RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-210	ENST00000470086	FRMPD3	Q5JV73	1810 aa		10.88	□□□□□ -0.67
LSM2-210	ENST00000470086	COL1A1	P02452	1464 aa	Predicted RBP	10.87	□□□□□ -0.67
LSM2-210	ENST00000470086	RIOK3	O14730	519 aa	Known RBP	10.87	□□□□□ -0.67
LSM2-210	ENST00000470086	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.87	□□□□□ -0.67
LSM2-210	ENST00000470086	EIF2S2	P20042	333 aa	Known RBP	10.87	□□□□□ -0.67
LSM2-210	ENST00000470086	CTGF	P29279	349 aa		10.87	□□□□□ -0.67
LSM2-210	ENST00000470086	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
LSM2-210	ENST00000470086	SF3B3	Q15393	1217 aa	Known RBP	10.87	□□□□□ -0.67
LSM2-210	ENST00000470086	DACT2	Q5SW24	774 aa		10.87	□□□□□ -0.67
LSM2-210	ENST00000470086	LHX8	Q68G74	356 aa		10.87	□□□□□ -0.67
LSM2-210	ENST00000470086		Q7L0L9	218 aa		10.87	□□□□□ -0.67
LSM2-210	ENST00000470086	TMC4	Q7Z404	712 aa		10.87	□□□□□ -0.67
LSM2-210	ENST00000470086	CDAN1	Q8IWY9	1227 aa		10.87	□□□□□ -0.67
LSM2-210	ENST00000470086	ERO1A	Q96HE7	468 aa		10.87	□□□□□ -0.67
LSM2-210	ENST00000470086	ZBED3	Q96IU2	234 aa	Predicted RBP	10.87	□□□□□ -0.67
LSM2-210	ENST00000470086	ATP5J2-PTCD1	G3V325	749 aa		10.86	□□□□□ -0.67
LSM2-210	ENST00000470086	ECM2	O94769	699 aa	Predicted RBP	10.86	□□□□□ -0.67
LSM2-210	ENST00000470086	KLRK1	P26718	216 aa		10.86	□□□□□ -0.67
LSM2-210	ENST00000470086	TCIRG1	Q13488	830 aa		10.86	□□□□□ -0.67
LSM2-210	ENST00000470086	SLC9C1	Q4G0N8	1177 aa		10.86	□□□□□ -0.67
LSM2-210	ENST00000470086	EYA3	Q99504	573 aa		10.86	□□□□□ -0.67
LSM2-210	ENST00000470086	HTATSF1	O43719	755 aa	Known RBP	10.85	□□□□□ -0.67
LSM2-210	ENST00000470086	SP3	Q02447	781 aa		10.85	□□□□□ -0.67
LSM2-210	ENST00000470086	TXNRD3	Q86VQ6	643 aa		10.85	□□□□□ -0.67
LSM2-210	ENST00000470086	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.85	□□□□□ -0.67
LSM2-210	ENST00000470086	ISCA1	Q9BUE6	129 aa		10.85	□□□□□ -0.67
LSM2-210	ENST00000470086	DOCK3	Q8IZD9	2030 aa		10.85	□□□□□ -0.67
LSM2-210	ENST00000470086	USP17L3	A6NCW0	530 aa		10.84	□□□□□ -0.67
LSM2-210	ENST00000470086	USP17L4	A6NCW7	530 aa		10.84	□□□□□ -0.67
LSM2-210	ENST00000470086	MANSC4	A6NHS7	340 aa	Predicted RBP	10.84	□□□□□ -0.67
LSM2-210	ENST00000470086	MAP3K11	Q16584	847 aa		10.84	□□□□□ -0.67
LSM2-210	ENST00000470086	SLC4A8	Q2Y0W8	1093 aa		10.84	□□□□□ -0.67
LSM2-210	ENST00000470086	USP17L1	Q7RTZ2	530 aa		10.84	□□□□□ -0.67
LSM2-210	ENST00000470086	JARID2	Q92833	1246 aa	Predicted RBP	10.84	□□□□□ -0.67
LSM2-210	ENST00000470086	PLEKHF1	Q96S99	279 aa		10.84	□□□□□ -0.67
LSM2-210	ENST00000470086	ZC3H12C	Q9C0D7	883 aa	Known RBP	10.84	□□□□□ -0.67
LSM2-210	ENST00000470086	GGA1	Q9UJY5	639 aa		10.84	□□□□□ -0.67
LSM2-210	ENST00000470086	MED23	Q9ULK4	1368 aa		10.84	□□□□□ -0.67
LSM2-210	ENST00000470086	MAST2	Q6P0Q8	1798 aa		10.83	□□□□□ -0.68
LSM2-210	ENST00000470086	DNAH12	Q6ZR08	3092 aa		10.83	□□□□□ -0.68
LSM2-210	ENST00000470086	ALDH1A1	P00352	501 aa		10.83	□□□□□ -0.68
LSM2-210	ENST00000470086	ZBTB48	P10074	688 aa	Predicted RBP	10.83	□□□□□ -0.68
LSM2-210	ENST00000470086	ARMC9	Q7Z3E5	817 aa		10.83	□□□□□ -0.68
LSM2-210	ENST00000470086	BRI3BP	Q8WY22	251 aa		10.83	□□□□□ -0.68
LSM2-210	ENST00000470086	MS4A4A	Q96JQ5	239 aa		10.83	□□□□□ -0.68
LSM2-210	ENST00000470086	PLXNB2	O15031	1838 aa		10.83	□□□□□ -0.68
LSM2-210	ENST00000470086	PHIP	Q8WWQ0	1821 aa		10.83	□□□□□ -0.68
LSM2-210	ENST00000470086	LTBP2	Q14767	1821 aa		10.82	□□□□□ -0.68
LSM2-210	ENST00000470086	TESPA1	A2RU30	521 aa	Predicted RBP	10.82	□□□□□ -0.68
LSM2-210	ENST00000470086	IRS4	O14654	1257 aa	Predicted RBP	10.82	□□□□□ -0.68
LSM2-210	ENST00000470086	RPS8	P62241	208 aa	Known RBP	10.82	□□□□□ -0.68
LSM2-210	ENST00000470086	FAM43A	Q8N2R8	423 aa		10.82	□□□□□ -0.68
LSM2-210	ENST00000470086	CERS5	Q8N5B7	392 aa		10.82	□□□□□ -0.68
LSM2-210	ENST00000470086	CHPF2	Q9P2E5	772 aa		10.82	□□□□□ -0.68
LSM2-210	ENST00000470086	ANKIB1	Q9P2G1	1089 aa		10.82	□□□□□ -0.68
LSM2-210	ENST00000470086	POTEB2	H3BUK9	544 aa		10.81	□□□□□ -0.68
LSM2-210	ENST00000470086	ZBTB7B	O15156	539 aa	Predicted RBP	10.81	□□□□□ -0.68
LSM2-210	ENST00000470086	PPP2R1A	P30153	589 aa		10.81	□□□□□ -0.68
LSM2-210	ENST00000470086	NBPF12	Q5TAG4	269 aa	Predicted RBP	10.81	□□□□□ -0.68
LSM2-210	ENST00000470086	KIAA0825	Q8IV33	1275 aa		10.81	□□□□□ -0.68
LSM2-210	ENST00000470086	FBXW7	Q969H0	707 aa		10.81	□□□□□ -0.68
LSM2-210	ENST00000470086	TSPYL4	Q9UJ04	414 aa		10.81	□□□□□ -0.68
LSM2-210	ENST00000470086	MYH13	Q9UKX3	1938 aa		10.81	□□□□□ -0.68
LSM2-210	ENST00000470086	CLRN2	A0PK11	232 aa		10.8	□□□□□ -0.68
LSM2-210	ENST00000470086	NF2	P35240	595 aa		10.8	□□□□□ -0.68
LSM2-210	ENST00000470086	HSP90AB3P	Q58FF7	597 aa		10.8	□□□□□ -0.68
LSM2-210	ENST00000470086	APOBEC3F	Q8IUX4	373 aa	Known RBP	10.8	□□□□□ -0.68
LSM2-210	ENST00000470086	PNISR	Q8TF01	805 aa	Known RBP	10.8	□□□□□ -0.68
LSM2-210	ENST00000470086	DPF3	Q92784	378 aa		10.8	□□□□□ -0.68
LSM2-210	ENST00000470086	ELP3	Q9H9T3	547 aa		10.8	□□□□□ -0.68
LSM2-210	ENST00000470086	XDH	P47989	1333 aa		10.8	□□□□□ -0.68
LSM2-210	ENST00000470086	DOCK2	Q92608	1830 aa		10.79	□□□□□ -0.68
LSM2-210	ENST00000470086	USP2	O75604	605 aa	Predicted RBP	10.79	□□□□□ -0.68
LSM2-210	ENST00000470086	IRX5	P78411	483 aa	Predicted RBP	10.79	□□□□□ -0.68
LSM2-210	ENST00000470086	NFE2L2	Q16236	605 aa		10.79	□□□□□ -0.68
LSM2-210	ENST00000470086	OPTN	Q96CV9	577 aa		10.79	□□□□□ -0.68
LSM2-210	ENST00000470086	SLC10A4	Q96EP9	437 aa		10.79	□□□□□ -0.68
LSM2-210	ENST00000470086	DEFB129	Q9H1M3	183 aa		10.79	□□□□□ -0.68
LSM2-210	ENST00000470086	STAP2	Q9UGK3	403 aa		10.79	□□□□□ -0.68
LSM2-210	ENST00000470086	RAPGEFL1	Q9UHV5	662 aa		10.79	□□□□□ -0.68
LSM2-210	ENST00000470086	COL2A1	P02458	1487 aa	Predicted RBP	10.79	□□□□□ -0.68
LSM2-210	ENST00000470086	IRS2	Q9Y4H2	1338 aa		10.79	□□□□□ -0.68
LSM2-210	ENST00000470086		G3V3G9	751 aa		10.78	□□□□□ -0.68
LSM2-210	ENST00000470086	SNAP23	O00161	211 aa		10.78	□□□□□ -0.68
LSM2-210	ENST00000470086	TAF1C	Q15572	869 aa	Predicted RBP	10.78	□□□□□ -0.68
LSM2-210	ENST00000470086	PODN	Q7Z5L7	613 aa		10.78	□□□□□ -0.68
LSM2-210	ENST00000470086	REV3L	O60673	3130 aa		10.78	□□□□□ -0.68
LSM2-210	ENST00000470086	ZNF804B	A4D1E1	1349 aa		10.78	□□□□□ -0.68
LSM2-210	ENST00000470086	LACTB	P83111	547 aa	Predicted RBP	10.77	□□□□□ -0.69
LSM2-210	ENST00000470086	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	10.77	□□□□□ -0.69
LSM2-210	ENST00000470086	DEFB123	Q8N688	67 aa		10.77	□□□□□ -0.69
LSM2-210	ENST00000470086	PLBD2	Q8NHP8	589 aa		10.77	□□□□□ -0.69
LSM2-210	ENST00000470086	TAOK2	Q9UL54	1235 aa		10.77	□□□□□ -0.69
LSM2-210	ENST00000470086	ADGRA2	Q96PE1	1338 aa		10.77	□□□□□ -0.69
LSM2-210	ENST00000470086	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.76	□□□□□ -0.69
LSM2-210	ENST00000470086	CCL15-CCL14	A0A0B4J2E2	113 aa		10.76	□□□□□ -0.69
LSM2-210	ENST00000470086	SEC24B	O95487	1268 aa		10.76	□□□□□ -0.69
LSM2-210	ENST00000470086	INHBE	P58166	350 aa		10.76	□□□□□ -0.69
LSM2-210	ENST00000470086	CCL15	Q16663	113 aa		10.76	□□□□□ -0.69
LSM2-210	ENST00000470086	STRIP1	Q5VSL9	837 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms