RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 DACT2Q5SW24 774 aa12.1□□□□□ -0.47
SF3A1-207ENST00000471342 SPATA5Q8NB90 893 aa12.1□□□□□ -0.47
SF3A1-207ENST00000471342 DBNDD1Q9H9R9 158 aa12.1□□□□□ -0.47
SF3A1-207ENST00000471342 SEC24BO95487 1268 aa12.09□□□□□ -0.47
SF3A1-207ENST00000471342 IARSP41252 1262 aaKnown RBP12.09□□□□□ -0.47
SF3A1-207ENST00000471342 ADGRA1Q86SQ6 560 aa12.09□□□□□ -0.47
SF3A1-207ENST00000471342 SEMA3EO15041 775 aa12.08□□□□□ -0.48
SF3A1-207ENST00000471342 ECE2O60344 883 aa12.08□□□□□ -0.48
SF3A1-207ENST00000471342 VIL1P09327 827 aaKnown RBP12.08□□□□□ -0.48
SF3A1-207ENST00000471342 UQCRFS1P1P0C7P4 283 aa12.08□□□□□ -0.48
SF3A1-207ENST00000471342 PRDX5P30044 214 aa12.08□□□□□ -0.48
SF3A1-207ENST00000471342 CXCL9Q07325 125 aa12.08□□□□□ -0.48
SF3A1-207ENST00000471342 SOGA3Q5TF21 947 aa12.08□□□□□ -0.48
SF3A1-207ENST00000471342 PODNQ7Z5L7 613 aa12.08□□□□□ -0.48
SF3A1-207ENST00000471342 KBTBD3Q8NAB2 608 aa12.08□□□□□ -0.48
SF3A1-207ENST00000471342 BCL11AQ9H165 835 aa12.08□□□□□ -0.48
SF3A1-207ENST00000471342 TAOK3Q9H2K8 898 aa12.08□□□□□ -0.48
SF3A1-207ENST00000471342 JAG2Q9Y219 1238 aa12.08□□□□□ -0.48
SF3A1-207ENST00000471342 GOLIM4O00461 696 aa12.07□□□□□ -0.48
SF3A1-207ENST00000471342 CHMLP26374 656 aa12.07□□□□□ -0.48
SF3A1-207ENST00000471342 CCDC158Q5M9N0 1113 aa12.07□□□□□ -0.48
SF3A1-207ENST00000471342 TTC39AQ5SRH9 613 aa12.07□□□□□ -0.48
SF3A1-207ENST00000471342 ZC3H12CQ9C0D7 883 aaKnown RBP12.07□□□□□ -0.48
SF3A1-207ENST00000471342 PAG1Q9NWQ8 432 aa12.07□□□□□ -0.48
SF3A1-207ENST00000471342 PCDHAC2Q9Y5I4 1007 aa12.07□□□□□ -0.48
SF3A1-207ENST00000471342 ZNF541Q9H0D2 1346 aa12.07□□□□□ -0.48
SF3A1-207ENST00000471342 SHTN1A0MZ66 631 aa12.06□□□□□ -0.48
SF3A1-207ENST00000471342 PPIP5K2O43314 1243 aa12.06□□□□□ -0.48
SF3A1-207ENST00000471342 ADD2P35612 726 aa12.06□□□□□ -0.48
SF3A1-207ENST00000471342 GTF2IP78347 998 aa12.06□□□□□ -0.48
SF3A1-207ENST00000471342 CAVIN4Q5BKX8 364 aa12.06□□□□□ -0.48
SF3A1-207ENST00000471342 STRIP1Q5VSL9 837 aa12.06□□□□□ -0.48
SF3A1-207ENST00000471342 SUPT20HQ8NEM7 779 aa12.06□□□□□ -0.48
SF3A1-207ENST00000471342 OSBP2Q969R2 916 aa12.06□□□□□ -0.48
SF3A1-207ENST00000471342 NSUN4Q96CB9 384 aaKnown RBP12.06□□□□□ -0.48
SF3A1-207ENST00000471342 ZBED3Q96IU2 234 aaPredicted RBP12.06□□□□□ -0.48
SF3A1-207ENST00000471342 SEC62Q99442 399 aaKnown RBP12.06□□□□□ -0.48
SF3A1-207ENST00000471342 EYA3Q99504 573 aa12.06□□□□□ -0.48
SF3A1-207ENST00000471342 DENND2AQ9ULE3 1009 aa12.06□□□□□ -0.48
SF3A1-207ENST00000471342 ERC2O15083 957 aa12.05□□□□□ -0.48
SF3A1-207ENST00000471342 KCNJ4P48050 445 aa12.05□□□□□ -0.48
SF3A1-207ENST00000471342 FKBP1AP62942 108 aaKnown RBP12.05□□□□□ -0.48
SF3A1-207ENST00000471342 ARHGAP27Q6ZUM4 889 aa12.05□□□□□ -0.48
SF3A1-207ENST00000471342 ZNF804AQ7Z570 1209 aa12.05□□□□□ -0.48
SF3A1-207ENST00000471342 EVI5LQ96CN4 794 aa12.05□□□□□ -0.48
SF3A1-207ENST00000471342 FAM227BQ96M60 508 aa12.05□□□□□ -0.48
SF3A1-207ENST00000471342 ZNRF3Q9ULT6 936 aa12.05□□□□□ -0.48
SF3A1-207ENST00000471342 DOCK2Q92608 1830 aa12.04□□□□□ -0.48
SF3A1-207ENST00000471342 SBF1O95248 1867 aa12.04□□□□□ -0.48
SF3A1-207ENST00000471342 A0A0D9SFI3 127 aa12.04□□□□□ -0.48
SF3A1-207ENST00000471342 POTECB2RU33 542 aa12.04□□□□□ -0.48
SF3A1-207ENST00000471342 PSMD14O00487 310 aa12.04□□□□□ -0.48
SF3A1-207ENST00000471342 MECOMQ03112 1051 aa12.04□□□□□ -0.48
SF3A1-207ENST00000471342 ZMYM1Q5SVZ6 1142 aa12.04□□□□□ -0.48
SF3A1-207ENST00000471342 ZNF589Q86UQ0 364 aaPredicted RBP12.04□□□□□ -0.48
SF3A1-207ENST00000471342 FAM163AQ96GL9 167 aaPredicted RBP12.04□□□□□ -0.48
SF3A1-207ENST00000471342 DNAJC2Q99543 621 aaKnown RBP12.04□□□□□ -0.48
SF3A1-207ENST00000471342 RIOK1Q9BRS2 568 aaKnown RBP12.04□□□□□ -0.48
SF3A1-207ENST00000471342 RFX7Q2KHR2 1363 aa12.04□□□□□ -0.48
SF3A1-207ENST00000471342 USP17L3A6NCW0 530 aa12.03□□□□□ -0.48
SF3A1-207ENST00000471342 USP17L4A6NCW7 530 aa12.03□□□□□ -0.48
SF3A1-207ENST00000471342 RAD17O75943 681 aa12.03□□□□□ -0.48
SF3A1-207ENST00000471342 EGFRP00533 1210 aa12.03□□□□□ -0.48
SF3A1-207ENST00000471342 PDE6AP16499 860 aa12.03□□□□□ -0.48
SF3A1-207ENST00000471342 LMNB1P20700 586 aa12.03□□□□□ -0.48
SF3A1-207ENST00000471342 TTLL5Q6EMB2 1281 aa12.03□□□□□ -0.48
SF3A1-207ENST00000471342 USP17L1Q7RTZ2 530 aa12.03□□□□□ -0.48
SF3A1-207ENST00000471342 TICAM2Q86XR7 235 aa12.03□□□□□ -0.48
SF3A1-207ENST00000471342 POTEDQ86YR6 584 aa12.03□□□□□ -0.48
SF3A1-207ENST00000471342 LARGE2Q8N3Y3 721 aa12.03□□□□□ -0.48
SF3A1-207ENST00000471342 PUS7LQ9H0K6 701 aaKnown RBP12.03□□□□□ -0.48
SF3A1-207ENST00000471342 MKRN1Q9UHC7 482 aaKnown RBP12.03□□□□□ -0.48
SF3A1-207ENST00000471342 ZBTB12Q9Y330 459 aaPredicted RBP12.03□□□□□ -0.48
SF3A1-207ENST00000471342 MYO5AQ9Y4I1 1855 aaKnown RBP12.03□□□□□ -0.48
SF3A1-207ENST00000471342 GAKO14976 1311 aa12.03□□□□□ -0.48
SF3A1-207ENST00000471342 PSME4Q14997 1843 aa12.02□□□□□ -0.48
SF3A1-207ENST00000471342 M0R2C6 588 aa12.02□□□□□ -0.49
SF3A1-207ENST00000471342 SGSM2O43147 1006 aa12.02□□□□□ -0.49
SF3A1-207ENST00000471342 RHBDL3P58872 404 aa12.02□□□□□ -0.49
SF3A1-207ENST00000471342 CHAF1AQ13111 956 aaPredicted RBP12.02□□□□□ -0.49
SF3A1-207ENST00000471342 COL9A3Q14050 684 aaPredicted RBP12.02□□□□□ -0.49
SF3A1-207ENST00000471342 UBE3CQ15386 1083 aa12.02□□□□□ -0.49
SF3A1-207ENST00000471342 GORABQ5T7V8 394 aa12.02□□□□□ -0.49
SF3A1-207ENST00000471342 C9orf131Q5VYM1 1079 aa12.02□□□□□ -0.49
SF3A1-207ENST00000471342 RSBN1LQ6PCB5 846 aaPredicted RBP12.02□□□□□ -0.49
SF3A1-207ENST00000471342 WDR66Q8TBY9 1149 aa12.02□□□□□ -0.49
SF3A1-207ENST00000471342 MRIQ9BWK5 157 aa12.02□□□□□ -0.49
SF3A1-207ENST00000471342 SMIM22K7EJ46 135 aa12.01□□□□□ -0.49
SF3A1-207ENST00000471342 RNF113AO15541 343 aaKnown RBP12.01□□□□□ -0.49
SF3A1-207ENST00000471342 SCNN1DP51172 638 aa12.01□□□□□ -0.49
SF3A1-207ENST00000471342 ZNF280AP59817 542 aaPredicted RBP12.01□□□□□ -0.49
SF3A1-207ENST00000471342 NMIQ13287 307 aaPredicted RBP12.01□□□□□ -0.49
SF3A1-207ENST00000471342 DIXDC1Q155Q3 683 aa12.01□□□□□ -0.49
SF3A1-207ENST00000471342 MFSD14BQ5SR56 506 aa12.01□□□□□ -0.49
SF3A1-207ENST00000471342 APOBEC3HQ6NTF7 200 aaKnown RBP12.01□□□□□ -0.49
SF3A1-207ENST00000471342 CCDC129Q6ZRS4 1044 aa12.01□□□□□ -0.49
SF3A1-207ENST00000471342 BACH2Q9BYV9 841 aa12.01□□□□□ -0.49
SF3A1-207ENST00000471342 GNL3LQ9NVN8 582 aaKnown RBP12.01□□□□□ -0.49
SF3A1-207ENST00000471342 TACC3Q9Y6A5 838 aa12.01□□□□□ -0.49
SF3A1-207ENST00000471342 MAST3O60307 1309 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms