RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 PLA2G12BQ9BX93 195 aa17.05■□□□□ 0.32
LINC00173-201ENST00000470091 RNF186Q9NXI6 227 aa17.05■□□□□ 0.32
LINC00173-201ENST00000470091 ANKRD18BA2A2Z9 1011 aa17.04■□□□□ 0.32
LINC00173-201ENST00000470091 GTF2IP78347 998 aa17.04■□□□□ 0.32
LINC00173-201ENST00000470091 CHRNDQ07001 517 aa17.04■□□□□ 0.32
LINC00173-201ENST00000470091 TTLL12Q14166 644 aaPredicted RBP17.04■□□□□ 0.32
LINC00173-201ENST00000470091 STRIP1Q5VSL9 837 aa17.04■□□□□ 0.32
LINC00173-201ENST00000470091 CCDC136Q96JN2 1154 aa17.04■□□□□ 0.32
LINC00173-201ENST00000470091 TAF5LO75529 589 aa17.03■□□□□ 0.32
LINC00173-201ENST00000470091 SASH1O94885 1247 aa17.03■□□□□ 0.32
LINC00173-201ENST00000470091 SLC10A3P09131 477 aa17.03■□□□□ 0.32
LINC00173-201ENST00000470091 KIAA0825Q8IV33 1275 aa17.03■□□□□ 0.32
LINC00173-201ENST00000470091 PITPNM2Q9BZ72 1349 aa17.02■□□□□ 0.32
LINC00173-201ENST00000470091 WNT10BO00744 389 aa17.02■□□□□ 0.32
LINC00173-201ENST00000470091 IFIT5Q13325 482 aaKnown RBP17.02■□□□□ 0.32
LINC00173-201ENST00000470091 SPEF2Q9C093 1822 aa17.02■□□□□ 0.31
LINC00173-201ENST00000470091 FOXO4P98177 505 aa17.01■□□□□ 0.31
LINC00173-201ENST00000470091 PRKG1Q13976 671 aa17.01■□□□□ 0.31
LINC00173-201ENST00000470091 BEND3Q5T5X7 828 aa17.01■□□□□ 0.31
LINC00173-201ENST00000470091 RASAL3Q86YV0 1011 aa17.01■□□□□ 0.31
LINC00173-201ENST00000470091 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.01■□□□□ 0.31
LINC00173-201ENST00000470091 ZNF609O15014 1411 aa17.01■□□□□ 0.31
LINC00173-201ENST00000470091 MYO3BQ8WXR4 1341 aa17■□□□□ 0.31
LINC00173-201ENST00000470091 MYH3P11055 1940 aa17■□□□□ 0.31
LINC00173-201ENST00000470091 FKBP1BP68106 108 aa17■□□□□ 0.31
LINC00173-201ENST00000470091 MKRN3Q13064 507 aaKnown RBP17■□□□□ 0.31
LINC00173-201ENST00000470091 EPHA10Q5JZY3 1008 aa17■□□□□ 0.31
LINC00173-201ENST00000470091 LMBR1LQ6UX01 489 aa17■□□□□ 0.31
LINC00173-201ENST00000470091 ZNF594Q96JF6 807 aaPredicted RBP17■□□□□ 0.31
LINC00173-201ENST00000470091 CD209Q9NNX6 404 aa17■□□□□ 0.31
LINC00173-201ENST00000470091 HDAC9Q9UKV0 1011 aa17■□□□□ 0.31
LINC00173-201ENST00000470091 DDX19BQ9UMR2 479 aa17■□□□□ 0.31
LINC00173-201ENST00000470091 CACNA1FO60840 1977 aa16.99■□□□□ 0.31
LINC00173-201ENST00000470091 TAF7LQ5H9L4 462 aa16.99■□□□□ 0.31
LINC00173-201ENST00000470091 SLC4A10Q6U841 1118 aa16.99■□□□□ 0.31
LINC00173-201ENST00000470091 SAGE1Q9NXZ1 904 aa16.99■□□□□ 0.31
LINC00173-201ENST00000470091 JAG2Q9Y219 1238 aa16.99■□□□□ 0.31
LINC00173-201ENST00000470091 F8W031 263 aaPredicted RBP16.98■□□□□ 0.31
LINC00173-201ENST00000470091 NF2P35240 595 aa16.98■□□□□ 0.31
LINC00173-201ENST00000470091 MLLT1Q03111 559 aaPredicted RBP16.98■□□□□ 0.31
LINC00173-201ENST00000470091 C9orf78Q9NZ63 289 aaPredicted RBP16.98■□□□□ 0.31
LINC00173-201ENST00000470091 DLGAP5Q15398 846 aa16.97■□□□□ 0.31
LINC00173-201ENST00000470091 CCDC57Q2TAC2 916 aa16.97■□□□□ 0.31
LINC00173-201ENST00000470091 LDHAL6AQ6ZMR3 332 aa16.97■□□□□ 0.31
LINC00173-201ENST00000470091 CNNM1Q9NRU3 951 aa16.97■□□□□ 0.31
LINC00173-201ENST00000470091 PSME4Q14997 1843 aa16.97■□□□□ 0.31
LINC00173-201ENST00000470091 GRM8O00222 908 aa16.96■□□□□ 0.31
LINC00173-201ENST00000470091 AAMPQ13685 434 aa16.96■□□□□ 0.31
LINC00173-201ENST00000470091 INTS3Q68E01 1043 aaKnown RBP16.96■□□□□ 0.31
LINC00173-201ENST00000470091 REM2Q8IYK8 340 aaPredicted RBP16.96■□□□□ 0.31
LINC00173-201ENST00000470091 CERS5Q8N5B7 392 aa16.96■□□□□ 0.31
LINC00173-201ENST00000470091 FZD1Q9UP38 647 aa16.96■□□□□ 0.31
LINC00173-201ENST00000470091 PCDHAC2Q9Y5I4 1007 aa16.96■□□□□ 0.31
LINC00173-201ENST00000470091 TBC1D8O95759 1140 aa16.95■□□□□ 0.3
LINC00173-201ENST00000470091 MMP14P50281 582 aa16.95■□□□□ 0.3
LINC00173-201ENST00000470091 PTPN12Q05209 780 aaKnown RBP16.95■□□□□ 0.3
LINC00173-201ENST00000470091 ZNF804AQ7Z570 1209 aa16.95■□□□□ 0.3
LINC00173-201ENST00000470091 APOBEC3FQ8IUX4 373 aaKnown RBP16.95■□□□□ 0.3
LINC00173-201ENST00000470091 RGS19P49795 217 aa16.94■□□□□ 0.3
LINC00173-201ENST00000470091 ARMC9Q7Z3E5 817 aa16.94■□□□□ 0.3
LINC00173-201ENST00000470091 ZBED3Q96IU2 234 aaPredicted RBP16.94■□□□□ 0.3
LINC00173-201ENST00000470091 DEFB129Q9H1M3 183 aa16.94■□□□□ 0.3
LINC00173-201ENST00000470091 ZBTB40Q9NUA8 1239 aa16.94■□□□□ 0.3
LINC00173-201ENST00000470091 ANGEL1Q9UNK9 670 aaKnown RBP16.94■□□□□ 0.3
LINC00173-201ENST00000470091 IRS2Q9Y4H2 1338 aa16.94■□□□□ 0.3
LINC00173-201ENST00000470091 CLRN2A0PK11 232 aa16.93■□□□□ 0.3
LINC00173-201ENST00000470091 RBM5P52756 815 aaKnown RBP eCLIP16.93■□□□□ 0.3
LINC00173-201ENST00000470091 C15orf52Q6ZUT6 534 aaKnown RBP16.93■□□□□ 0.3
LINC00173-201ENST00000470091 SRCIN1Q9C0H9 1055 aa16.93■□□□□ 0.3
LINC00173-201ENST00000470091 PCDHB15Q9Y5E8 787 aa16.93■□□□□ 0.3
LINC00173-201ENST00000470091 AKAP11Q9UKA4 1901 aa16.93■□□□□ 0.3
LINC00173-201ENST00000470091 PAPPA2Q9BXP8 1791 aa16.92■□□□□ 0.3
LINC00173-201ENST00000470091 ZBTB7BO15156 539 aaPredicted RBP16.92■□□□□ 0.3
LINC00173-201ENST00000470091 ALDH1L1O75891 902 aa16.92■□□□□ 0.3
LINC00173-201ENST00000470091 IL1R1P14778 569 aa16.92■□□□□ 0.3
LINC00173-201ENST00000470091 CFAP100Q494V2 611 aa16.92■□□□□ 0.3
LINC00173-201ENST00000470091 SUCLG2Q96I99 432 aa16.92■□□□□ 0.3
LINC00173-201ENST00000470091 PRMT6Q96LA8 375 aaPredicted RBP16.92■□□□□ 0.3
LINC00173-201ENST00000470091 PUS3Q9BZE2 481 aaKnown RBP16.92■□□□□ 0.3
LINC00173-201ENST00000470091 VEZTQ9HBM0 779 aa16.92■□□□□ 0.3
LINC00173-201ENST00000470091 TM4SF4P48230 202 aa16.91■□□□□ 0.3
LINC00173-201ENST00000470091 CTU1Q7Z7A3 348 aaKnown RBP16.91■□□□□ 0.3
LINC00173-201ENST00000470091 SLC10A4Q96EP9 437 aa16.91■□□□□ 0.3
LINC00173-201ENST00000470091 C1orf115Q9H7X2 142 aa16.91■□□□□ 0.3
LINC00173-201ENST00000470091 NBPF7P0C2Y1 421 aaPredicted RBP16.9■□□□□ 0.3
LINC00173-201ENST00000470091 GYG1P46976 350 aa16.9■□□□□ 0.3
LINC00173-201ENST00000470091 SOX10P56693 466 aa16.9■□□□□ 0.3
LINC00173-201ENST00000470091 LDLRAD1Q5T700 205 aa16.9■□□□□ 0.3
LINC00173-201ENST00000470091 ZNF296Q8WUU4 475 aaPredicted RBP16.9■□□□□ 0.3
LINC00173-201ENST00000470091 MEIS3Q99687 375 aa16.9■□□□□ 0.3
LINC00173-201ENST00000470091 CHMP4BQ9H444 224 aaKnown RBP16.9■□□□□ 0.3
LINC00173-201ENST00000470091 AOX1Q06278 1338 aa16.9■□□□□ 0.3
LINC00173-201ENST00000470091 TNRC18O15417 2968 aaPredicted RBP16.89■□□□□ 0.3
LINC00173-201ENST00000470091 SPDYE2BA6NHP3 402 aa16.89■□□□□ 0.29
LINC00173-201ENST00000470091 MYO1BO43795 1136 aa16.89■□□□□ 0.29
LINC00173-201ENST00000470091 SPDYE6P0CI01 402 aa16.89■□□□□ 0.29
LINC00173-201ENST00000470091 HIBADHP31937 336 aaKnown RBP16.89■□□□□ 0.29
LINC00173-201ENST00000470091 MTMR14Q8NCE2 650 aa16.89■□□□□ 0.29
LINC00173-201ENST00000470091 KAZALD1Q96I82 304 aa16.89■□□□□ 0.29
LINC00173-201ENST00000470091 IGHDP01880 384 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms