RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 DDX58O95786 925 aaKnown RBP13.11□□□□□ -0.31
SRGAP3-204ENST00000470951 CEBPZQ03701 1054 aaKnown RBP13.11□□□□□ -0.31
SRGAP3-204ENST00000470951 TEFQ10587 303 aa13.11□□□□□ -0.31
SRGAP3-204ENST00000470951 ARHGAP29Q52LW3 1261 aa13.11□□□□□ -0.31
SRGAP3-204ENST00000470951 ARMCX5Q6P1M9 558 aa13.11□□□□□ -0.31
SRGAP3-204ENST00000470951 UBXN4Q92575 508 aa13.11□□□□□ -0.31
SRGAP3-204ENST00000470951 SDF4Q9BRK5 362 aa13.11□□□□□ -0.31
SRGAP3-204ENST00000470951 RTEL1Q9NZ71 1219 aa13.11□□□□□ -0.31
SRGAP3-204ENST00000470951 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.11□□□□□ -0.31
SRGAP3-204ENST00000470951 KIAA1468Q9P260 1216 aa13.11□□□□□ -0.31
SRGAP3-204ENST00000470951 SALL1Q9NSC2 1324 aa13.11□□□□□ -0.31
SRGAP3-204ENST00000470951 BTBD11A6QL63 1104 aa13.11□□□□□ -0.31
SRGAP3-204ENST00000470951 GTF2A1P52655 376 aaPredicted RBP13.11□□□□□ -0.31
SRGAP3-204ENST00000470951 DHX32Q7L7V1 743 aaKnown RBP13.11□□□□□ -0.31
SRGAP3-204ENST00000470951 FCHSD1Q86WN1 690 aa13.11□□□□□ -0.31
SRGAP3-204ENST00000470951 SUCLG2Q96I99 432 aa13.11□□□□□ -0.31
SRGAP3-204ENST00000470951 XPO4Q9C0E2 1151 aaKnown RBP13.11□□□□□ -0.31
SRGAP3-204ENST00000470951 BICC1Q9H694 974 aaKnown RBP13.11□□□□□ -0.31
SRGAP3-204ENST00000470951 TLR7Q9NYK1 1049 aaKnown RBP13.11□□□□□ -0.31
SRGAP3-204ENST00000470951 RAI14Q9P0K7 980 aa13.11□□□□□ -0.31
SRGAP3-204ENST00000470951 HEG1Q9ULI3 1381 aa13.1□□□□□ -0.31
SRGAP3-204ENST00000470951 PTPDC1A2A3K4 754 aa13.1□□□□□ -0.31
SRGAP3-204ENST00000470951 ERICH4A6NGS2 130 aa13.1□□□□□ -0.31
SRGAP3-204ENST00000470951 AKAP4Q5JQC9 854 aa13.1□□□□□ -0.31
SRGAP3-204ENST00000470951 TMC6Q7Z403 805 aa13.1□□□□□ -0.31
SRGAP3-204ENST00000470951 TXLNBQ8N3L3 684 aa13.1□□□□□ -0.31
SRGAP3-204ENST00000470951 KAZALD1Q96I82 304 aa13.1□□□□□ -0.31
SRGAP3-204ENST00000470951 ORC3Q9UBD5 711 aaPredicted RBP13.1□□□□□ -0.31
SRGAP3-204ENST00000470951 EFCAB8A8MWE9 144 aa13.1□□□□□ -0.31
SRGAP3-204ENST00000470951 IKBKBO14920 756 aa13.1□□□□□ -0.31
SRGAP3-204ENST00000470951 SMC2O95347 1197 aa13.1□□□□□ -0.31
SRGAP3-204ENST00000470951 CYP21A2P08686 494 aa13.1□□□□□ -0.31
SRGAP3-204ENST00000470951 PLA2G4AP47712 749 aa13.1□□□□□ -0.31
SRGAP3-204ENST00000470951 MCMDC2Q4G0Z9 681 aa13.1□□□□□ -0.31
SRGAP3-204ENST00000470951 ICE2Q659A1 982 aa13.1□□□□□ -0.31
SRGAP3-204ENST00000470951 EP400NLQ6ZTU2 488 aa13.1□□□□□ -0.31
SRGAP3-204ENST00000470951 IFNKQ9P0W0 207 aa13.1□□□□□ -0.31
SRGAP3-204ENST00000470951 COL15A1P39059 1388 aa13.09□□□□□ -0.31
SRGAP3-204ENST00000470951 MYO1BO43795 1136 aa13.09□□□□□ -0.31
SRGAP3-204ENST00000470951 DHX16O60231 1041 aaKnown RBP13.09□□□□□ -0.31
SRGAP3-204ENST00000470951 ANXA1P04083 346 aa13.09□□□□□ -0.31
SRGAP3-204ENST00000470951 PSME1Q06323 249 aa13.09□□□□□ -0.31
SRGAP3-204ENST00000470951 CWF19L2Q2TBE0 894 aaKnown RBP13.09□□□□□ -0.31
SRGAP3-204ENST00000470951 MUM1L1Q5H9M0 696 aa13.09□□□□□ -0.31
SRGAP3-204ENST00000470951 CCDC158Q5M9N0 1113 aa13.09□□□□□ -0.31
SRGAP3-204ENST00000470951 HOMER1Q86YM7 354 aa13.09□□□□□ -0.31
SRGAP3-204ENST00000470951 KCNG4Q8TDN1 519 aa13.09□□□□□ -0.31
SRGAP3-204ENST00000470951 LGR6Q9HBX8 967 aa13.09□□□□□ -0.31
SRGAP3-204ENST00000470951 ST7Q9NRC1 585 aa13.09□□□□□ -0.31
SRGAP3-204ENST00000470951 DNAI1Q9UI46 699 aa13.09□□□□□ -0.31
SRGAP3-204ENST00000470951 PCDHA7Q9UN72 937 aa13.09□□□□□ -0.31
SRGAP3-204ENST00000470951 CTDNEP1O95476 244 aa13.08□□□□□ -0.31
SRGAP3-204ENST00000470951 YEATS4O95619 227 aa13.08□□□□□ -0.31
SRGAP3-204ENST00000470951 GUCY2CP25092 1073 aa13.08□□□□□ -0.31
SRGAP3-204ENST00000470951 NLRP12P59046 1061 aa13.08□□□□□ -0.31
SRGAP3-204ENST00000470951 LRRFIP1Q32MZ4 808 aaKnown RBP13.08□□□□□ -0.31
SRGAP3-204ENST00000470951 MNS1Q8NEH6 495 aa13.08□□□□□ -0.31
SRGAP3-204ENST00000470951 ZNF274Q96GC6 653 aaPredicted RBP13.08□□□□□ -0.31
SRGAP3-204ENST00000470951 UBXN6Q9BZV1 441 aa13.08□□□□□ -0.31
SRGAP3-204ENST00000470951 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.08□□□□□ -0.31
SRGAP3-204ENST00000470951 SH3TC1Q8TE82 1336 aa13.08□□□□□ -0.32
SRGAP3-204ENST00000470951 ZNF609O15014 1411 aa13.08□□□□□ -0.32
SRGAP3-204ENST00000470951 IRF6O14896 467 aa13.08□□□□□ -0.32
SRGAP3-204ENST00000470951 CBFA2T2O43439 604 aa13.08□□□□□ -0.32
SRGAP3-204ENST00000470951 TADA3O75528 432 aa13.08□□□□□ -0.32
SRGAP3-204ENST00000470951 GPS2Q13227 327 aa13.08□□□□□ -0.32
SRGAP3-204ENST00000470951 SH3BP1Q9Y3L3 701 aa13.08□□□□□ -0.32
SRGAP3-204ENST00000470951 NPHP1O15259 732 aa13.07□□□□□ -0.32
SRGAP3-204ENST00000470951 KCNQ3O43525 872 aa13.07□□□□□ -0.32
SRGAP3-204ENST00000470951 TNNT3P45378 269 aaPredicted RBP13.07□□□□□ -0.32
SRGAP3-204ENST00000470951 HNRNPH2P55795 449 aaKnown RBP13.07□□□□□ -0.32
SRGAP3-204ENST00000470951 EXOSC10Q01780 885 aaKnown RBP13.07□□□□□ -0.32
SRGAP3-204ENST00000470951 DPCR1Q3MIW9 517 aa13.07□□□□□ -0.32
SRGAP3-204ENST00000470951 FBXL16Q8N461 479 aa13.07□□□□□ -0.32
SRGAP3-204ENST00000470951 FTOQ9C0B1 505 aaKnown RBP eCLIP13.07□□□□□ -0.32
SRGAP3-204ENST00000470951 COPRSQ9NQ92 184 aa13.07□□□□□ -0.32
SRGAP3-204ENST00000470951 POLR3EQ9NVU0 708 aa13.07□□□□□ -0.32
SRGAP3-204ENST00000470951 PHRF1Q9P1Y6 1649 aaKnown RBP13.07□□□□□ -0.32
SRGAP3-204ENST00000470951 GOLGA6L9A6NEM1 432 aa13.07□□□□□ -0.32
SRGAP3-204ENST00000470951 ZSCAN12O43309 604 aa13.07□□□□□ -0.32
SRGAP3-204ENST00000470951 LINC00301Q8NCQ3 95 aa13.07□□□□□ -0.32
SRGAP3-204ENST00000470951 IP6K1Q92551 441 aa13.07□□□□□ -0.32
SRGAP3-204ENST00000470951 LTV1Q96GA3 475 aaPredicted RBP13.07□□□□□ -0.32
SRGAP3-204ENST00000470951 MPHOSPH8Q99549 860 aa13.07□□□□□ -0.32
SRGAP3-204ENST00000470951 DSCC1Q9BVC3 393 aa13.07□□□□□ -0.32
SRGAP3-204ENST00000470951 DONSONQ9NYP3 566 aa13.07□□□□□ -0.32
SRGAP3-204ENST00000470951 SIPA1L3O60292 1781 aaPredicted RBP13.07□□□□□ -0.32
SRGAP3-204ENST00000470951 SLC3A2P08195 630 aaKnown RBP13.06□□□□□ -0.32
SRGAP3-204ENST00000470951 AMOTQ4VCS5 1084 aa13.06□□□□□ -0.32
SRGAP3-204ENST00000470951 PLEKHO1Q53GL0 409 aaPredicted RBP13.06□□□□□ -0.32
SRGAP3-204ENST00000470951 ILDR1Q86SU0 546 aaPredicted RBP13.06□□□□□ -0.32
SRGAP3-204ENST00000470951 TMX1Q9H3N1 280 aa13.06□□□□□ -0.32
SRGAP3-204ENST00000470951 C19orf44Q9H6X5 657 aa13.06□□□□□ -0.32
SRGAP3-204ENST00000470951 DDX21Q9NR30 783 aaKnown RBP eCLIP13.06□□□□□ -0.32
SRGAP3-204ENST00000470951 RSPH14Q9UHP6 348 aa13.06□□□□□ -0.32
SRGAP3-204ENST00000470951 CARMIL3Q8ND23 1372 aa13.06□□□□□ -0.32
SRGAP3-204ENST00000470951 MAP2K1Q02750 393 aaPredicted RBP13.06□□□□□ -0.32
SRGAP3-204ENST00000470951 NCAPHQ15003 741 aa13.06□□□□□ -0.32
SRGAP3-204ENST00000470951 TRIM65Q6PJ69 517 aa13.06□□□□□ -0.32
SRGAP3-204ENST00000470951 BRAPQ7Z569 592 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms