RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 SOX17Q9H6I2 414 aaPredicted RBP8.31□□□□□ -1.08
RBM39-227ENST00000470563 MBIPQ9NS73 344 aa8.31□□□□□ -1.08
RBM39-227ENST00000470563 TMEM39AQ9NV64 488 aa8.31□□□□□ -1.08
RBM39-227ENST00000470563 SAMM50Q9Y512 469 aa8.31□□□□□ -1.08
RBM39-227ENST00000470563 SUPT16HQ9Y5B9 1047 aaKnown RBP8.31□□□□□ -1.08
RBM39-227ENST00000470563 PTPRAP18433 802 aa8.3□□□□□ -1.08
RBM39-227ENST00000470563 MX2P20592 715 aa8.3□□□□□ -1.08
RBM39-227ENST00000470563 PPP2R3AQ06190 1150 aa8.3□□□□□ -1.08
RBM39-227ENST00000470563 FAAP100Q0VG06 881 aa8.3□□□□□ -1.08
RBM39-227ENST00000470563 SPRED3Q2MJR0 410 aa8.3□□□□□ -1.08
RBM39-227ENST00000470563 TRIM42Q8IWZ5 723 aa8.3□□□□□ -1.08
RBM39-227ENST00000470563 HHIPQ96QV1 700 aa8.3□□□□□ -1.08
RBM39-227ENST00000470563 KLF15Q9UIH9 416 aa8.3□□□□□ -1.08
RBM39-227ENST00000470563 CYP8B1Q9UNU6 501 aa8.3□□□□□ -1.08
RBM39-227ENST00000470563 C11orf95C9JLR9 678 aaPredicted RBP8.29□□□□□ -1.08
RBM39-227ENST00000470563 CELA3AP09093 270 aa8.29□□□□□ -1.08
RBM39-227ENST00000470563 DNAJA1P31689 397 aaKnown RBP8.29□□□□□ -1.08
RBM39-227ENST00000470563 GBP2P32456 591 aaPredicted RBP8.29□□□□□ -1.08
RBM39-227ENST00000470563 ADH7P40394 386 aa8.29□□□□□ -1.08
RBM39-227ENST00000470563 ATP11AP98196 1134 aa8.29□□□□□ -1.08
RBM39-227ENST00000470563 TPTE2Q6XPS3 522 aa8.29□□□□□ -1.08
RBM39-227ENST00000470563 SLITRK4Q8IW52 837 aa8.29□□□□□ -1.08
RBM39-227ENST00000470563 ZNF296Q8WUU4 475 aaPredicted RBP8.29□□□□□ -1.08
RBM39-227ENST00000470563 WNT8BQ93098 351 aa8.29□□□□□ -1.08
RBM39-227ENST00000470563 PLD4Q96BZ4 506 aa8.29□□□□□ -1.08
RBM39-227ENST00000470563 LPIN3Q9BQK8 851 aa8.29□□□□□ -1.08
RBM39-227ENST00000470563 GDF2Q9UK05 429 aaPredicted RBP8.29□□□□□ -1.08
RBM39-227ENST00000470563 ELOA3CA0A087WX78 387 aaPredicted RBP8.28□□□□□ -1.08
RBM39-227ENST00000470563 ELOA3DA6NLF2 546 aaPredicted RBP8.28□□□□□ -1.08
RBM39-227ENST00000470563 METTL12A8MUP2 240 aa8.28□□□□□ -1.08
RBM39-227ENST00000470563 J3QW42 95 aa8.28□□□□□ -1.08
RBM39-227ENST00000470563 EIF2AK2P19525 551 aaKnown RBP8.28□□□□□ -1.08
RBM39-227ENST00000470563 NME2P22392 152 aa8.28□□□□□ -1.08
RBM39-227ENST00000470563 CAMK2GQ13555 558 aaPredicted RBP8.28□□□□□ -1.08
RBM39-227ENST00000470563 ELOA3BQ3SY89 546 aa8.28□□□□□ -1.08
RBM39-227ENST00000470563 TTBK2Q6IQ55 1244 aa8.28□□□□□ -1.08
RBM39-227ENST00000470563 FBXL19Q6PCT2 694 aa8.28□□□□□ -1.08
RBM39-227ENST00000470563 SLCO4C1Q6ZQN7 724 aa8.28□□□□□ -1.08
RBM39-227ENST00000470563 VN1R5Q7Z5H4 357 aa8.28□□□□□ -1.08
RBM39-227ENST00000470563 NOP9Q86U38 636 aaKnown RBP8.28□□□□□ -1.08
RBM39-227ENST00000470563 ELOA3Q8NG57 546 aa8.28□□□□□ -1.08
RBM39-227ENST00000470563 EAF1Q96JC9 268 aaPredicted RBP8.28□□□□□ -1.08
RBM39-227ENST00000470563 TRIM56Q9BRZ2 755 aaKnown RBP8.28□□□□□ -1.08
RBM39-227ENST00000470563 MUC3BQ9H195 1237 aa8.28□□□□□ -1.08
RBM39-227ENST00000470563 LRRC4BQ9NT99 713 aa8.28□□□□□ -1.08
RBM39-227ENST00000470563 CACNA2D2Q9NY47 1150 aa8.28□□□□□ -1.08
RBM39-227ENST00000470563 NXF1Q9UBU9 619 aaKnown RBP8.28□□□□□ -1.08
RBM39-227ENST00000470563 NAGPAQ9UK23 515 aa8.28□□□□□ -1.08
RBM39-227ENST00000470563 CDC14CA4D256 554 aa8.27□□□□□ -1.09
RBM39-227ENST00000470563 H3BM21 787 aa8.27□□□□□ -1.09
RBM39-227ENST00000470563 GPR25O00155 361 aa8.27□□□□□ -1.09
RBM39-227ENST00000470563 TFE3P19532 575 aaPredicted RBP8.27□□□□□ -1.09
RBM39-227ENST00000470563 PCDH1Q08174 1060 aa8.27□□□□□ -1.09
RBM39-227ENST00000470563 LRRC14Q15048 493 aa8.27□□□□□ -1.09
RBM39-227ENST00000470563 PERM1Q5SV97 790 aa8.27□□□□□ -1.09
RBM39-227ENST00000470563 KANK3Q6NY19 840 aa8.27□□□□□ -1.09
RBM39-227ENST00000470563 FAM196AQ6ZSG2 479 aa8.27□□□□□ -1.09
RBM39-227ENST00000470563 FAM35AQ86V20 835 aa8.27□□□□□ -1.09
RBM39-227ENST00000470563 FCHSD1Q86WN1 690 aa8.27□□□□□ -1.09
RBM39-227ENST00000470563 GOLGA6L1Q8N7Z2 621 aa8.27□□□□□ -1.09
RBM39-227ENST00000470563 TRPA1O75762 1119 aa8.26□□□□□ -1.09
RBM39-227ENST00000470563 PCNX4Q63HM2 1172 aa8.26□□□□□ -1.09
RBM39-227ENST00000470563 CEP135Q66GS9 1140 aa8.26□□□□□ -1.09
RBM39-227ENST00000470563 DPH6Q7L8W6 267 aa8.26□□□□□ -1.09
RBM39-227ENST00000470563 DDX54Q8TDD1 881 aaKnown RBP8.26□□□□□ -1.09
RBM39-227ENST00000470563 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.26□□□□□ -1.094e-23■■□□□ 13.8
RBM39-227ENST00000470563 EMILIN2Q9BXX0 1053 aa8.26□□□□□ -1.09
RBM39-227ENST00000470563 PRDM6Q9NQX0 595 aa8.26□□□□□ -1.09
RBM39-227ENST00000470563 PF4P02776 101 aa8.25□□□□□ -1.09
RBM39-227ENST00000470563 ESRRAP11474 423 aaPredicted RBP8.25□□□□□ -1.09
RBM39-227ENST00000470563 BMP6P22004 513 aa8.25□□□□□ -1.09
RBM39-227ENST00000470563 MLLT1Q03111 559 aaPredicted RBP8.25□□□□□ -1.09
RBM39-227ENST00000470563 AP3B2Q13367 1082 aa8.25□□□□□ -1.09
RBM39-227ENST00000470563 ASAP3Q8TDY4 903 aa8.25□□□□□ -1.09
RBM39-227ENST00000470563 CADPSQ9ULU8 1353 aa8.24□□□□□ -1.09
RBM39-227ENST00000470563 FAM221AA4D161 298 aa8.24□□□□□ -1.09
RBM39-227ENST00000470563 FBXO24O75426 580 aa8.24□□□□□ -1.09
RBM39-227ENST00000470563 PCBP4P57723 403 aaKnown RBP8.24□□□□□ -1.09
RBM39-227ENST00000470563 ZNF252P-AS1Q0IIN9 211 aa8.24□□□□□ -1.09
RBM39-227ENST00000470563 MPP2Q14168 576 aa8.24□□□□□ -1.09
RBM39-227ENST00000470563 ZNF423Q2M1K9 1284 aa8.24□□□□□ -1.09
RBM39-227ENST00000470563 ELMSAN1Q6PJG2 1045 aa8.24□□□□□ -1.09
RBM39-227ENST00000470563 C20orf204Q6ZNR8 217 aa8.24□□□□□ -1.09
RBM39-227ENST00000470563 ILDR2Q71H61 639 aa8.24□□□□□ -1.09
RBM39-227ENST00000470563 REXO1Q8N1G1 1221 aaKnown RBP8.24□□□□□ -1.09
RBM39-227ENST00000470563 GATAD2BQ8WXI9 593 aa8.24□□□□□ -1.09
RBM39-227ENST00000470563 MKL1Q969V6 931 aa8.24□□□□□ -1.09
RBM39-227ENST00000470563 LNPKQ9C0E8 428 aa8.24□□□□□ -1.09
RBM39-227ENST00000470563 GPN3Q9UHW5 284 aaPredicted RBP8.24□□□□□ -1.09
RBM39-227ENST00000470563 H3BRJ5 948 aa8.23□□□□□ -1.09
RBM39-227ENST00000470563 PAGE1O75459 146 aa8.23□□□□□ -1.09
RBM39-227ENST00000470563 STK10O94804 968 aaKnown RBP8.23□□□□□ -1.09
RBM39-227ENST00000470563 GTF2F1P35269 517 aaKnown RBP eCLIP8.23□□□□□ -1.09
RBM39-227ENST00000470563 SRSF11Q05519 484 aaKnown RBP8.23□□□□□ -1.09
RBM39-227ENST00000470563 GRIK5Q16478 980 aa8.23□□□□□ -1.09
RBM39-227ENST00000470563 SNAP47Q5SQN1 464 aa8.23□□□□□ -1.09
RBM39-227ENST00000470563 DIEXFQ68CQ4 756 aaKnown RBP8.23□□□□□ -1.09
RBM39-227ENST00000470563 HFE2Q6ZVN8 426 aa8.23□□□□□ -1.09
RBM39-227ENST00000470563 PDZD3Q86UT5 571 aa8.23□□□□□ -1.09
RBM39-227ENST00000470563 MICALL1Q8N3F8 863 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms