RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 SASH1O94885 1247 aa23.72■■□□□ 1.39
COMMD1-207ENST00000471704 PRAMEF18Q5VWM3 479 aa23.72■■□□□ 1.39
COMMD1-207ENST00000471704 CERS5Q8N5B7 392 aa23.72■■□□□ 1.39
COMMD1-207ENST00000471704 HDAC9Q9UKV0 1011 aa23.72■■□□□ 1.39
COMMD1-207ENST00000471704 NOB1Q9ULX3 412 aaKnown RBP23.72■■□□□ 1.39
COMMD1-207ENST00000471704 RARSP54136 660 aaKnown RBP23.71■■□□□ 1.39
COMMD1-207ENST00000471704 TAF7LQ5H9L4 462 aa23.71■■□□□ 1.39
COMMD1-207ENST00000471704 RASAL3Q86YV0 1011 aa23.71■■□□□ 1.39
COMMD1-207ENST00000471704 CSRNP1Q96S65 589 aa23.71■■□□□ 1.39
COMMD1-207ENST00000471704 SAGE1Q9NXZ1 904 aa23.71■■□□□ 1.39
COMMD1-207ENST00000471704 ARAP2Q8WZ64 1704 aa23.7■■□□□ 1.39
COMMD1-207ENST00000471704 MOB2Q70IA6 237 aa23.7■■□□□ 1.38
COMMD1-207ENST00000471704 ZNF804AQ7Z570 1209 aa23.7■■□□□ 1.38
COMMD1-207ENST00000471704 MTMR14Q8NCE2 650 aa23.7■■□□□ 1.38
COMMD1-207ENST00000471704 CNNM1Q9NRU3 951 aa23.7■■□□□ 1.38
COMMD1-207ENST00000471704 ECM29Q5VYK3 1845 aa23.7■■□□□ 1.38
COMMD1-207ENST00000471704 FKBP1AP62942 108 aaKnown RBP23.69■■□□□ 1.38
COMMD1-207ENST00000471704 RNF186Q9NXI6 227 aa23.69■■□□□ 1.38
COMMD1-207ENST00000471704 UBE2Q2LH0YL09 131 aa23.68■■□□□ 1.38
COMMD1-207ENST00000471704 PLIN1O60240 522 aa23.68■■□□□ 1.38
COMMD1-207ENST00000471704 APOBEC3FQ8IUX4 373 aaKnown RBP23.68■■□□□ 1.38
COMMD1-207ENST00000471704 REM2Q8IYK8 340 aaPredicted RBP23.68■■□□□ 1.38
COMMD1-207ENST00000471704 RIPOR2Q9Y4F9 1068 aa23.68■■□□□ 1.38
COMMD1-207ENST00000471704 UBE4AQ14139 1066 aa23.67■■□□□ 1.38
COMMD1-207ENST00000471704 LRRC24Q50LG9 513 aa23.67■■□□□ 1.38
COMMD1-207ENST00000471704 KLHDC4Q8TBB5 520 aa23.66■■□□□ 1.38
COMMD1-207ENST00000471704 FAM205AQ6ZU69 1335 aa23.65■■□□□ 1.38
COMMD1-207ENST00000471704 TRPA1O75762 1119 aa23.65■■□□□ 1.38
COMMD1-207ENST00000471704 DLGAP5Q15398 846 aa23.65■■□□□ 1.38
COMMD1-207ENST00000471704 MCOLN1Q9GZU1 580 aa23.65■■□□□ 1.38
COMMD1-207ENST00000471704 RFX5P48382 616 aaPredicted RBP23.64■■□□□ 1.37
COMMD1-207ENST00000471704 TDRD7Q8NHU6 1098 aaKnown RBP23.64■■□□□ 1.37
COMMD1-207ENST00000471704 PCDHAC2Q9Y5I4 1007 aa23.64■■□□□ 1.37
COMMD1-207ENST00000471704 COL1A1P02452 1464 aaPredicted RBP23.63■■□□□ 1.37
COMMD1-207ENST00000471704 NF2P35240 595 aa23.63■■□□□ 1.37
COMMD1-207ENST00000471704 HNRNPUQ00839 825 aaKnown RBP eCLIP23.63■■□□□ 1.37
COMMD1-207ENST00000471704 VGLL2Q8N8G2 317 aa23.63■■□□□ 1.37
COMMD1-207ENST00000471704 FAM84BQ96KN1 310 aaPredicted RBP23.63■■□□□ 1.37
COMMD1-207ENST00000471704 API5Q9BZZ5 524 aaKnown RBP23.63■■□□□ 1.37
COMMD1-207ENST00000471704 TNNQ9UQP3 1299 aa23.63■■□□□ 1.37
COMMD1-207ENST00000471704 MROH5Q6ZUA9 1318 aa23.62■■□□□ 1.37
COMMD1-207ENST00000471704 SPDYE2BA6NHP3 402 aa23.62■■□□□ 1.37
COMMD1-207ENST00000471704 SPDYE6P0CI01 402 aa23.62■■□□□ 1.37
COMMD1-207ENST00000471704 TTLL12Q14166 644 aaPredicted RBP23.62■■□□□ 1.37
COMMD1-207ENST00000471704 LDLRAD1Q5T700 205 aa23.62■■□□□ 1.37
COMMD1-207ENST00000471704 PRMT6Q96LA8 375 aaPredicted RBP23.62■■□□□ 1.37
COMMD1-207ENST00000471704 DEFB129Q9H1M3 183 aa23.62■■□□□ 1.37
COMMD1-207ENST00000471704 JAG2Q9Y219 1238 aa23.62■■□□□ 1.37
COMMD1-207ENST00000471704 MYH13Q9UKX3 1938 aa23.61■■□□□ 1.37
COMMD1-207ENST00000471704 F8W031 263 aaPredicted RBP23.61■■□□□ 1.37
COMMD1-207ENST00000471704 HIBADHP31937 336 aaKnown RBP23.61■■□□□ 1.37
COMMD1-207ENST00000471704 GYG1P46976 350 aa23.61■■□□□ 1.37
COMMD1-207ENST00000471704 PTPN12Q05209 780 aaKnown RBP23.61■■□□□ 1.37
COMMD1-207ENST00000471704 DGKZQ13574 1117 aa23.61■■□□□ 1.37
COMMD1-207ENST00000471704 CFAP100Q494V2 611 aa23.61■■□□□ 1.37
COMMD1-207ENST00000471704 AOX1Q06278 1338 aa23.6■■□□□ 1.37
COMMD1-207ENST00000471704 KIF16BQ96L93 1317 aa23.6■■□□□ 1.37
COMMD1-207ENST00000471704 BCAR3O75815 825 aa23.6■■□□□ 1.37
COMMD1-207ENST00000471704 ARHGAP45Q92619 1136 aa23.6■■□□□ 1.37
COMMD1-207ENST00000471704 CCDC85CA6NKD9 419 aa23.59■■□□□ 1.37
COMMD1-207ENST00000471704 TM4SF4P48230 202 aa23.59■■□□□ 1.37
COMMD1-207ENST00000471704 ARMC9Q7Z3E5 817 aa23.59■■□□□ 1.37
COMMD1-207ENST00000471704 FBXO33Q7Z6M2 555 aa23.59■■□□□ 1.37
COMMD1-207ENST00000471704 MEIS3Q99687 375 aa23.59■■□□□ 1.37
COMMD1-207ENST00000471704 PPP2R3BQ9Y5P8 575 aa23.59■■□□□ 1.37
COMMD1-207ENST00000471704 UBTFL1P0CB47 393 aaPredicted RBP23.58■■□□□ 1.37
COMMD1-207ENST00000471704 METTL24Q5JXM2 366 aa23.58■■□□□ 1.37
COMMD1-207ENST00000471704 SSC5DA1L4H1 1573 aa23.57■■□□□ 1.36
COMMD1-207ENST00000471704 PDE8BO95263 885 aa23.57■■□□□ 1.36
COMMD1-207ENST00000471704 RGS19P49795 217 aa23.57■■□□□ 1.36
COMMD1-207ENST00000471704 MAP3K11Q16584 847 aa23.57■■□□□ 1.36
COMMD1-207ENST00000471704 MFSD14BQ5SR56 506 aa23.57■■□□□ 1.36
COMMD1-207ENST00000471704 INTS3Q68E01 1043 aaKnown RBP23.57■■□□□ 1.36
COMMD1-207ENST00000471704 LRRFIP2Q9Y608 721 aaKnown RBP23.57■■□□□ 1.36
COMMD1-207ENST00000471704 CLRN2A0PK11 232 aa23.56■■□□□ 1.36
COMMD1-207ENST00000471704 MYO1BO43795 1136 aa23.56■■□□□ 1.36
COMMD1-207ENST00000471704 TRIM27P14373 513 aa23.56■■□□□ 1.36
COMMD1-207ENST00000471704 PRKG1Q13976 671 aa23.56■■□□□ 1.36
COMMD1-207ENST00000471704 SERPINA10Q9UK55 444 aa23.56■■□□□ 1.36
COMMD1-207ENST00000471704 ANGEL1Q9UNK9 670 aaKnown RBP23.56■■□□□ 1.36
COMMD1-207ENST00000471704 FGFR2P21802 821 aa23.55■■□□□ 1.36
COMMD1-207ENST00000471704 ATG9AQ7Z3C6 839 aa23.55■■□□□ 1.36
COMMD1-207ENST00000471704 TTF2Q9UNY4 1162 aaKnown RBP23.55■■□□□ 1.36
COMMD1-207ENST00000471704 FZD1Q9UP38 647 aa23.55■■□□□ 1.36
COMMD1-207ENST00000471704 EYA2O00167 538 aa23.54■■□□□ 1.36
COMMD1-207ENST00000471704 SPRYD7Q5W111 196 aa23.54■■□□□ 1.36
COMMD1-207ENST00000471704 RBM5P52756 815 aaKnown RBP eCLIP23.53■■□□□ 1.36
COMMD1-207ENST00000471704 SUPT20HL1Q3ZLR7 823 aa23.53■■□□□ 1.36
COMMD1-207ENST00000471704 SPDYE2Q495Y8 402 aa23.53■■□□□ 1.36
COMMD1-207ENST00000471704 ATF7IPQ6VMQ6 1270 aa23.53■■□□□ 1.36
COMMD1-207ENST00000471704 VEZTQ9HBM0 779 aa23.53■■□□□ 1.36
COMMD1-207ENST00000471704 UNCXA6NJT0 531 aa23.52■■□□□ 1.36
COMMD1-207ENST00000471704 PPP1R12BO60237 982 aaPredicted RBP23.52■■□□□ 1.36
COMMD1-207ENST00000471704 MKRN3Q13064 507 aaKnown RBP23.52■■□□□ 1.36
COMMD1-207ENST00000471704 RASA3Q14644 834 aa23.52■■□□□ 1.36
COMMD1-207ENST00000471704 GRIK5Q16478 980 aa23.52■■□□□ 1.36
COMMD1-207ENST00000471704 NBPF12Q5TAG4 269 aaPredicted RBP23.52■■□□□ 1.36
COMMD1-207ENST00000471704 FRAT1Q92837 279 aaPredicted RBP23.52■■□□□ 1.36
COMMD1-207ENST00000471704 ZNF70Q9UC06 446 aaPredicted RBP23.52■■□□□ 1.36
COMMD1-207ENST00000471704 IQSEC3Q9UPP2 1182 aaPredicted RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms