RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 SIL1Q9H173 461 aa11.63□□□□□ -0.55
SHROOM3-203ENST00000469923 GBA2Q9HCG7 927 aaPredicted RBP11.63□□□□□ -0.55
SHROOM3-203ENST00000469923 KIF23Q02241 960 aaPredicted RBP11.62□□□□□ -0.55
SHROOM3-203ENST00000469923 MKRN3Q13064 507 aaKnown RBP11.62□□□□□ -0.55
SHROOM3-203ENST00000469923 ALDH1L2Q3SY69 923 aa11.62□□□□□ -0.55
SHROOM3-203ENST00000469923 TNS4Q8IZW8 715 aa11.62□□□□□ -0.55
SHROOM3-203ENST00000469923 TDRD7Q8NHU6 1098 aaKnown RBP11.62□□□□□ -0.55
SHROOM3-203ENST00000469923 LRRFIP2Q9Y608 721 aaKnown RBP11.62□□□□□ -0.55
SHROOM3-203ENST00000469923 ZNF646O15015 1829 aaPredicted RBP11.62□□□□□ -0.55
SHROOM3-203ENST00000469923 CACNA1FO60840 1977 aa11.61□□□□□ -0.55
SHROOM3-203ENST00000469923 ADORA1P30542 326 aa11.61□□□□□ -0.55
SHROOM3-203ENST00000469923 HNRNPUQ00839 825 aaKnown RBP eCLIP11.61□□□□□ -0.55
SHROOM3-203ENST00000469923 CHAF1AQ13111 956 aaPredicted RBP11.61□□□□□ -0.55
SHROOM3-203ENST00000469923 CFAP100Q494V2 611 aa11.61□□□□□ -0.55
SHROOM3-203ENST00000469923 R3HDMLQ9H3Y0 253 aa11.61□□□□□ -0.55
SHROOM3-203ENST00000469923 PTPRCP08575 1304 aa11.6□□□□□ -0.55
SHROOM3-203ENST00000469923 RLBP1P12271 317 aa11.6□□□□□ -0.55
SHROOM3-203ENST00000469923 FGFR2P21802 821 aa11.6□□□□□ -0.55
SHROOM3-203ENST00000469923 HIBADHP31937 336 aaKnown RBP11.6□□□□□ -0.55
SHROOM3-203ENST00000469923 CACNB3P54284 484 aa11.6□□□□□ -0.55
SHROOM3-203ENST00000469923 METTL24Q5JXM2 366 aa11.6□□□□□ -0.55
SHROOM3-203ENST00000469923 RGMBQ6NW40 437 aa11.6□□□□□ -0.55
SHROOM3-203ENST00000469923 SULF1Q8IWU6 871 aa11.6□□□□□ -0.55
SHROOM3-203ENST00000469923 FRAT1Q92837 279 aaPredicted RBP11.6□□□□□ -0.55
SHROOM3-203ENST00000469923 CSRNP1Q96S65 589 aa11.6□□□□□ -0.55
SHROOM3-203ENST00000469923 TRPM7Q96QT4 1865 aa11.59□□□□□ -0.55
SHROOM3-203ENST00000469923 SLURP2P0DP57 97 aa11.59□□□□□ -0.55
SHROOM3-203ENST00000469923 ZNF157P51786 506 aaPredicted RBP11.59□□□□□ -0.55
SHROOM3-203ENST00000469923 TIMM10P62072 90 aa11.59□□□□□ -0.55
SHROOM3-203ENST00000469923 UBE4AQ14139 1066 aa11.59□□□□□ -0.55
SHROOM3-203ENST00000469923 NBPF12Q5TAG4 269 aaPredicted RBP11.59□□□□□ -0.55
SHROOM3-203ENST00000469923 C2orf69Q8N8R5 385 aa11.59□□□□□ -0.55
SHROOM3-203ENST00000469923 CLMNQ96JQ2 1002 aa11.59□□□□□ -0.55
SHROOM3-203ENST00000469923 EYA2O00167 538 aa11.58□□□□□ -0.56
SHROOM3-203ENST00000469923 PDE8BO95263 885 aa11.58□□□□□ -0.56
SHROOM3-203ENST00000469923 TRIM27P14373 513 aa11.58□□□□□ -0.56
SHROOM3-203ENST00000469923 CTCFP49711 727 aaPredicted RBP11.58□□□□□ -0.56
SHROOM3-203ENST00000469923 TDRD3Q9H7E2 651 aaKnown RBP11.58□□□□□ -0.56
SHROOM3-203ENST00000469923 C1orf115Q9H7X2 142 aa11.58□□□□□ -0.56
SHROOM3-203ENST00000469923 FAM205AQ6ZU69 1335 aa11.58□□□□□ -0.56
SHROOM3-203ENST00000469923 PNMA6EA0A0J9YXQ4 647 aa11.57□□□□□ -0.56
SHROOM3-203ENST00000469923 TRPA1O75762 1119 aa11.57□□□□□ -0.56
SHROOM3-203ENST00000469923 BRPF1P55201 1214 aaPredicted RBP11.57□□□□□ -0.56
SHROOM3-203ENST00000469923 DLGAP5Q15398 846 aa11.57□□□□□ -0.56
SHROOM3-203ENST00000469923 MFSD14BQ5SR56 506 aa11.57□□□□□ -0.56
SHROOM3-203ENST00000469923 ZNF804AQ7Z570 1209 aa11.57□□□□□ -0.56
SHROOM3-203ENST00000469923 TMEM57Q8N5G2 664 aa11.57□□□□□ -0.56
SHROOM3-203ENST00000469923 DEFB129Q9H1M3 183 aa11.57□□□□□ -0.56
SHROOM3-203ENST00000469923 SPDYE2BA6NHP3 402 aa11.56□□□□□ -0.56
SHROOM3-203ENST00000469923 UBTFL1P0CB47 393 aaPredicted RBP11.56□□□□□ -0.56
SHROOM3-203ENST00000469923 SPDYE6P0CI01 402 aa11.56□□□□□ -0.56
SHROOM3-203ENST00000469923 GJA5P36382 358 aa11.56□□□□□ -0.56
SHROOM3-203ENST00000469923 MAP2K2P36507 400 aa11.56□□□□□ -0.56
SHROOM3-203ENST00000469923 ECE1P42892 770 aa11.56□□□□□ -0.56
SHROOM3-203ENST00000469923 RBM5P52756 815 aaKnown RBP eCLIP11.56□□□□□ -0.56
SHROOM3-203ENST00000469923 INTS3Q68E01 1043 aaKnown RBP11.56□□□□□ -0.56
SHROOM3-203ENST00000469923 RASAL3Q86YV0 1011 aa11.56□□□□□ -0.56
SHROOM3-203ENST00000469923 OGFOD1Q8N543 542 aa11.56□□□□□ -0.56
SHROOM3-203ENST00000469923 CNKSR2Q8WXI2 1034 aa11.56□□□□□ -0.56
SHROOM3-203ENST00000469923 VEZTQ9HBM0 779 aa11.56□□□□□ -0.56
SHROOM3-203ENST00000469923 RNF186Q9NXI6 227 aa11.56□□□□□ -0.56
SHROOM3-203ENST00000469923 ZNF70Q9UC06 446 aaPredicted RBP11.56□□□□□ -0.56
SHROOM3-203ENST00000469923 TTF2Q9UNY4 1162 aaKnown RBP11.56□□□□□ -0.56
SHROOM3-203ENST00000469923 CASP8AP2Q9UKL3 1982 aa11.56□□□□□ -0.56
SHROOM3-203ENST00000469923 ZNF609O15014 1411 aa11.55□□□□□ -0.56
SHROOM3-203ENST00000469923 A0A1B0GUL6 1792 aa11.55□□□□□ -0.56
SHROOM3-203ENST00000469923 TCP10L2B9ZVM9 353 aa11.55□□□□□ -0.56
SHROOM3-203ENST00000469923 USP2O75604 605 aaPredicted RBP11.55□□□□□ -0.56
SHROOM3-203ENST00000469923 SLC10A3P09131 477 aa11.55□□□□□ -0.56
SHROOM3-203ENST00000469923 PHKA1P46020 1223 aa11.55□□□□□ -0.56
SHROOM3-203ENST00000469923 MAP2K1Q02750 393 aaPredicted RBP11.55□□□□□ -0.56
SHROOM3-203ENST00000469923 TFCP2Q12800 502 aa11.55□□□□□ -0.56
SHROOM3-203ENST00000469923 TTLL12Q14166 644 aaPredicted RBP11.55□□□□□ -0.56
SHROOM3-203ENST00000469923 RASA3Q14644 834 aa11.55□□□□□ -0.56
SHROOM3-203ENST00000469923 ZFPM1Q8IX07 1006 aa11.55□□□□□ -0.56
SHROOM3-203ENST00000469923 DZIP1LQ8IYY4 767 aaKnown RBP11.55□□□□□ -0.56
SHROOM3-203ENST00000469923 AIDAQ96BJ3 306 aa11.55□□□□□ -0.56
SHROOM3-203ENST00000469923 API5Q9BZZ5 524 aaKnown RBP11.55□□□□□ -0.56
SHROOM3-203ENST00000469923 TMEM39BQ9GZU3 492 aa11.55□□□□□ -0.56
SHROOM3-203ENST00000469923 PRDM10Q9NQV6 1147 aa11.55□□□□□ -0.56
SHROOM3-203ENST00000469923 PSME4Q14997 1843 aa11.55□□□□□ -0.56
SHROOM3-203ENST00000469923 MROH5Q6ZUA9 1318 aa11.55□□□□□ -0.56
SHROOM3-203ENST00000469923 SSC5DA1L4H1 1573 aa11.54□□□□□ -0.56
SHROOM3-203ENST00000469923 TBC1D8O95759 1140 aa11.54□□□□□ -0.56
SHROOM3-203ENST00000469923 DIXDC1Q155Q3 683 aa11.54□□□□□ -0.56
SHROOM3-203ENST00000469923 LDLRAD1Q5T700 205 aa11.54□□□□□ -0.56
SHROOM3-203ENST00000469923 APOBEC3HQ6NTF7 200 aaKnown RBP11.54□□□□□ -0.56
SHROOM3-203ENST00000469923 MTMR14Q8NCE2 650 aa11.54□□□□□ -0.56
SHROOM3-203ENST00000469923 PANK1Q8TE04 598 aa11.54□□□□□ -0.56
SHROOM3-203ENST00000469923 HHIPL1Q96JK4 782 aa11.54□□□□□ -0.56
SHROOM3-203ENST00000469923 TEPSINQ96N21 525 aa11.54□□□□□ -0.56
SHROOM3-203ENST00000469923 ANGEL1Q9UNK9 670 aaKnown RBP11.54□□□□□ -0.56
SHROOM3-203ENST00000469923 COL1A1P02452 1464 aaPredicted RBP11.54□□□□□ -0.56
SHROOM3-203ENST00000469923 CRKP46108 304 aa11.53□□□□□ -0.56
SHROOM3-203ENST00000469923 CAP1Q01518 475 aa11.53□□□□□ -0.56
SHROOM3-203ENST00000469923 PI16Q6UXB8 463 aa11.53□□□□□ -0.56
SHROOM3-203ENST00000469923 ATF7IPQ6VMQ6 1270 aa11.53□□□□□ -0.56
SHROOM3-203ENST00000469923 PITPNM2Q9BZ72 1349 aa11.53□□□□□ -0.56
SHROOM3-203ENST00000469923 SRGAP3O43295 1099 aa11.52□□□□□ -0.57
SHROOM3-203ENST00000469923 PUM3Q15397 648 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms