RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 ANO10Q9NW15 660 aa15.97■□□□□ 0.15
BRCA1-209ENST00000470026 HPS5Q9UPZ3 1129 aa15.97■□□□□ 0.15
BRCA1-209ENST00000470026 KINO60870 393 aaKnown RBP15.96■□□□□ 0.15
BRCA1-209ENST00000470026 ADORA1P30542 326 aa15.96■□□□□ 0.15
BRCA1-209ENST00000470026 IMMTQ16891 758 aaKnown RBP15.96■□□□□ 0.15
BRCA1-209ENST00000470026 CHST3Q7LGC8 479 aa15.96■□□□□ 0.15
BRCA1-209ENST00000470026 DRC7Q8IY82 874 aa15.96■□□□□ 0.15
BRCA1-209ENST00000470026 FSIP1Q8NA03 581 aa15.96■□□□□ 0.15
BRCA1-209ENST00000470026 LINC00301Q8NCQ3 95 aa15.96■□□□□ 0.15
BRCA1-209ENST00000470026 ANKRD7Q92527 254 aa15.96■□□□□ 0.15
BRCA1-209ENST00000470026 CARD10Q9BWT7 1032 aa15.96■□□□□ 0.15
BRCA1-209ENST00000470026 PCDHA7Q9UN72 937 aa15.96■□□□□ 0.15
BRCA1-209ENST00000470026 XIRP1Q702N8 1843 aaKnown RBP15.96■□□□□ 0.15
BRCA1-209ENST00000470026 C4AP0C0L4 1744 aa15.96■□□□□ 0.14
BRCA1-209ENST00000470026 C4BP0C0L5 1744 aa15.96■□□□□ 0.14
BRCA1-209ENST00000470026 RIC1Q4ADV7 1423 aa15.95■□□□□ 0.14
BRCA1-209ENST00000470026 GOLGA6L19H0YKK7 550 aa15.95■□□□□ 0.14
BRCA1-209ENST00000470026 NEMFO60524 1076 aa15.95■□□□□ 0.14
BRCA1-209ENST00000470026 YEATS4O95619 227 aa15.95■□□□□ 0.14
BRCA1-209ENST00000470026 FGAP02671 866 aa15.95■□□□□ 0.14
BRCA1-209ENST00000470026 RBM6P78332 1123 aaKnown RBP15.95■□□□□ 0.14
BRCA1-209ENST00000470026 TTC39AQ5SRH9 613 aa15.95■□□□□ 0.14
BRCA1-209ENST00000470026 MRPS27Q92552 414 aaKnown RBP15.95■□□□□ 0.14
BRCA1-209ENST00000470026 GPHNQ9NQX3 736 aaPredicted RBP15.95■□□□□ 0.14
BRCA1-209ENST00000470026 POLR3EQ9NVU0 708 aa15.95■□□□□ 0.14
BRCA1-209ENST00000470026 AKAP11Q9UKA4 1901 aa15.95■□□□□ 0.14
BRCA1-209ENST00000470026 IL2RBP14784 551 aa15.95■□□□□ 0.14
BRCA1-209ENST00000470026 FOSBP53539 338 aa15.95■□□□□ 0.14
BRCA1-209ENST00000470026 ANTXR2P58335 489 aa15.95■□□□□ 0.14
BRCA1-209ENST00000470026 FKBP4Q02790 459 aaKnown RBP eCLIP15.95■□□□□ 0.14
BRCA1-209ENST00000470026 SCARF1Q14162 830 aa15.95■□□□□ 0.14
BRCA1-209ENST00000470026 TOM1L2Q6ZVM7 507 aa15.95■□□□□ 0.14
BRCA1-209ENST00000470026 FBXO18Q8NFZ0 1043 aa15.95■□□□□ 0.14
BRCA1-209ENST00000470026 NEDD4P46934 1319 aa15.95■□□□□ 0.14
BRCA1-209ENST00000470026 ATRNO75882 1429 aa15.94■□□□□ 0.14
BRCA1-209ENST00000470026 ME1P48163 572 aa15.94■□□□□ 0.14
BRCA1-209ENST00000470026 GUCY1B3Q02153 619 aa15.94■□□□□ 0.14
BRCA1-209ENST00000470026 SYCP1Q15431 976 aa15.94■□□□□ 0.14
BRCA1-209ENST00000470026 LRRC8AQ8IWT6 810 aa15.94■□□□□ 0.14
BRCA1-209ENST00000470026 ZNF512BQ96KM6 892 aaPredicted RBP15.94■□□□□ 0.14
BRCA1-209ENST00000470026 ZMYND15Q9H091 742 aa15.94■□□□□ 0.14
BRCA1-209ENST00000470026 ABCA3Q99758 1704 aa15.94■□□□□ 0.14
BRCA1-209ENST00000470026 PRC1O43663 620 aa15.94■□□□□ 0.14
BRCA1-209ENST00000470026 DHX16O60231 1041 aaKnown RBP15.94■□□□□ 0.14
BRCA1-209ENST00000470026 BRAPQ7Z569 592 aa15.94■□□□□ 0.14
BRCA1-209ENST00000470026 ZBTB38Q8NAP3 1195 aaPredicted RBP15.94■□□□□ 0.14
BRCA1-209ENST00000470026 KCNG4Q8TDN1 519 aa15.94■□□□□ 0.14
BRCA1-209ENST00000470026 PRDM11Q9NQV5 511 aa15.94■□□□□ 0.14
BRCA1-209ENST00000470026 CDHR2Q9BYE9 1310 aa15.94■□□□□ 0.14
BRCA1-209ENST00000470026 ZAP70P43403 619 aa15.93■□□□□ 0.14
BRCA1-209ENST00000470026 BRINP3Q76B58 766 aa15.93■□□□□ 0.14
BRCA1-209ENST00000470026 NCOA7Q8NI08 942 aa15.93■□□□□ 0.14
BRCA1-209ENST00000470026 BPIFA3Q9BQP9 254 aa15.93■□□□□ 0.14
BRCA1-209ENST00000470026 PUS7LQ9H0K6 701 aaKnown RBP15.93■□□□□ 0.14
BRCA1-209ENST00000470026 KCND1Q9NSA2 647 aa15.93■□□□□ 0.14
BRCA1-209ENST00000470026 SMTNL1A8MU46 457 aa15.92■□□□□ 0.14
BRCA1-209ENST00000470026 WASHC4Q2M389 1173 aa15.92■□□□□ 0.14
BRCA1-209ENST00000470026 CEP57L1Q8IYX8 460 aa15.92■□□□□ 0.14
BRCA1-209ENST00000470026 C8orf76Q96K31 380 aa15.92■□□□□ 0.14
BRCA1-209ENST00000470026 RIPOR2Q9Y4F9 1068 aa15.92■□□□□ 0.14
BRCA1-209ENST00000470026 SOS2Q07890 1332 aaPredicted RBP15.92■□□□□ 0.14
BRCA1-209ENST00000470026 KLF18A0A0U1RQI7 1052 aa15.92■□□□□ 0.14
BRCA1-209ENST00000470026 MYSM1Q5VVJ2 828 aa15.92■□□□□ 0.14
BRCA1-209ENST00000470026 TEX13AQ9BXU3 409 aaPredicted RBP15.92■□□□□ 0.14
BRCA1-209ENST00000470026 NAP1L2Q9ULW6 460 aaPredicted RBP15.92■□□□□ 0.14
BRCA1-209ENST00000470026 GPAA1O43292 621 aa15.91■□□□□ 0.14
BRCA1-209ENST00000470026 HAND2P61296 217 aa15.91■□□□□ 0.14
BRCA1-209ENST00000470026 GORABQ5T7V8 394 aa15.91■□□□□ 0.14
BRCA1-209ENST00000470026 ORC3Q9UBD5 711 aaPredicted RBP15.91■□□□□ 0.14
BRCA1-209ENST00000470026 PAXBP1Q9Y5B6 917 aa15.91■□□□□ 0.14
BRCA1-209ENST00000470026 CLIC4Q9Y696 253 aa15.91■□□□□ 0.14
BRCA1-209ENST00000470026 BECN2A8MW95 431 aa15.91■□□□□ 0.14
BRCA1-209ENST00000470026 TNNT1P13805 278 aa15.91■□□□□ 0.14
BRCA1-209ENST00000470026 NDUFA8P51970 172 aa15.91■□□□□ 0.14
BRCA1-209ENST00000470026 IFIT5Q13325 482 aaKnown RBP15.91■□□□□ 0.14
BRCA1-209ENST00000470026 SMAP1Q8IYB5 467 aaPredicted RBP15.91■□□□□ 0.14
BRCA1-209ENST00000470026 NBPF3Q9H094 633 aa15.91■□□□□ 0.14
BRCA1-209ENST00000470026 NAT10Q9H0A0 1025 aaKnown RBP15.91■□□□□ 0.14
BRCA1-209ENST00000470026 KIAA1468Q9P260 1216 aa15.91■□□□□ 0.14
BRCA1-209ENST00000470026 GOLGA8BA8MQT2 603 aa15.9■□□□□ 0.14
BRCA1-209ENST00000470026 PPFIA3O75145 1194 aa15.9■□□□□ 0.14
BRCA1-209ENST00000470026 ADD2P35612 726 aa15.9■□□□□ 0.14
BRCA1-209ENST00000470026 KIF23Q02241 960 aaPredicted RBP15.9■□□□□ 0.14
BRCA1-209ENST00000470026 OTUD7BQ6GQQ9 843 aa15.9■□□□□ 0.14
BRCA1-209ENST00000470026 VGLL2Q8N8G2 317 aa15.9■□□□□ 0.14
BRCA1-209ENST00000470026 FAM89AQ96GI7 184 aa15.9■□□□□ 0.14
BRCA1-209ENST00000470026 MAP3K15Q6ZN16 1313 aa15.89■□□□□ 0.14
BRCA1-209ENST00000470026 A0A1B0GVL5 298 aa15.89■□□□□ 0.13
BRCA1-209ENST00000470026 FAM177BA6PVY3 158 aa15.89■□□□□ 0.13
BRCA1-209ENST00000470026 ZNF213O14771 459 aa15.89■□□□□ 0.13
BRCA1-209ENST00000470026 SPTLC2O15270 562 aa15.89■□□□□ 0.13
BRCA1-209ENST00000470026 MCAMP43121 646 aa15.89■□□□□ 0.13
BRCA1-209ENST00000470026 CCZ1BP86790 482 aa15.89■□□□□ 0.13
BRCA1-209ENST00000470026 CCZ1P86791 482 aaPredicted RBP15.89■□□□□ 0.13
BRCA1-209ENST00000470026 STK38Q15208 465 aa15.89■□□□□ 0.13
BRCA1-209ENST00000470026 ATP2B3Q16720 1220 aa15.89■□□□□ 0.13
BRCA1-209ENST00000470026 AXDND1Q5T1B0 1012 aaPredicted RBP15.89■□□□□ 0.13
BRCA1-209ENST00000470026 GIGYF2Q6Y7W6 1299 aaKnown RBP15.89■□□□□ 0.13
BRCA1-209ENST00000470026 C16orf45Q96MC5 204 aaPredicted RBP15.89■□□□□ 0.13
BRCA1-209ENST00000470026 OSBPL5Q9H0X9 879 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms