RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 PDZD8Q8NEN9 1154 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 KIF1BPQ96EK5 621 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 GBP5Q96PP8 586 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 DDX21Q9NR30 783 aaKnown RBP eCLIP7.74□□□□□ -1.17
BRCA1-210ENST00000471181 KRT3P12035 628 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 CCT6AP40227 531 aaKnown RBP7.74□□□□□ -1.17
BRCA1-210ENST00000471181 ZNF165P49910 485 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 PICALMQ13492 652 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 KRBA2Q6ZNG9 492 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 ZC4H2Q9NQZ6 224 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 ORC3Q9UBD5 711 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-210ENST00000471181 SPDYE16A6NNV3 312 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-210ENST00000471181 HNRNPCL2B2RXH8 293 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 I3L4J1 428 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 HNRNPCL1O60812 293 aaKnown RBP7.74□□□□□ -1.17
BRCA1-210ENST00000471181 GLRX3O76003 335 aaKnown RBP7.74□□□□□ -1.17
BRCA1-210ENST00000471181 BAG3O95817 575 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 SLC8A3P57103 927 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 TNNC1P63316 161 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 KRT83P78385 493 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 UBXN1Q04323 297 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 SPDYE2Q495Y8 402 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 RILPL1Q5EBL4 403 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 DCAF17Q5H9S7 520 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-210ENST00000471181 ZNF569Q5MCW4 686 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 HAUS8Q9BT25 410 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 LZTFL1Q9NQ48 299 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 ITM2BQ9Y287 266 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 RUSC2Q8N2Y8 1516 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 SYF2O95926 243 aaKnown RBP7.74□□□□□ -1.17
BRCA1-210ENST00000471181 USH1CQ9Y6N9 552 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 PLEKHH1Q9ULM0 1364 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 CLASP1Q7Z460 1538 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 SAMD9Q5K651 1589 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 OPHN1O60890 802 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 SKILP12757 684 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 HHATQ5VTY9 493 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 CASC4Q6P4E1 433 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 ANLNQ9NQW6 1124 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 TPX2Q9ULW0 747 aaKnown RBP7.74□□□□□ -1.17
BRCA1-210ENST00000471181 LIMCH1Q9UPQ0 1083 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 CCDC38Q502W7 563 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 NEK1Q96PY6 1258 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 KRT86O43790 486 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 TSTA3Q13630 321 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-210ENST00000471181 ZBTB41Q5SVQ8 909 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 NXNQ6DKJ4 435 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 GABPB2Q8TAK5 448 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-210ENST00000471181 GTF3C6Q969F1 213 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 SPDL1Q96EA4 605 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 CCDC42Q96M95 316 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 PKD2L1Q9P0L9 805 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 LPXNO60711 386 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 ZRANB2O95218 330 aaKnown RBP eCLIP7.73□□□□□ -1.17
BRCA1-210ENST00000471181 SYT1P21579 422 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 CASP2P42575 452 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 VAV2P52735 878 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 BIRC3Q13489 604 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 PDE3AQ14432 1141 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 RPS6KA2Q15349 733 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 ARFGAP2Q8N6H7 521 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 NSMCE1Q8WV22 266 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 RASSF4Q9H2L5 321 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 SFMBT1Q9UHJ3 866 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 FAF1Q9UNN5 650 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-210ENST00000471181 NOD1Q9Y239 953 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 PALM3A6NDB9 673 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-210ENST00000471181 CHMP2AO43633 222 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 GPTP24298 496 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 RNASE9P60153 205 aaKnown RBP7.73□□□□□ -1.17
BRCA1-210ENST00000471181 SPOUT1Q5T280 376 aaKnown RBP7.73□□□□□ -1.17
BRCA1-210ENST00000471181 TMTC4Q5T4D3 741 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 GIMAP6Q6P9H5 292 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 TXNDC2Q86VQ3 553 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 VSIG1Q86XK7 387 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 CCDC125Q86Z20 511 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 RILPQ96NA2 401 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 C6orf50Q9HD87 102 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 STX8Q9UNK0 236 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 TRIM35Q9UPQ4 493 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 HMGB1P1B2RPK0 211 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-210ENST00000471181 SPOPO43791 374 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 STX10O60499 249 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 PPP2R1AP30153 589 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 NAPAP54920 295 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 ANO6Q4KMQ2 910 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 CYB5RLQ6IPT4 315 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 RNF10Q8N5U6 811 aaKnown RBP7.73□□□□□ -1.17
BRCA1-210ENST00000471181 AOPEPQ8N6M6 819 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 DHX58Q96C10 678 aa7.73□□□□□ -1.17
BRCA1-210ENST00000471181 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.73□□□□□ -1.17
BRCA1-210ENST00000471181 BZW2Q9Y6E2 419 aaKnown RBP7.73□□□□□ -1.17
BRCA1-210ENST00000471181 ESYT2A0FGR8 921 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 PSMA7O14818 248 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 IGSF3O75054 1194 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 PDCD2Q16342 344 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-210ENST00000471181 TRIM68Q6AZZ1 485 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 JADE1Q6IE81 842 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 SNRKQ9NRH2 765 aa7.72□□□□□ -1.17
BRCA1-210ENST00000471181 STK38LQ9Y2H1 464 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms