RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 NOS3P29474 1203 aa8.81□□□□□ -1
GPNMB-208ENST00000470994 SCG3Q8WXD2 468 aaKnown RBP8.81□□□□□ -1
GPNMB-208ENST00000470994 MKRN1Q9UHC7 482 aaKnown RBP8.81□□□□□ -1
GPNMB-208ENST00000470994 C21orf2O43822 256 aa8.8□□□□□ -1
GPNMB-208ENST00000470994 PRR23CQ6ZRP0 262 aa8.8□□□□□ -1
GPNMB-208ENST00000470994 DCAF11Q8TEB1 546 aa8.8□□□□□ -1
GPNMB-208ENST00000470994 RNF17Q9BXT8 1623 aaKnown RBP8.8□□□□□ -1
GPNMB-208ENST00000470994 PTPN23Q9H3S7 1636 aa8.8□□□□□ -1
GPNMB-208ENST00000470994 ANKRD50Q9ULJ7 1429 aa8.8□□□□□ -1
GPNMB-208ENST00000470994 ARHGAP23Q9P227 1491 aa8.79□□□□□ -1
GPNMB-208ENST00000470994 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.79□□□□□ -1
GPNMB-208ENST00000470994 TTC9Q92623 222 aa8.79□□□□□ -1
GPNMB-208ENST00000470994 LPIN3Q9BQK8 851 aa8.79□□□□□ -1
GPNMB-208ENST00000470994 C11orf16Q9NQ32 467 aa8.79□□□□□ -1
GPNMB-208ENST00000470994 SLAIN2Q9P270 581 aa8.79□□□□□ -1
GPNMB-208ENST00000470994 DEPDC5O75140 1603 aa8.78□□□□□ -1
GPNMB-208ENST00000470994 MROH1Q8NDA8 1641 aa8.78□□□□□ -1
GPNMB-208ENST00000470994 MED1Q15648 1581 aaPredicted RBP8.78□□□□□ -1
GPNMB-208ENST00000470994 MSH6P52701 1360 aa8.77□□□□□ -1.01
GPNMB-208ENST00000470994 EIF2AK4Q9P2K8 1649 aaKnown RBP8.77□□□□□ -1.01
GPNMB-208ENST00000470994 SLIT1O75093 1534 aa8.77□□□□□ -1.01
GPNMB-208ENST00000470994 SEC13P55735 322 aa8.77□□□□□ -1.01
GPNMB-208ENST00000470994 PERM1Q5SV97 790 aa8.77□□□□□ -1.01
GPNMB-208ENST00000470994 DHX32Q7L7V1 743 aaKnown RBP8.77□□□□□ -1.01
GPNMB-208ENST00000470994 TRPM4Q8TD43 1214 aa8.77□□□□□ -1.01
GPNMB-208ENST00000470994 MEGF10Q96KG7 1140 aa8.77□□□□□ -1.01
GPNMB-208ENST00000470994 RGS17Q9UGC6 210 aaPredicted RBP8.77□□□□□ -1.01
GPNMB-208ENST00000470994 IQGAP1P46940 1657 aa8.77□□□□□ -1.01
GPNMB-208ENST00000470994 FAM135BQ49AJ0 1406 aa8.77□□□□□ -1.01
GPNMB-208ENST00000470994 NUP155O75694 1391 aa8.76□□□□□ -1.01
GPNMB-208ENST00000470994 CFAP65Q6ZU64 1925 aaKnown RBP8.76□□□□□ -1.01
GPNMB-208ENST00000470994 EFCAB6Q5THR3 1501 aa8.76□□□□□ -1.01
GPNMB-208ENST00000470994 ATF3P18847 181 aa8.76□□□□□ -1.01
GPNMB-208ENST00000470994 FSTP19883 344 aa8.76□□□□□ -1.01
GPNMB-208ENST00000470994 TXKP42681 527 aa8.76□□□□□ -1.01
GPNMB-208ENST00000470994 GPLD1P80108 840 aa8.76□□□□□ -1.01
GPNMB-208ENST00000470994 GRIK5Q16478 980 aa8.76□□□□□ -1.01
GPNMB-208ENST00000470994 ZNF326Q5BKZ1 582 aaKnown RBP8.76□□□□□ -1.01
GPNMB-208ENST00000470994 KRTAP19-1Q8IUB9 90 aa8.76□□□□□ -1.01
GPNMB-208ENST00000470994 AKTIPQ9H8T0 292 aa8.76□□□□□ -1.01
GPNMB-208ENST00000470994 TBX22Q9Y458 520 aa8.76□□□□□ -1.01
GPNMB-208ENST00000470994 NOS1P29475 1434 aa8.76□□□□□ -1.01
GPNMB-208ENST00000470994 RIMS2Q9UQ26 1411 aa8.76□□□□□ -1.01
GPNMB-208ENST00000470994 POLR1AO95602 1720 aaPredicted RBP8.76□□□□□ -1.01
GPNMB-208ENST00000470994 ZC3H13Q5T200 1668 aaKnown RBP8.75□□□□□ -1.01
GPNMB-208ENST00000470994 PRDM15P57071 1507 aaPredicted RBP8.75□□□□□ -1.01
GPNMB-208ENST00000470994 PTCD1O75127 700 aaKnown RBP8.75□□□□□ -1.01
GPNMB-208ENST00000470994 RARAP10276 462 aa8.75□□□□□ -1.01
GPNMB-208ENST00000470994 ARSDP51689 593 aa8.75□□□□□ -1.01
GPNMB-208ENST00000470994 MEX3CQ5U5Q3 659 aaKnown RBP8.75□□□□□ -1.01
GPNMB-208ENST00000470994 MRPL18Q9H0U6 180 aaKnown RBP8.75□□□□□ -1.01
GPNMB-208ENST00000470994 DMGDHQ9UI17 866 aaKnown RBP8.75□□□□□ -1.01
GPNMB-208ENST00000470994 CEP152O94986 1710 aa8.74□□□□□ -1.01
GPNMB-208ENST00000470994 RASA1P20936 1047 aa8.74□□□□□ -1.01
GPNMB-208ENST00000470994 IDH3AP50213 366 aa8.74□□□□□ -1.01
GPNMB-208ENST00000470994 HDGFL1Q5TGJ6 251 aa8.74□□□□□ -1.01
GPNMB-208ENST00000470994 KRT25Q7Z3Z0 450 aa8.74□□□□□ -1.01
GPNMB-208ENST00000470994 UCN2Q96RP3 112 aa8.74□□□□□ -1.01
GPNMB-208ENST00000470994 SMG9Q9H0W8 520 aaKnown RBP8.74□□□□□ -1.01
GPNMB-208ENST00000470994 SRA1Q9HD15 236 aaKnown RBP8.74□□□□□ -1.01
GPNMB-208ENST00000470994 AMOTL2Q9Y2J4 779 aa8.74□□□□□ -1.01
GPNMB-208ENST00000470994 LMTK2Q8IWU2 1503 aa8.74□□□□□ -1.01
GPNMB-208ENST00000470994 PLEKHG1Q9ULL1 1385 aa8.73□□□□□ -1.01
GPNMB-208ENST00000470994 ALKQ9UM73 1620 aa8.73□□□□□ -1.01
GPNMB-208ENST00000470994 DLL1O00548 723 aa8.73□□□□□ -1.01
GPNMB-208ENST00000470994 GSC2O15499 205 aa8.73□□□□□ -1.01
GPNMB-208ENST00000470994 EIF2AK2P19525 551 aaKnown RBP8.73□□□□□ -1.01
GPNMB-208ENST00000470994 INPP5BP32019 993 aa8.73□□□□□ -1.01
GPNMB-208ENST00000470994 DZIP1LQ8IYY4 767 aaKnown RBP8.73□□□□□ -1.01
GPNMB-208ENST00000470994 HINFPQ9BQA5 517 aa8.73□□□□□ -1.01
GPNMB-208ENST00000470994 C19orf44Q9H6X5 657 aa8.73□□□□□ -1.01
GPNMB-208ENST00000470994 PIK3C2BO00750 1634 aa8.72□□□□□ -1.01
GPNMB-208ENST00000470994 ADGRL2O95490 1459 aa8.72□□□□□ -1.01
GPNMB-208ENST00000470994 UBR1Q8IWV7 1749 aa8.72□□□□□ -1.01
GPNMB-208ENST00000470994 POM121CA8CG34 1229 aa8.72□□□□□ -1.01
GPNMB-208ENST00000470994 SSTR4P31391 388 aa8.72□□□□□ -1.01
GPNMB-208ENST00000470994 IRAK1P51617 712 aa8.72□□□□□ -1.01
GPNMB-208ENST00000470994 NRLP54845 237 aa8.72□□□□□ -1.01
GPNMB-208ENST00000470994 MLLT1Q03111 559 aaPredicted RBP8.72□□□□□ -1.01
GPNMB-208ENST00000470994 MAP4K3Q8IVH8 894 aa8.72□□□□□ -1.01
GPNMB-208ENST00000470994 ADAMTS19Q8TE59 1207 aa8.72□□□□□ -1.01
GPNMB-208ENST00000470994 POM121Q96HA1 1249 aa8.72□□□□□ -1.01
GPNMB-208ENST00000470994 BCS1LQ9Y276 419 aa8.72□□□□□ -1.01
GPNMB-208ENST00000470994 DEAF1O75398 565 aaPredicted RBP8.71□□□□□ -1.02
GPNMB-208ENST00000470994 DKK1O94907 266 aa8.71□□□□□ -1.02
GPNMB-208ENST00000470994 IGFBP4P22692 258 aa8.71□□□□□ -1.02
GPNMB-208ENST00000470994 LARP1Q6PKG0 1096 aaKnown RBP8.71□□□□□ -1.02
GPNMB-208ENST00000470994 TMEM130Q8N3G9 435 aa8.71□□□□□ -1.02
GPNMB-208ENST00000470994 KRTAP9-9Q9BYP9 154 aa8.71□□□□□ -1.02
GPNMB-208ENST00000470994 KRTAP9-4Q9BYQ2 154 aa8.71□□□□□ -1.02
GPNMB-208ENST00000470994 RBSNQ9H1K0 784 aa8.71□□□□□ -1.02
GPNMB-208ENST00000470994 ZFATQ9P243 1243 aa8.71□□□□□ -1.02
GPNMB-208ENST00000470994 ZBTB42B2RXF5 422 aa8.7□□□□□ -1.02
GPNMB-208ENST00000470994 CD97P48960 835 aa8.7□□□□□ -1.02
GPNMB-208ENST00000470994 STRCP1A6NGW2 1772 aa8.7□□□□□ -1.02
GPNMB-208ENST00000470994 ROCK1Q13464 1354 aa8.7□□□□□ -1.02
GPNMB-208ENST00000470994 JCADQ9P266 1359 aa8.7□□□□□ -1.02
GPNMB-208ENST00000470994 RPRD2Q5VT52 1461 aaKnown RBP8.7□□□□□ -1.02
GPNMB-208ENST00000470994 SYNMO15061 1565 aa8.69□□□□□ -1.02
GPNMB-208ENST00000470994 SASH3O75995 380 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms