RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 NOB1Q9ULX3 412 aaKnown RBP19.33■□□□□ 0.68
COL1A1-203ENST00000471344 ARAP2Q8WZ64 1704 aa19.32■□□□□ 0.68
COL1A1-203ENST00000471344 ZNF157P51786 506 aaPredicted RBP19.32■□□□□ 0.68
COL1A1-203ENST00000471344 BRPF1P55201 1214 aaPredicted RBP19.32■□□□□ 0.68
COL1A1-203ENST00000471344 ECM29Q5VYK3 1845 aa19.31■□□□□ 0.68
COL1A1-203ENST00000471344 NOGQ13253 232 aa19.31■□□□□ 0.68
COL1A1-203ENST00000471344 FAM84BQ96KN1 310 aaPredicted RBP19.31■□□□□ 0.68
COL1A1-203ENST00000471344 BEGAINQ9BUH8 593 aa19.31■□□□□ 0.68
COL1A1-203ENST00000471344 UBE4AQ14139 1066 aa19.3■□□□□ 0.68
COL1A1-203ENST00000471344 METTL24Q5JXM2 366 aa19.3■□□□□ 0.68
COL1A1-203ENST00000471344 VGLL2Q8N8G2 317 aa19.3■□□□□ 0.68
COL1A1-203ENST00000471344 HDAC9Q9UKV0 1011 aa19.3■□□□□ 0.68
COL1A1-203ENST00000471344 IQSEC3Q9UPP2 1182 aaPredicted RBP19.3■□□□□ 0.68
COL1A1-203ENST00000471344 MROH5Q6ZUA9 1318 aa19.29■□□□□ 0.68
COL1A1-203ENST00000471344 SLC10A3P09131 477 aa19.29■□□□□ 0.68
COL1A1-203ENST00000471344 RFX5P48382 616 aaPredicted RBP19.29■□□□□ 0.68
COL1A1-203ENST00000471344 RARSP54136 660 aaKnown RBP19.29■□□□□ 0.68
COL1A1-203ENST00000471344 RASAL3Q86YV0 1011 aa19.29■□□□□ 0.68
COL1A1-203ENST00000471344 MIER1Q8N108 512 aa19.29■□□□□ 0.68
COL1A1-203ENST00000471344 TDRD7Q8NHU6 1098 aaKnown RBP19.29■□□□□ 0.68
COL1A1-203ENST00000471344 CLRN2A0PK11 232 aa19.28■□□□□ 0.68
COL1A1-203ENST00000471344 UBE2Q2LH0YL09 131 aa19.28■□□□□ 0.68
COL1A1-203ENST00000471344 CT47B1P0C2W7 299 aaPredicted RBP19.28■□□□□ 0.68
COL1A1-203ENST00000471344 HIBADHP31937 336 aaKnown RBP19.28■□□□□ 0.68
COL1A1-203ENST00000471344 KIF23Q02241 960 aaPredicted RBP19.28■□□□□ 0.68
COL1A1-203ENST00000471344 DLGAP5Q15398 846 aa19.28■□□□□ 0.68
COL1A1-203ENST00000471344 GRIK5Q16478 980 aa19.28■□□□□ 0.68
COL1A1-203ENST00000471344 CFAP100Q494V2 611 aa19.28■□□□□ 0.68
COL1A1-203ENST00000471344 FZD1Q9UP38 647 aa19.28■□□□□ 0.68
COL1A1-203ENST00000471344 SSC5DA1L4H1 1573 aa19.27■□□□□ 0.68
COL1A1-203ENST00000471344 FAM205AQ6ZU69 1335 aa19.27■□□□□ 0.68
COL1A1-203ENST00000471344 PRKG1Q13976 671 aa19.27■□□□□ 0.68
COL1A1-203ENST00000471344 TNNQ9UQP3 1299 aa19.27■□□□□ 0.68
COL1A1-203ENST00000471344 SPDYE2BA6NHP3 402 aa19.26■□□□□ 0.67
COL1A1-203ENST00000471344 SPDYE6P0CI01 402 aa19.26■□□□□ 0.67
COL1A1-203ENST00000471344 FKBP1AP62942 108 aaKnown RBP19.26■□□□□ 0.67
COL1A1-203ENST00000471344 MFSD14BQ5SR56 506 aa19.26■□□□□ 0.67
COL1A1-203ENST00000471344 APOBEC3FQ8IUX4 373 aaKnown RBP19.26■□□□□ 0.67
COL1A1-203ENST00000471344 MTMR14Q8NCE2 650 aa19.26■□□□□ 0.67
COL1A1-203ENST00000471344 CCDC102AQ96A19 550 aa19.26■□□□□ 0.67
COL1A1-203ENST00000471344 PRMT6Q96LA8 375 aaPredicted RBP19.26■□□□□ 0.67
COL1A1-203ENST00000471344 CASP8AP2Q9UKL3 1982 aa19.26■□□□□ 0.67
COL1A1-203ENST00000471344 PDE8BO95263 885 aa19.25■□□□□ 0.67
COL1A1-203ENST00000471344 UBTFL1P0CB47 393 aaPredicted RBP19.25■□□□□ 0.67
COL1A1-203ENST00000471344 MMP14P50281 582 aa19.25■□□□□ 0.67
COL1A1-203ENST00000471344 FKBP1BP68106 108 aa19.25■□□□□ 0.67
COL1A1-203ENST00000471344 PTPN12Q05209 780 aaKnown RBP19.25■□□□□ 0.67
COL1A1-203ENST00000471344 CHAF1AQ13111 956 aaPredicted RBP19.25■□□□□ 0.67
COL1A1-203ENST00000471344 TTLL12Q14166 644 aaPredicted RBP19.25■□□□□ 0.67
COL1A1-203ENST00000471344 FBXO33Q7Z6M2 555 aa19.25■□□□□ 0.67
COL1A1-203ENST00000471344 MEIS3Q99687 375 aa19.25■□□□□ 0.67
COL1A1-203ENST00000471344 LRRFIP2Q9Y608 721 aaKnown RBP19.25■□□□□ 0.67
COL1A1-203ENST00000471344 BCAMP50895 628 aa19.24■□□□□ 0.67
COL1A1-203ENST00000471344 ATG9AQ7Z3C6 839 aa19.24■□□□□ 0.67
COL1A1-203ENST00000471344 API5Q9BZZ5 524 aaKnown RBP19.24■□□□□ 0.67
COL1A1-203ENST00000471344 SIL1Q9H173 461 aa19.24■□□□□ 0.67
COL1A1-203ENST00000471344 EYA2O00167 538 aa19.23■□□□□ 0.67
COL1A1-203ENST00000471344 CA12O43570 354 aa19.23■□□□□ 0.67
COL1A1-203ENST00000471344 FGFR2P21802 821 aa19.23■□□□□ 0.67
COL1A1-203ENST00000471344 RBM5P52756 815 aaKnown RBP eCLIP19.23■□□□□ 0.67
COL1A1-203ENST00000471344 DIEXFQ68CQ4 756 aaKnown RBP19.23■□□□□ 0.67
COL1A1-203ENST00000471344 CSRNP1Q96S65 589 aa19.23■□□□□ 0.67
COL1A1-203ENST00000471344 DEFB129Q9H1M3 183 aa19.23■□□□□ 0.67
COL1A1-203ENST00000471344 VEZTQ9HBM0 779 aa19.23■□□□□ 0.67
COL1A1-203ENST00000471344 TTF2Q9UNY4 1162 aaKnown RBP19.23■□□□□ 0.67
COL1A1-203ENST00000471344 COL1A1P02452 1464 aaPredicted RBP19.22■□□□□ 0.67
COL1A1-203ENST00000471344 AKAP11Q9UKA4 1901 aa19.22■□□□□ 0.67
COL1A1-203ENST00000471344 BCAR3O75815 825 aa19.22■□□□□ 0.67
COL1A1-203ENST00000471344 MKRN3Q13064 507 aaKnown RBP19.22■□□□□ 0.67
COL1A1-203ENST00000471344 VPS37DQ86XT2 251 aa19.22■□□□□ 0.67
COL1A1-203ENST00000471344 PA2G4Q9UQ80 394 aaKnown RBP19.22■□□□□ 0.67
COL1A1-203ENST00000471344 MYH13Q9UKX3 1938 aa19.21■□□□□ 0.67
COL1A1-203ENST00000471344 PUM3Q15397 648 aaKnown RBP19.21■□□□□ 0.67
COL1A1-203ENST00000471344 RNF186Q9NXI6 227 aa19.21■□□□□ 0.67
COL1A1-203ENST00000471344 KIF16BQ96L93 1317 aa19.21■□□□□ 0.67
COL1A1-203ENST00000471344 TRPA1O75762 1119 aa19.2■□□□□ 0.66
COL1A1-203ENST00000471344 NF2P35240 595 aa19.2■□□□□ 0.66
COL1A1-203ENST00000471344 CDAN1Q8IWY9 1227 aa19.2■□□□□ 0.66
COL1A1-203ENST00000471344 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.2■□□□□ 0.66
COL1A1-203ENST00000471344 ANGEL1Q9UNK9 670 aaKnown RBP19.2■□□□□ 0.66
COL1A1-203ENST00000471344 TRIM27P14373 513 aa19.19■□□□□ 0.66
COL1A1-203ENST00000471344 CRKP46108 304 aa19.19■□□□□ 0.66
COL1A1-203ENST00000471344 HNRNPUQ00839 825 aaKnown RBP eCLIP19.19■□□□□ 0.66
COL1A1-203ENST00000471344 CAVIN4Q5BKX8 364 aa19.19■□□□□ 0.66
COL1A1-203ENST00000471344 NBPF12Q5TAG4 269 aaPredicted RBP19.19■□□□□ 0.66
COL1A1-203ENST00000471344 INTS3Q68E01 1043 aaKnown RBP19.19■□□□□ 0.66
COL1A1-203ENST00000471344 ABHD8Q96I13 439 aa19.19■□□□□ 0.66
COL1A1-203ENST00000471344 TDRD3Q9H7E2 651 aaKnown RBP19.19■□□□□ 0.66
COL1A1-203ENST00000471344 OTOFQ9HC10 1997 aa19.19■□□□□ 0.66
COL1A1-203ENST00000471344 MYO1BO43795 1136 aa19.18■□□□□ 0.66
COL1A1-203ENST00000471344 FRAT2O75474 233 aaPredicted RBP19.18■□□□□ 0.66
COL1A1-203ENST00000471344 SPDYE2Q495Y8 402 aa19.18■□□□□ 0.66
COL1A1-203ENST00000471344 DZIP1LQ8IYY4 767 aaKnown RBP19.18■□□□□ 0.66
COL1A1-203ENST00000471344 FRAT1Q92837 279 aaPredicted RBP19.18■□□□□ 0.66
COL1A1-203ENST00000471344 CLMNQ96JQ2 1002 aa19.18■□□□□ 0.66
COL1A1-203ENST00000471344 ZNF70Q9UC06 446 aaPredicted RBP19.18■□□□□ 0.66
COL1A1-203ENST00000471344 SERPINA10Q9UK55 444 aa19.18■□□□□ 0.66
COL1A1-203ENST00000471344 IFIT1P09914 478 aaKnown RBP19.17■□□□□ 0.66
COL1A1-203ENST00000471344 SLC5A1P13866 664 aa19.17■□□□□ 0.66
COL1A1-203ENST00000471344 RASA3Q14644 834 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms