□□□□□ -0.25
SPC25-203ENST00000472216 DACH1Q9UI36 760 aa13.52□□□□□ -0.25
SPC25-203ENST00000472216 ADCY3O60266 1144 aa13.51□□□□□ -0.25
SPC25-203ENST00000472216 PRKCZQ05513 592 aa13.51□□□□□ -0.25
SPC25-203ENST00000472216 C9orf50Q5SZB4 431 aa13.51□□□□□ -0.25
SPC25-203ENST00000472216 CNTNAP3BQ96NU0 1288 aa13.51□□□□□ -0.25
SPC25-203ENST00000472216 CNTNAP3Q9BZ76 1288 aa13.51□□□□□ -0.25
SPC25-203ENST00000472216 CCL15-CCL14A0A0B4J2E2 113 aa13.5□□□□□ -0.25
SPC25-203ENST00000472216 NBPF26B4DH59 902 aa13.5□□□□□ -0.25
SPC25-203ENST00000472216 CCL15Q16663 113 aa13.5□□□□□ -0.25
SPC25-203ENST00000472216 NBPF9Q3BBW0 867 aa13.5□□□□□ -0.25
SPC25-203ENST00000472216 TTC5Q8N0Z6 440 aa13.5□□□□□ -0.25
SPC25-203ENST00000472216 FASNP49327 2511 aaKnown RBP13.5□□□□□ -0.25
SPC25-203ENST00000472216 DNAH12Q6ZR08 3092 aa13.49□□□□□ -0.25
SPC25-203ENST00000472216 RIMBP2O15034 1052 aa13.49□□□□□ -0.25
SPC25-203ENST00000472216 GTF2A2P52657 109 aa13.49□□□□□ -0.25
SPC25-203ENST00000472216 PXYLP1Q8TE99 480 aa13.49□□□□□ -0.25
SPC25-203ENST00000472216 PRKAG2Q9UGJ0 569 aa13.48□□□□□ -0.25
SPC25-203ENST00000472216 SLC24A1O60721 1099 aa13.47□□□□□ -0.25
SPC25-203ENST00000472216 ELNP15502 786 aa13.47□□□□□ -0.25
SPC25-203ENST00000472216 IGFBP4P22692 258 aa13.47□□□□□ -0.25
SPC25-203ENST00000472216 DOK7Q18PE1 504 aa13.47□□□□□ -0.25
SPC25-203ENST00000472216 RSBN1LQ6PCB5 846 aaPredicted RBP13.47□□□□□ -0.25
SPC25-203ENST00000472216 C17orf99Q6UX52 265 aa13.47□□□□□ -0.25
SPC25-203ENST00000472216 OPTNQ96CV9 577 aa13.47□□□□□ -0.25
SPC25-203ENST00000472216 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.47□□□□□ -0.25
SPC25-203ENST00000472216 ZCCHC17Q9NP64 241 aaKnown RBP13.47□□□□□ -0.25
SPC25-203ENST00000472216 PFASO15067 1338 aa13.46□□□□□ -0.25
SPC25-203ENST00000472216 ALADP13716 330 aa13.46□□□□□ -0.25
SPC25-203ENST00000472216 DNAJB2P25686 324 aa13.46□□□□□ -0.25
SPC25-203ENST00000472216 IREB2P48200 963 aaKnown RBP13.46□□□□□ -0.25
SPC25-203ENST00000472216 APOBEC3FQ8IUX4 373 aaKnown RBP13.46□□□□□ -0.25
SPC25-203ENST00000472216 ANKRD13AQ8IZ07 590 aa13.46□□□□□ -0.25
SPC25-203ENST00000472216 LGR6Q9HBX8 967 aa13.46□□□□□ -0.25
SPC25-203ENST00000472216 COL3A1P02461 1466 aaPredicted RBP13.46□□□□□ -0.25
SPC25-203ENST00000472216 ABCC4O15439 1325 aa13.45□□□□□ -0.26
SPC25-203ENST00000472216 PTPN5P54829 565 aa13.45□□□□□ -0.26
SPC25-203ENST00000472216 LRRC26Q2I0M4 334 aa13.45□□□□□ -0.26
SPC25-203ENST00000472216 PODNQ7Z5L7 613 aa13.45□□□□□ -0.26
SPC25-203ENST00000472216 NLRP3Q96P20 1036 aa13.45□□□□□ -0.26
SPC25-203ENST00000472216 PRDM12Q9H4Q4 367 aa13.45□□□□□ -0.26
SPC25-203ENST00000472216 LAMB2P55268 1798 aa13.45□□□□□ -0.26
SPC25-203ENST00000472216 REV3LO60673 3130 aa13.44□□□□□ -0.26
SPC25-203ENST00000472216 GPR179Q6PRD1 2367 aa13.44□□□□□ -0.26
SPC25-203ENST00000472216 MED19A0JLT2 244 aaPredicted RBP13.44□□□□□ -0.26
SPC25-203ENST00000472216 TLL1O43897 1013 aa13.44□□□□□ -0.26
SPC25-203ENST00000472216 U2AF1L5P0DN76 240 aaPredicted RBP13.44□□□□□ -0.26
SPC25-203ENST00000472216 FCGRTP55899 365 aa13.44□□□□□ -0.26
SPC25-203ENST00000472216 U2AF1Q01081 240 aaKnown RBP eCLIP13.44□□□□□ -0.26
SPC25-203ENST00000472216 CPA4Q9UI42 421 aa13.44□□□□□ -0.26
SPC25-203ENST00000472216 WNT10BO00744 389 aa13.43□□□□□ -0.26
SPC25-203ENST00000472216 ERC2O15083 957 aa13.43□□□□□ -0.26
SPC25-203ENST00000472216 EIF4A2Q14240 407 aaKnown RBP13.43□□□□□ -0.26
SPC25-203ENST00000472216 TIFAQ96CG3 184 aa13.43□□□□□ -0.26
SPC25-203ENST00000472216 PUS7Q96PZ0 661 aaKnown RBP13.43□□□□□ -0.26
SPC25-203ENST00000472216 GABRQQ9UN88 632 aa13.43□□□□□ -0.26
SPC25-203ENST00000472216 HEG1Q9ULI3 1381 aa13.43□□□□□ -0.26
SPC25-203ENST00000472216 G3V3G9 751 aa13.42□□□□□ -0.26
SPC25-203ENST00000472216 C6orf229H3BNL8 230 aa13.42□□□□□ -0.26
SPC25-203ENST00000472216 DCAF8Q5TAQ9 597 aa13.42□□□□□ -0.26
SPC25-203ENST00000472216 C3orf67Q6ZVT6 689 aa13.42□□□□□ -0.26
SPC25-203ENST00000472216 GMLQ99445 158 aa13.42□□□□□ -0.26
SPC25-203ENST00000472216 EYA3Q99504 573 aa13.42□□□□□ -0.26
SPC25-203ENST00000472216 ELP3Q9H9T3 547 aa13.42□□□□□ -0.26
SPC25-203ENST00000472216 ACACBO00763 2458 aa13.41□□□□□ -0.26
SPC25-203ENST00000472216 FLT3LGP49771 235 aa13.41□□□□□ -0.26
SPC25-203ENST00000472216 ADGRE1Q14246 886 aa13.41□□□□□ -0.26
SPC25-203ENST00000472216 SKIV2LQ15477 1246 aaKnown RBP13.41□□□□□ -0.26
SPC25-203ENST00000472216 NBPF10Q6P3W6 841 aaKnown RBP13.41□□□□□ -0.26
SPC25-203ENST00000472216 OGDHLQ9ULD0 1010 aa13.41□□□□□ -0.26
SPC25-203ENST00000472216 DDX60LQ5H9U9 1706 aaKnown RBP13.41□□□□□ -0.26
SPC25-203ENST00000472216 MYO9BQ13459 2157 aa13.4□□□□□ -0.26
SPC25-203ENST00000472216 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.4□□□□□ -0.26
SPC25-203ENST00000472216 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.4□□□□□ -0.26
SPC25-203ENST00000472216 RNMTO43148 476 aaKnown RBP13.4□□□□□ -0.26
SPC25-203ENST00000472216 HLFQ16534 295 aa13.4□□□□□ -0.26
SPC25-203ENST00000472216 SUPT20HL1Q3ZLR7 823 aa13.4□□□□□ -0.26
SPC25-203ENST00000472216 OGFOD1Q8N543 542 aa13.4□□□□□ -0.26
SPC25-203ENST00000472216 RNPC3Q96LT9 517 aaKnown RBP13.4□□□□□ -0.26
SPC25-203ENST00000472216 MFSD14AQ96MC6 490 aa13.4□□□□□ -0.26
SPC25-203ENST00000472216 DEFB129Q9H1M3 183 aa13.4□□□□□ -0.26
SPC25-203ENST00000472216 NSFL1CQ9UNZ2 370 aaKnown RBP13.4□□□□□ -0.26
SPC25-203ENST00000472216 COL6A1P12109 1028 aa13.39□□□□□ -0.27
SPC25-203ENST00000472216 IRF5Q13568 498 aa13.39□□□□□ -0.27
SPC25-203ENST00000472216 TMC4Q7Z404 712 aa13.39□□□□□ -0.27
SPC25-203ENST00000472216 CD320Q9NPF0 282 aa13.39□□□□□ -0.27
SPC25-203ENST00000472216 ZNF318Q5VUA4 2279 aa13.38□□□□□ -0.27
SPC25-203ENST00000472216 BTBD19C9JJ37 291 aa13.38□□□□□ -0.27
SPC25-203ENST00000472216 USP2O75604 605 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms