RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 CLSTN2Q9H4D0 955 aa12.48□□□□□ -0.41
APLF-204ENST00000471727 PRC1O43663 620 aa12.47□□□□□ -0.41
APLF-204ENST00000471727 OFD1O75665 1012 aa12.47□□□□□ -0.41
APLF-204ENST00000471727 CTDNEP1O95476 244 aa12.47□□□□□ -0.41
APLF-204ENST00000471727 HCLS1P14317 486 aaPredicted RBP12.47□□□□□ -0.41
APLF-204ENST00000471727 SLFNL1Q499Z3 407 aa12.47□□□□□ -0.41
APLF-204ENST00000471727 SLC9C2Q5TAH2 1124 aa12.47□□□□□ -0.41
APLF-204ENST00000471727 CCDC102BQ68D86 513 aa12.47□□□□□ -0.41
APLF-204ENST00000471727 INTS5Q6P9B9 1019 aaKnown RBP12.47□□□□□ -0.41
APLF-204ENST00000471727 DDX11Q96FC9 970 aa12.47□□□□□ -0.41
APLF-204ENST00000471727 MPHOSPH8Q99549 860 aa12.47□□□□□ -0.41
APLF-204ENST00000471727 TNMDQ9H2S6 317 aa12.47□□□□□ -0.41
APLF-204ENST00000471727 TFIP11Q9UBB9 837 aaKnown RBP12.47□□□□□ -0.41
APLF-204ENST00000471727 ZNF652Q9Y2D9 606 aa12.47□□□□□ -0.41
APLF-204ENST00000471727 COL16A1Q07092 1604 aaPredicted RBP12.47□□□□□ -0.41
APLF-204ENST00000471727 UBN2Q6ZU65 1347 aa12.47□□□□□ -0.41
APLF-204ENST00000471727 ATP6V1AP38606 617 aa12.46□□□□□ -0.41
APLF-204ENST00000471727 MAP3K12Q12852 859 aa12.46□□□□□ -0.41
APLF-204ENST00000471727 TTLL5Q6EMB2 1281 aa12.46□□□□□ -0.41
APLF-204ENST00000471727 SYNE4Q8N205 404 aa12.46□□□□□ -0.41
APLF-204ENST00000471727 FAM200AQ8TCP9 573 aa12.46□□□□□ -0.41
APLF-204ENST00000471727 BICD2Q8TD16 824 aa12.46□□□□□ -0.41
APLF-204ENST00000471727 DACT1Q9NYF0 836 aa12.46□□□□□ -0.41
APLF-204ENST00000471727 USP25Q9UHP3 1055 aa12.46□□□□□ -0.41
APLF-204ENST00000471727 ROBO1Q9Y6N7 1651 aa12.46□□□□□ -0.42
APLF-204ENST00000471727 LOC102724428A0A0B4J2F2 783 aa12.45□□□□□ -0.42
APLF-204ENST00000471727 FOXP2O15409 715 aa12.45□□□□□ -0.42
APLF-204ENST00000471727 CDKL5O76039 1030 aa12.45□□□□□ -0.42
APLF-204ENST00000471727 LIG1P18858 919 aa12.45□□□□□ -0.42
APLF-204ENST00000471727 IGHMBP2P38935 993 aaKnown RBP12.45□□□□□ -0.42
APLF-204ENST00000471727 CRKLP46109 303 aaKnown RBP12.45□□□□□ -0.42
APLF-204ENST00000471727 SIK1P57059 783 aa12.45□□□□□ -0.42
APLF-204ENST00000471727 CCT2P78371 535 aaKnown RBP12.45□□□□□ -0.42
APLF-204ENST00000471727 SUSD4Q5VX71 490 aa12.45□□□□□ -0.42
APLF-204ENST00000471727 FAM173BQ6P4H8 233 aa12.45□□□□□ -0.42
APLF-204ENST00000471727 CPLX2Q6PUV4 134 aaKnown RBP12.45□□□□□ -0.42
APLF-204ENST00000471727 CLEC4GQ6UXB4 293 aa12.45□□□□□ -0.42
APLF-204ENST00000471727 TMEM87BQ96K49 555 aa12.45□□□□□ -0.42
APLF-204ENST00000471727 NAP1L5Q96NT1 182 aaPredicted RBP12.45□□□□□ -0.42
APLF-204ENST00000471727 WNK3Q9BYP7 1800 aa12.45□□□□□ -0.42
APLF-204ENST00000471727 LRP5O75197 1615 aa12.45□□□□□ -0.42
APLF-204ENST00000471727 GOLGA6L6A8MZA4 724 aa12.44□□□□□ -0.42
APLF-204ENST00000471727 CAMTA2O94983 1202 aa12.44□□□□□ -0.42
APLF-204ENST00000471727 ADCY5O95622 1261 aa12.44□□□□□ -0.42
APLF-204ENST00000471727 PDE6AP16499 860 aa12.44□□□□□ -0.42
APLF-204ENST00000471727 GNAT2P19087 354 aa12.44□□□□□ -0.42
APLF-204ENST00000471727 ADD1P35611 737 aaKnown RBP12.44□□□□□ -0.42
APLF-204ENST00000471727 SASS6Q6UVJ0 657 aa12.44□□□□□ -0.42
APLF-204ENST00000471727 BRAPQ7Z569 592 aa12.44□□□□□ -0.42
APLF-204ENST00000471727 CDC5LQ99459 802 aaKnown RBP12.44□□□□□ -0.42
APLF-204ENST00000471727 MTA3Q9BTC8 594 aa12.44□□□□□ -0.42
APLF-204ENST00000471727 NAP1L2Q9ULW6 460 aaPredicted RBP12.44□□□□□ -0.42
APLF-204ENST00000471727 SPATA31A5Q5VU36 1347 aa12.44□□□□□ -0.42
APLF-204ENST00000471727 SPATA31A7Q8IWB4 1347 aa12.44□□□□□ -0.42
APLF-204ENST00000471727 CICQ96RK0 1608 aaPredicted RBP12.44□□□□□ -0.42
APLF-204ENST00000471727 CARMIL3Q8ND23 1372 aa12.44□□□□□ -0.42
APLF-204ENST00000471727 KLF18A0A0U1RQI7 1052 aa12.44□□□□□ -0.42
APLF-204ENST00000471727 PATL2C9JE40 543 aaKnown RBP12.44□□□□□ -0.42
APLF-204ENST00000471727 CPLX1O14810 134 aa12.44□□□□□ -0.42
APLF-204ENST00000471727 IDH1O75874 414 aaKnown RBP12.44□□□□□ -0.42
APLF-204ENST00000471727 TPM2P07951 284 aa12.44□□□□□ -0.42
APLF-204ENST00000471727 PHKA1P46020 1223 aa12.44□□□□□ -0.42
APLF-204ENST00000471727 TYRO3Q06418 890 aa12.44□□□□□ -0.42
APLF-204ENST00000471727 KIAA2012Q0VF49 1180 aa12.44□□□□□ -0.42
APLF-204ENST00000471727 SPATA5Q8NB90 893 aa12.44□□□□□ -0.42
APLF-204ENST00000471727 AIDAQ96BJ3 306 aa12.44□□□□□ -0.42
APLF-204ENST00000471727 PGBD1Q96JS3 809 aa12.44□□□□□ -0.42
APLF-204ENST00000471727 PIH1D3Q9NQM4 214 aaKnown RBP12.44□□□□□ -0.42
APLF-204ENST00000471727 ANGEL1Q9UNK9 670 aaKnown RBP12.44□□□□□ -0.42
APLF-204ENST00000471727 ZNF532Q9HCE3 1301 aa12.44□□□□□ -0.42
APLF-204ENST00000471727 NUP98P52948 1817 aa12.43□□□□□ -0.42
APLF-204ENST00000471727 MYH3P11055 1940 aa12.43□□□□□ -0.42
APLF-204ENST00000471727 TCRBV5S4A2TA0A5A2 114 aa12.43□□□□□ -0.42
APLF-204ENST00000471727 HAND2P61296 217 aa12.43□□□□□ -0.42
APLF-204ENST00000471727 CCDC73Q6ZRK6 1079 aa12.43□□□□□ -0.42
APLF-204ENST00000471727 C8orf76Q96K31 380 aa12.43□□□□□ -0.42
APLF-204ENST00000471727 STRBPQ96SI9 672 aaKnown RBP12.43□□□□□ -0.42
APLF-204ENST00000471727 CNNM2Q9H8M5 875 aa12.43□□□□□ -0.42
APLF-204ENST00000471727 RTEL1Q9NZ71 1219 aa12.43□□□□□ -0.42
APLF-204ENST00000471727 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.43□□□□□ -0.42
APLF-204ENST00000471727 GOLGA8BA8MQT2 603 aa12.42□□□□□ -0.42
APLF-204ENST00000471727 YEATS4O95619 227 aa12.42□□□□□ -0.42
APLF-204ENST00000471727 PI16Q6UXB8 463 aa12.42□□□□□ -0.42
APLF-204ENST00000471727 MARCH10Q8NA82 808 aaPredicted RBP12.42□□□□□ -0.42
APLF-204ENST00000471727 FBXO18Q8NFZ0 1043 aa12.42□□□□□ -0.42
APLF-204ENST00000471727 NACAP1Q9BZK3 213 aa12.42□□□□□ -0.42
APLF-204ENST00000471727 NCOA5Q9HCD5 579 aaKnown RBP12.42□□□□□ -0.42
APLF-204ENST00000471727 ORC3Q9UBD5 711 aaPredicted RBP12.42□□□□□ -0.42
APLF-204ENST00000471727 RREB1Q92766 1687 aa12.42□□□□□ -0.42
APLF-204ENST00000471727 LAMA4Q16363 1823 aa12.42□□□□□ -0.42
APLF-204ENST00000471727 A0A0G2JLW4 131 aa12.41□□□□□ -0.42
APLF-204ENST00000471727 A0A1W2PQ27 194 aa12.41□□□□□ -0.42
APLF-204ENST00000471727 A0A1W2PQ64 194 aa12.41□□□□□ -0.42
APLF-204ENST00000471727 A0A1W2PQD8 194 aa12.41□□□□□ -0.42
APLF-204ENST00000471727 DTNBO60941 627 aa12.41□□□□□ -0.42
APLF-204ENST00000471727 NTSR2O95665 410 aa12.41□□□□□ -0.42
APLF-204ENST00000471727 APPP05067 770 aa12.41□□□□□ -0.42
APLF-204ENST00000471727 FDPSP14324 419 aaKnown RBP12.41□□□□□ -0.42
APLF-204ENST00000471727 ANTXR2P58335 489 aa12.41□□□□□ -0.42
APLF-204ENST00000471727 TPRNQ4KMQ1 711 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms