RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 ZBTB7BO15156 539 aaPredicted RBP15.49■□□□□ 0.07
LINC00888-202ENST00000471496 SCNN1DP51172 638 aa15.49■□□□□ 0.07
LINC00888-202ENST00000471496 MTX1Q13505 466 aa15.49■□□□□ 0.07
LINC00888-202ENST00000471496 FTSJ3Q8IY81 847 aaKnown RBP15.49■□□□□ 0.07
LINC00888-202ENST00000471496 MFRPQ9BY79 579 aa15.49■□□□□ 0.07
LINC00888-202ENST00000471496 GJA3Q9Y6H8 435 aa15.49■□□□□ 0.07
LINC00888-202ENST00000471496 TOMM70O94826 608 aa15.48■□□□□ 0.07
LINC00888-202ENST00000471496 C1QTNF8P60827 252 aa15.48■□□□□ 0.07
LINC00888-202ENST00000471496 CIAPIN1Q6FI81 312 aa15.48■□□□□ 0.07
LINC00888-202ENST00000471496 C15orf52Q6ZUT6 534 aaKnown RBP15.48■□□□□ 0.07
LINC00888-202ENST00000471496 VGLL2Q8N8G2 317 aa15.48■□□□□ 0.07
LINC00888-202ENST00000471496 HDAC5Q9UQL6 1122 aa15.48■□□□□ 0.07
LINC00888-202ENST00000471496 ATG9AQ7Z3C6 839 aa15.47■□□□□ 0.07
LINC00888-202ENST00000471496 TAF1DQ9H5J8 278 aaPredicted RBP15.47■□□□□ 0.07
LINC00888-202ENST00000471496 PSMD14O00487 310 aa15.46■□□□□ 0.07
LINC00888-202ENST00000471496 GNAI2P04899 355 aa15.46■□□□□ 0.07
LINC00888-202ENST00000471496 ITPRIPQ8IWB1 547 aa15.46■□□□□ 0.07
LINC00888-202ENST00000471496 MROH5Q6ZUA9 1318 aa15.46■□□□□ 0.07
LINC00888-202ENST00000471496 IQCA1LA6NCM1 817 aa15.46■□□□□ 0.06
LINC00888-202ENST00000471496 EYA2O00167 538 aa15.46■□□□□ 0.06
LINC00888-202ENST00000471496 EPS15P42566 896 aa15.46■□□□□ 0.06
LINC00888-202ENST00000471496 GMPSP49915 693 aaPredicted RBP15.46■□□□□ 0.06
LINC00888-202ENST00000471496 TNIP1Q15025 636 aa15.46■□□□□ 0.06
LINC00888-202ENST00000471496 C20orf194Q5TEA3 1177 aa15.46■□□□□ 0.06
LINC00888-202ENST00000471496 PODNQ7Z5L7 613 aa15.46■□□□□ 0.06
LINC00888-202ENST00000471496 RBM46Q8TBY0 533 aaKnown RBP15.46■□□□□ 0.06
LINC00888-202ENST00000471496 COPRSQ9NQ92 184 aa15.46■□□□□ 0.06
LINC00888-202ENST00000471496 HACL1Q9UJ83 578 aa15.46■□□□□ 0.06
LINC00888-202ENST00000471496 PA2G4Q9UQ80 394 aaKnown RBP15.46■□□□□ 0.06
LINC00888-202ENST00000471496 ZNF609O15014 1411 aa15.45■□□□□ 0.06
LINC00888-202ENST00000471496 PNMA6EA0A0J9YXQ4 647 aa15.45■□□□□ 0.06
LINC00888-202ENST00000471496 VIL1P09327 827 aaKnown RBP15.45■□□□□ 0.06
LINC00888-202ENST00000471496 UBE4AQ14139 1066 aa15.45■□□□□ 0.06
LINC00888-202ENST00000471496 HS6ST3Q8IZP7 471 aa15.45■□□□□ 0.06
LINC00888-202ENST00000471496 COA1Q9GZY4 146 aa15.45■□□□□ 0.06
LINC00888-202ENST00000471496 GPRC5DQ9NZD1 345 aa15.45■□□□□ 0.06
LINC00888-202ENST00000471496 SHTN1A0MZ66 631 aa15.44■□□□□ 0.06
LINC00888-202ENST00000471496 SRGAP3O43295 1099 aa15.44■□□□□ 0.06
LINC00888-202ENST00000471496 CIAO1O76071 339 aa15.44■□□□□ 0.06
LINC00888-202ENST00000471496 PDE8BO95263 885 aa15.44■□□□□ 0.06
LINC00888-202ENST00000471496 EPHX2P34913 555 aa15.44■□□□□ 0.06
LINC00888-202ENST00000471496 KCNJ4P48050 445 aa15.44■□□□□ 0.06
LINC00888-202ENST00000471496 MVPQ14764 893 aaKnown RBP15.44■□□□□ 0.06
LINC00888-202ENST00000471496 METTL24Q5JXM2 366 aa15.44■□□□□ 0.06
LINC00888-202ENST00000471496 C1orf115Q9H7X2 142 aa15.44■□□□□ 0.06
LINC00888-202ENST00000471496 PLSCR2Q9NRY7 297 aa15.44■□□□□ 0.06
LINC00888-202ENST00000471496 MS4A1P11836 297 aa15.43■□□□□ 0.06
LINC00888-202ENST00000471496 FGFR2P21802 821 aa15.43■□□□□ 0.06
LINC00888-202ENST00000471496 C16orf71Q8IYS4 520 aaPredicted RBP15.43■□□□□ 0.06
LINC00888-202ENST00000471496 ARAP2Q8WZ64 1704 aa15.43■□□□□ 0.06
LINC00888-202ENST00000471496 SIL1Q9H173 461 aa15.43■□□□□ 0.06
LINC00888-202ENST00000471496 CD209Q9NNX6 404 aa15.43■□□□□ 0.06
LINC00888-202ENST00000471496 COG6Q9Y2V7 657 aa15.43■□□□□ 0.06
LINC00888-202ENST00000471496 PDE3AQ14432 1141 aa15.42■□□□□ 0.06
LINC00888-202ENST00000471496 DPF2Q92785 391 aa15.42■□□□□ 0.06
LINC00888-202ENST00000471496 GMLQ99445 158 aa15.42■□□□□ 0.06
LINC00888-202ENST00000471496 USP17L3A6NCW0 530 aa15.41■□□□□ 0.06
LINC00888-202ENST00000471496 USP17L4A6NCW7 530 aa15.41■□□□□ 0.06
LINC00888-202ENST00000471496 IL1R1P14778 569 aa15.41■□□□□ 0.06
LINC00888-202ENST00000471496 DACT2Q5SW24 774 aa15.41■□□□□ 0.06
LINC00888-202ENST00000471496 USP17L1Q7RTZ2 530 aa15.41■□□□□ 0.06
LINC00888-202ENST00000471496 FAM84BQ96KN1 310 aaPredicted RBP15.41■□□□□ 0.06
LINC00888-202ENST00000471496 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.41■□□□□ 0.06
LINC00888-202ENST00000471496 RPS12P25398 132 aaKnown RBP15.4■□□□□ 0.06
LINC00888-202ENST00000471496 LMOD1P29536 600 aaPredicted RBP15.4■□□□□ 0.06
LINC00888-202ENST00000471496 GYG1P46976 350 aa15.4■□□□□ 0.06
LINC00888-202ENST00000471496 ATP8B2P98198 1209 aa15.4■□□□□ 0.06
LINC00888-202ENST00000471496 FSTL1Q12841 308 aa15.4■□□□□ 0.06
LINC00888-202ENST00000471496 RSBN1LQ6PCB5 846 aaPredicted RBP15.4■□□□□ 0.06
LINC00888-202ENST00000471496 SSH3Q8TE77 659 aa15.4■□□□□ 0.06
LINC00888-202ENST00000471496 MXD3Q9BW11 206 aa15.4■□□□□ 0.06
LINC00888-202ENST00000471496 ZBTB40Q9NUA8 1239 aa15.4■□□□□ 0.06
LINC00888-202ENST00000471496 CNOT7Q9UIV1 285 aaKnown RBP15.4■□□□□ 0.06
LINC00888-202ENST00000471496 MYH13Q9UKX3 1938 aa15.4■□□□□ 0.06
LINC00888-202ENST00000471496 EGFRP00533 1210 aa15.4■□□□□ 0.06
LINC00888-202ENST00000471496 IL15P40933 162 aaPredicted RBP15.4■□□□□ 0.06
LINC00888-202ENST00000471496 HIRAP54198 1017 aaPredicted RBP15.4■□□□□ 0.06
LINC00888-202ENST00000471496 PUM3Q15397 648 aaKnown RBP15.4■□□□□ 0.06
LINC00888-202ENST00000471496 STRIP1Q5VSL9 837 aa15.4■□□□□ 0.06
LINC00888-202ENST00000471496 FBXO33Q7Z6M2 555 aa15.4■□□□□ 0.06
LINC00888-202ENST00000471496 PNMA8AQ86V59 439 aaPredicted RBP15.4■□□□□ 0.06
LINC00888-202ENST00000471496 LDHDQ86WU2 507 aa15.4■□□□□ 0.06
LINC00888-202ENST00000471496 SMC1BQ8NDV3 1235 aa15.4■□□□□ 0.06
LINC00888-202ENST00000471496 ADARB2Q9NS39 739 aaKnown RBP15.4■□□□□ 0.06
LINC00888-202ENST00000471496 CEP350Q5VT06 3117 aa15.39■□□□□ 0.05
LINC00888-202ENST00000471496 POLR2AP24928 1970 aaKnown RBP15.39■□□□□ 0.05
LINC00888-202ENST00000471496 EAPPQ56P03 285 aaPredicted RBP15.39■□□□□ 0.05
LINC00888-202ENST00000471496 CEP85Q6P2H3 762 aa15.39■□□□□ 0.05
LINC00888-202ENST00000471496 USP50Q70EL3 339 aaPredicted RBP15.39■□□□□ 0.05
LINC00888-202ENST00000471496 ZNF804AQ7Z570 1209 aa15.39■□□□□ 0.05
LINC00888-202ENST00000471496 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.39■□□□□ 0.05
LINC00888-202ENST00000471496 AGBL3Q8NEM8 1001 aa15.39■□□□□ 0.05
LINC00888-202ENST00000471496 TDRD7Q8NHU6 1098 aaKnown RBP15.39■□□□□ 0.05
LINC00888-202ENST00000471496 TRPM4Q8TD43 1214 aa15.39■□□□□ 0.05
LINC00888-202ENST00000471496 DDX19BQ9UMR2 479 aa15.39■□□□□ 0.05
LINC00888-202ENST00000471496 HIBADHP31937 336 aaKnown RBP15.38■□□□□ 0.05
LINC00888-202ENST00000471496 ZNF280AP59817 542 aaPredicted RBP15.38■□□□□ 0.05
LINC00888-202ENST00000471496 GTF2IP78347 998 aa15.38■□□□□ 0.05
LINC00888-202ENST00000471496 TTLL5Q6EMB2 1281 aa15.38■□□□□ 0.05
LINC00888-202ENST00000471496 CEP126Q9P2H0 1117 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms