RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 CENPQQ7L2Z9 268 aaPredicted RBP18.14■□□□□ 0.49
COL9A3-209ENST00000469852 SKAP1Q86WV1 359 aa18.14■□□□□ 0.49
COL9A3-209ENST00000469852 PDE4AP27815 886 aa18.13■□□□□ 0.49
COL9A3-209ENST00000469852 MCAMP43121 646 aa18.13■□□□□ 0.49
COL9A3-209ENST00000469852 GTF2IP78347 998 aa18.13■□□□□ 0.49
COL9A3-209ENST00000469852 TTC39AQ5SRH9 613 aa18.13■□□□□ 0.49
COL9A3-209ENST00000469852 FBXW7Q969H0 707 aa18.13■□□□□ 0.49
COL9A3-209ENST00000469852 NDUFB9Q9Y6M9 179 aa18.13■□□□□ 0.49
COL9A3-209ENST00000469852 EIF6P56537 245 aaKnown RBP18.12■□□□□ 0.49
COL9A3-209ENST00000469852 CHAF1AQ13111 956 aaPredicted RBP18.12■□□□□ 0.49
COL9A3-209ENST00000469852 CCDC158Q5M9N0 1113 aa18.12■□□□□ 0.49
COL9A3-209ENST00000469852 DACT2Q5SW24 774 aa18.12■□□□□ 0.49
COL9A3-209ENST00000469852 CIAPIN1Q6FI81 312 aa18.12■□□□□ 0.49
COL9A3-209ENST00000469852 CERS5Q8N5B7 392 aa18.12■□□□□ 0.49
COL9A3-209ENST00000469852 HMG20BQ9P0W2 317 aa18.12■□□□□ 0.49
COL9A3-209ENST00000469852 USP17L3A6NCW0 530 aa18.11■□□□□ 0.49
COL9A3-209ENST00000469852 USP17L4A6NCW7 530 aa18.11■□□□□ 0.49
COL9A3-209ENST00000469852 DDNO94850 711 aaPredicted RBP18.11■□□□□ 0.49
COL9A3-209ENST00000469852 IFFO2Q5TF58 517 aa18.11■□□□□ 0.49
COL9A3-209ENST00000469852 TTLL5Q6EMB2 1281 aa18.11■□□□□ 0.49
COL9A3-209ENST00000469852 USP17L1Q7RTZ2 530 aa18.11■□□□□ 0.49
COL9A3-209ENST00000469852 SNRKQ9NRH2 765 aa18.11■□□□□ 0.49
COL9A3-209ENST00000469852 ZBTB12Q9Y330 459 aaPredicted RBP18.11■□□□□ 0.49
COL9A3-209ENST00000469852 GJA3Q9Y6H8 435 aa18.11■□□□□ 0.49
COL9A3-209ENST00000469852 FAM205AQ6ZU69 1335 aa18.11■□□□□ 0.49
COL9A3-209ENST00000469852 ZC3H4Q9UPT8 1303 aaKnown RBP18.11■□□□□ 0.49
COL9A3-209ENST00000469852 MYO5AQ9Y4I1 1855 aaKnown RBP18.11■□□□□ 0.49
COL9A3-209ENST00000469852 FRAT2O75474 233 aaPredicted RBP18.1■□□□□ 0.49
COL9A3-209ENST00000469852 VIL1P09327 827 aaKnown RBP18.1■□□□□ 0.49
COL9A3-209ENST00000469852 GRIK5Q16478 980 aa18.1■□□□□ 0.49
COL9A3-209ENST00000469852 STRIP1Q5VSL9 837 aa18.1■□□□□ 0.49
COL9A3-209ENST00000469852 ZNF512BQ96KM6 892 aaPredicted RBP18.1■□□□□ 0.49
COL9A3-209ENST00000469852 GNL3LQ9NVN8 582 aaKnown RBP18.1■□□□□ 0.49
COL9A3-209ENST00000469852 ZBTB47Q9UFB7 747 aaPredicted RBP18.1■□□□□ 0.49
COL9A3-209ENST00000469852 ZBTB22O15209 634 aa18.09■□□□□ 0.49
COL9A3-209ENST00000469852 UQCRFS1P1P0C7P4 283 aa18.09■□□□□ 0.49
COL9A3-209ENST00000469852 MX1P20591 662 aa18.09■□□□□ 0.49
COL9A3-209ENST00000469852 SPATA5Q8NB90 893 aa18.09■□□□□ 0.49
COL9A3-209ENST00000469852 NMRK2Q9NPI5 230 aa18.09■□□□□ 0.49
COL9A3-209ENST00000469852 ECHDC1Q9NTX5 307 aa18.09■□□□□ 0.49
COL9A3-209ENST00000469852 DENND2AQ9ULE3 1009 aa18.09■□□□□ 0.49
COL9A3-209ENST00000469852 SHTN1A0MZ66 631 aa18.08■□□□□ 0.48
COL9A3-209ENST00000469852 SEMA3EO15041 775 aa18.08■□□□□ 0.48
COL9A3-209ENST00000469852 TOMM70O94826 608 aa18.08■□□□□ 0.48
COL9A3-209ENST00000469852 ATP5JP18859 108 aa18.08■□□□□ 0.48
COL9A3-209ENST00000469852 ZAP70P43403 619 aa18.08■□□□□ 0.48
COL9A3-209ENST00000469852 TNIP1Q15025 636 aa18.08■□□□□ 0.48
COL9A3-209ENST00000469852 RSBN1LQ6PCB5 846 aaPredicted RBP18.08■□□□□ 0.48
COL9A3-209ENST00000469852 PLEKHM2Q8IWE5 1019 aa18.08■□□□□ 0.48
COL9A3-209ENST00000469852 GPC2Q8N158 579 aa18.08■□□□□ 0.48
COL9A3-209ENST00000469852 PI4K2BQ8TCG2 481 aa18.08■□□□□ 0.48
COL9A3-209ENST00000469852 GTF3C3Q9Y5Q9 886 aa18.08■□□□□ 0.48
COL9A3-209ENST00000469852 ADAMTSL1Q8N6G6 1762 aa18.07■□□□□ 0.48
COL9A3-209ENST00000469852 PDS5AQ29RF7 1337 aaKnown RBP18.07■□□□□ 0.48
COL9A3-209ENST00000469852 GLTPD2A6NH11 291 aa18.07■□□□□ 0.48
COL9A3-209ENST00000469852 GMPSP49915 693 aaPredicted RBP18.07■□□□□ 0.48
COL9A3-209ENST00000469852 PDE1AP54750 535 aa18.07■□□□□ 0.48
COL9A3-209ENST00000469852 MFSD14BQ5SR56 506 aa18.07■□□□□ 0.48
COL9A3-209ENST00000469852 TBC1D9Q6ZT07 1266 aa18.07■□□□□ 0.48
COL9A3-209ENST00000469852 EDC3Q96F86 508 aaKnown RBP18.07■□□□□ 0.48
COL9A3-209ENST00000469852 GMLQ99445 158 aa18.07■□□□□ 0.48
COL9A3-209ENST00000469852 BOLA2Q9H3K6 86 aa18.07■□□□□ 0.48
COL9A3-209ENST00000469852 STAP2Q9UGK3 403 aa18.07■□□□□ 0.48
COL9A3-209ENST00000469852 WDR90Q96KV7 1748 aa18.06■□□□□ 0.48
COL9A3-209ENST00000469852 TTC41PQ6P2S7 1318 aa18.06■□□□□ 0.48
COL9A3-209ENST00000469852 CYP2E1P05181 493 aaPredicted RBP18.06■□□□□ 0.48
COL9A3-209ENST00000469852 SCNN1DP51172 638 aa18.06■□□□□ 0.48
COL9A3-209ENST00000469852 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.06■□□□□ 0.48
COL9A3-209ENST00000469852 ANTXR1Q9H6X2 564 aa18.06■□□□□ 0.48
COL9A3-209ENST00000469852 DOCK2Q92608 1830 aa18.06■□□□□ 0.48
COL9A3-209ENST00000469852 PRDX5P30044 214 aa18.05■□□□□ 0.48
COL9A3-209ENST00000469852 DPY19L2Q6NUT2 758 aa18.05■□□□□ 0.48
COL9A3-209ENST00000469852 DNAJC2Q99543 621 aaKnown RBP18.05■□□□□ 0.48
COL9A3-209ENST00000469852 PIH1D3Q9NQM4 214 aaKnown RBP18.05■□□□□ 0.48
COL9A3-209ENST00000469852 SALL1Q9NSC2 1324 aa18.04■□□□□ 0.48
COL9A3-209ENST00000469852 POTECB2RU33 542 aa18.04■□□□□ 0.48
COL9A3-209ENST00000469852 F8W031 263 aaPredicted RBP18.04■□□□□ 0.48
COL9A3-209ENST00000469852 MAP4K4O95819 1239 aaPredicted RBP18.04■□□□□ 0.48
COL9A3-209ENST00000469852 APLP1P51693 650 aa18.04■□□□□ 0.48
COL9A3-209ENST00000469852 FKBP1AP62942 108 aaKnown RBP18.04■□□□□ 0.48
COL9A3-209ENST00000469852 KIAA0825Q8IV33 1275 aa18.04■□□□□ 0.48
COL9A3-209ENST00000469852 WDR66Q8TBY9 1149 aa18.04■□□□□ 0.48
COL9A3-209ENST00000469852 GPATCH3Q96I76 525 aa18.04■□□□□ 0.48
COL9A3-209ENST00000469852 HAUS7Q99871 368 aa18.04■□□□□ 0.48
COL9A3-209ENST00000469852 DNAJC5GQ8N7S2 189 aa18.03■□□□□ 0.48
COL9A3-209ENST00000469852 AGBL3Q8NEM8 1001 aa18.03■□□□□ 0.48
COL9A3-209ENST00000469852 TBC1D22AQ8WUA7 517 aa18.03■□□□□ 0.48
COL9A3-209ENST00000469852 L3MBTL3Q96JM7 780 aaPredicted RBP18.03■□□□□ 0.48
COL9A3-209ENST00000469852 ABCF2Q9UG63 623 aa18.03■□□□□ 0.48
COL9A3-209ENST00000469852 GOLIM4O00461 696 aa18.02■□□□□ 0.48
COL9A3-209ENST00000469852 RPS12P25398 132 aaKnown RBP18.02■□□□□ 0.48
COL9A3-209ENST00000469852 EPS15P42566 896 aa18.02■□□□□ 0.48
COL9A3-209ENST00000469852 ZNF384Q8TF68 577 aa18.02■□□□□ 0.48
COL9A3-209ENST00000469852 OSBPL3Q9H4L5 887 aa18.02■□□□□ 0.48
COL9A3-209ENST00000469852 GPRC5DQ9NZD1 345 aa18.02■□□□□ 0.48
COL9A3-209ENST00000469852 PCDHAC2Q9Y5I4 1007 aa18.02■□□□□ 0.48
COL9A3-209ENST00000469852 MAST2Q6P0Q8 1798 aa18.02■□□□□ 0.47
COL9A3-209ENST00000469852 MYO3BQ8WXR4 1341 aa18.01■□□□□ 0.47
COL9A3-209ENST00000469852 SCN4AP35499 1836 aa18.01■□□□□ 0.47
COL9A3-209ENST00000469852 GLRX3O76003 335 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms