RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 SH2B1Q9NRF2 756 aaPredicted RBP6.75□□□□□ -1.33
VPS8-220ENST00000469713 PPM1HQ9ULR3 514 aa6.75□□□□□ -1.33
VPS8-220ENST00000469713 SOX13Q9UN79 622 aa6.75□□□□□ -1.33
VPS8-220ENST00000469713 M0R082 166 aa6.74□□□□□ -1.33
VPS8-220ENST00000469713 FAAP100Q0VG06 881 aa6.74□□□□□ -1.33
VPS8-220ENST00000469713 KANK3Q6NY19 840 aa6.74□□□□□ -1.33
VPS8-220ENST00000469713 TPTE2Q6XPS3 522 aa6.74□□□□□ -1.33
VPS8-220ENST00000469713 VN1R5Q7Z5H4 357 aa6.74□□□□□ -1.33
VPS8-220ENST00000469713 ZNF417Q8TAU3 575 aa6.74□□□□□ -1.33
VPS8-220ENST00000469713 ZNF587Q96SQ5 575 aaPredicted RBP6.74□□□□□ -1.33
VPS8-220ENST00000469713 EPHA1P21709 976 aa6.73□□□□□ -1.33
VPS8-220ENST00000469713 AMPD1P23109 780 aa6.73□□□□□ -1.33
VPS8-220ENST00000469713 CDC27P30260 824 aa6.73□□□□□ -1.33
VPS8-220ENST00000469713 AFF1P51825 1210 aaKnown RBP6.73□□□□□ -1.33
VPS8-220ENST00000469713 SUZ12Q15022 739 aaKnown RBP6.73□□□□□ -1.33
VPS8-220ENST00000469713 NT5DC4Q86YG4 428 aa6.73□□□□□ -1.33
VPS8-220ENST00000469713 CLEC4MQ9H2X3 399 aaPredicted RBP6.73□□□□□ -1.33
VPS8-220ENST00000469713 LILRB5O75023 590 aa6.72□□□□□ -1.33
VPS8-220ENST00000469713 ERCC5P28715 1186 aaPredicted RBP6.72□□□□□ -1.33
VPS8-220ENST00000469713 CDC25BP30305 580 aa6.72□□□□□ -1.33
VPS8-220ENST00000469713 BAG6P46379 1132 aa6.72□□□□□ -1.33
VPS8-220ENST00000469713 ZNF157P51786 506 aaPredicted RBP6.72□□□□□ -1.33
VPS8-220ENST00000469713 MAP3K10Q02779 954 aa6.72□□□□□ -1.33
VPS8-220ENST00000469713 PCDH1Q08174 1060 aa6.72□□□□□ -1.33
VPS8-220ENST00000469713 RAD51AP2Q09MP3 1159 aa6.72□□□□□ -1.33
VPS8-220ENST00000469713 CCDC85BQ15834 202 aaPredicted RBP6.72□□□□□ -1.33
VPS8-220ENST00000469713 RPS26P11Q5JNZ5 115 aaPredicted RBP6.72□□□□□ -1.33
VPS8-220ENST00000469713 HS2ST1Q7LGA3 356 aa6.72□□□□□ -1.33
VPS8-220ENST00000469713 IL22RA1Q8N6P7 574 aa6.72□□□□□ -1.33
VPS8-220ENST00000469713 ANKRD24Q8TF21 1146 aa6.72□□□□□ -1.33
VPS8-220ENST00000469713 TRIM56Q9BRZ2 755 aaKnown RBP6.72□□□□□ -1.33
VPS8-220ENST00000469713 ZFYVE1Q9HBF4 777 aa6.72□□□□□ -1.33
VPS8-220ENST00000469713 SEC31BQ9NQW1 1179 aa6.72□□□□□ -1.33
VPS8-220ENST00000469713 GPN3Q9UHW5 284 aaPredicted RBP6.72□□□□□ -1.33
VPS8-220ENST00000469713 GGT7Q9UJ14 662 aa6.72□□□□□ -1.33
VPS8-220ENST00000469713 FAM177BA6PVY3 158 aa6.71□□□□□ -1.34
VPS8-220ENST00000469713 CELA3AP09093 270 aa6.71□□□□□ -1.34
VPS8-220ENST00000469713 ZNF423Q2M1K9 1284 aa6.71□□□□□ -1.34
VPS8-220ENST00000469713 ZNF385CQ66K41 422 aaPredicted RBP6.71□□□□□ -1.34
VPS8-220ENST00000469713 TXNDC11Q6PKC3 985 aa6.71□□□□□ -1.34
VPS8-220ENST00000469713 NOC4LQ9BVI4 516 aaKnown RBP6.71□□□□□ -1.34
VPS8-220ENST00000469713 CEP44Q9C0F1 390 aa6.71□□□□□ -1.34
VPS8-220ENST00000469713 COPRSQ9NQ92 184 aa6.71□□□□□ -1.34
VPS8-220ENST00000469713 LRRC4BQ9NT99 713 aa6.71□□□□□ -1.34
VPS8-220ENST00000469713 F6X3S4 739 aa6.7□□□□□ -1.34
VPS8-220ENST00000469713 ENC1O14682 589 aa6.7□□□□□ -1.34
VPS8-220ENST00000469713 ESRRAP11474 423 aaPredicted RBP6.7□□□□□ -1.34
VPS8-220ENST00000469713 CABP4P57796 275 aa6.7□□□□□ -1.34
VPS8-220ENST00000469713 IKBKEQ14164 716 aa6.7□□□□□ -1.34
VPS8-220ENST00000469713 MAP3K11Q16584 847 aa6.7□□□□□ -1.34
VPS8-220ENST00000469713 ZNF394Q53GI3 561 aa6.7□□□□□ -1.34
VPS8-220ENST00000469713 HGSNATQ68CP4 663 aa6.7□□□□□ -1.34
VPS8-220ENST00000469713 SV2BQ7L1I2 683 aa6.7□□□□□ -1.34
VPS8-220ENST00000469713 ERMP1Q7Z2K6 904 aa6.7□□□□□ -1.34
VPS8-220ENST00000469713 CACTIN-AS1Q8N1I8 211 aa6.7□□□□□ -1.34
VPS8-220ENST00000469713 NECAB3Q96P71 396 aaPredicted RBP6.7□□□□□ -1.34
VPS8-220ENST00000469713 PCDHGB7Q9Y5F8 929 aa6.7□□□□□ -1.34
VPS8-220ENST00000469713 H3BRJ5 948 aa6.69□□□□□ -1.34
VPS8-220ENST00000469713 LINC01387J3KSC0 135 aa6.69□□□□□ -1.34
VPS8-220ENST00000469713 PAGE1O75459 146 aa6.69□□□□□ -1.34
VPS8-220ENST00000469713 B3GALT4O96024 378 aa6.69□□□□□ -1.34
VPS8-220ENST00000469713 HOXB4P17483 251 aaPredicted RBP6.69□□□□□ -1.34
VPS8-220ENST00000469713 COL9A3Q14050 684 aaPredicted RBP6.69□□□□□ -1.34
VPS8-220ENST00000469713 WFDC8Q8IUA0 241 aa6.69□□□□□ -1.34
VPS8-220ENST00000469713 SVOPQ8N4V2 548 aa6.69□□□□□ -1.34
VPS8-220ENST00000469713 PRDM6Q9NQX0 595 aa6.69□□□□□ -1.34
VPS8-220ENST00000469713 TMEM39AQ9NV64 488 aa6.69□□□□□ -1.34
VPS8-220ENST00000469713 PPME1Q9Y570 386 aa6.69□□□□□ -1.34
VPS8-220ENST00000469713 SOX1O00570 391 aaPredicted RBP6.68□□□□□ -1.34
VPS8-220ENST00000469713 NID1P14543 1247 aa6.68□□□□□ -1.34
VPS8-220ENST00000469713 DGKGP49619 791 aa6.68□□□□□ -1.34
VPS8-220ENST00000469713 RACK1P63244 317 aaKnown RBP6.68□□□□□ -1.34
VPS8-220ENST00000469713 MSL1Q68DK7 614 aa6.68□□□□□ -1.34
VPS8-220ENST00000469713 USP48Q86UV5 1035 aa6.68□□□□□ -1.34
VPS8-220ENST00000469713 NEDD1Q8NHV4 660 aa6.68□□□□□ -1.34
VPS8-220ENST00000469713 TGIF2Q9GZN2 237 aa6.68□□□□□ -1.34
VPS8-220ENST00000469713 RRAGCQ9HB90 399 aa6.68□□□□□ -1.34
VPS8-220ENST00000469713 KBTBD4Q9NVX7 518 aa6.68□□□□□ -1.34
VPS8-220ENST00000469713 DDX41Q9UJV9 622 aaKnown RBP6.68□□□□□ -1.34
VPS8-220ENST00000469713 LIG3P49916 1009 aa6.67□□□□□ -1.34
VPS8-220ENST00000469713 PPP2R3AQ06190 1150 aa6.67□□□□□ -1.34
VPS8-220ENST00000469713 DMRTC2Q8IXT2 367 aaPredicted RBP6.67□□□□□ -1.34
VPS8-220ENST00000469713 SLC7A3Q8WY07 619 aa6.67□□□□□ -1.34
VPS8-220ENST00000469713 RSRP1Q9BUV0 290 aa6.67□□□□□ -1.34
VPS8-220ENST00000469713 CARD10Q9BWT7 1032 aa6.67□□□□□ -1.34
VPS8-220ENST00000469713 CCSER2Q9H7U1 834 aa6.67□□□□□ -1.34
VPS8-220ENST00000469713 SRA1Q9HD15 236 aaKnown RBP6.67□□□□□ -1.34
VPS8-220ENST00000469713 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.67□□□□□ -1.34
VPS8-220ENST00000469713 RASIP1Q5U651 963 aa6.66□□□□□ -1.34
VPS8-220ENST00000469713 PCNX4Q63HM2 1172 aa6.66□□□□□ -1.34
VPS8-220ENST00000469713 TTBK2Q6IQ55 1244 aa6.66□□□□□ -1.34
VPS8-220ENST00000469713 STK35Q8TDR2 534 aa6.66□□□□□ -1.34
VPS8-220ENST00000469713 ACBD3Q9H3P7 528 aa6.66□□□□□ -1.34
VPS8-220ENST00000469713 TLR6Q9Y2C9 796 aa6.66□□□□□ -1.34
VPS8-220ENST00000469713 MINDY4BA8MYZ0 360 aa6.65□□□□□ -1.34
VPS8-220ENST00000469713 FSCN2O14926 492 aa6.65□□□□□ -1.34
VPS8-220ENST00000469713 ARHGEF15O94989 841 aa6.65□□□□□ -1.34
VPS8-220ENST00000469713 GBP2P32456 591 aaPredicted RBP6.65□□□□□ -1.34
VPS8-220ENST00000469713 ZC3H6P61129 1189 aaKnown RBP6.65□□□□□ -1.34
VPS8-220ENST00000469713 SNRPNP63162 240 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms